RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 SLURP2P0DP57 97 aa17.09■□□□□ 0.33
SEMA3F-208ENST00000470737 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
SEMA3F-208ENST00000470737 G3BP1Q13283 466 aaKnown RBP eCLIP17.09■□□□□ 0.33
SEMA3F-208ENST00000470737 MTX1Q13505 466 aa17.09■□□□□ 0.33
SEMA3F-208ENST00000470737 FAM110CQ1W6H9 321 aa17.09■□□□□ 0.33
SEMA3F-208ENST00000470737 UBE2Q1Q7Z7E8 422 aa17.09■□□□□ 0.33
SEMA3F-208ENST00000470737 CCDC84Q86UT8 332 aaPredicted RBP17.09■□□□□ 0.33
SEMA3F-208ENST00000470737 HMG20BQ9P0W2 317 aa17.09■□□□□ 0.33
SEMA3F-208ENST00000470737 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.09■□□□□ 0.33
SEMA3F-208ENST00000470737 COL2A1P02458 1487 aaPredicted RBP17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 FAM196BA6NMK8 535 aa17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 IPO8O15397 1037 aaKnown RBP17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 GCLCP48506 637 aaPredicted RBP17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 SPP2Q13103 211 aa17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 TREML2Q5T2D2 321 aa17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 TEX11Q8IYF3 940 aa17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 ZNF280CQ8ND82 737 aa17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 NSUN4Q96CB9 384 aaKnown RBP17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 DEFB118Q96PH6 123 aa17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 AS3MTQ9HBK9 375 aa17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 LRP2BPQ9P2M1 347 aa17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.32
SEMA3F-208ENST00000470737 LOC285556D6RIA3 1793 aa17.07■□□□□ 0.32
SEMA3F-208ENST00000470737 EVI5O60447 810 aa17.07■□□□□ 0.32
SEMA3F-208ENST00000470737 GNAI2P04899 355 aa17.07■□□□□ 0.32
SEMA3F-208ENST00000470737 UQCRFS1P1P0C7P4 283 aa17.07■□□□□ 0.32
SEMA3F-208ENST00000470737 TBC1D9Q6ZT07 1266 aa17.07■□□□□ 0.32
SEMA3F-208ENST00000470737 USP17L5A8MUK1 530 aa17.06■□□□□ 0.32
SEMA3F-208ENST00000470737 ARID4AP29374 1257 aaPredicted RBP17.06■□□□□ 0.32
SEMA3F-208ENST00000470737 CAP2P40123 477 aa17.06■□□□□ 0.32
SEMA3F-208ENST00000470737 HMGCS2P54868 508 aa17.06■□□□□ 0.32
SEMA3F-208ENST00000470737 PI16Q6UXB8 463 aa17.06■□□□□ 0.32
SEMA3F-208ENST00000470737 HERC5Q9UII4 1024 aaKnown RBP17.06■□□□□ 0.32
SEMA3F-208ENST00000470737 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
SEMA3F-208ENST00000470737 BAG3O95817 575 aa17.05■□□□□ 0.32
SEMA3F-208ENST00000470737 ZNF384Q8TF68 577 aa17.05■□□□□ 0.32
SEMA3F-208ENST00000470737 TRIM34Q9BYJ4 488 aa17.05■□□□□ 0.32
SEMA3F-208ENST00000470737 PLCG2P16885 1265 aa17.04■□□□□ 0.32
SEMA3F-208ENST00000470737 MCAMP43121 646 aa17.04■□□□□ 0.32
SEMA3F-208ENST00000470737 TTC39AQ5SRH9 613 aa17.04■□□□□ 0.32
SEMA3F-208ENST00000470737 FRAT1Q92837 279 aaPredicted RBP17.04■□□□□ 0.32
SEMA3F-208ENST00000470737 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.04■□□□□ 0.32
SEMA3F-208ENST00000470737 DHX36Q9H2U1 1008 aaKnown RBP17.04■□□□□ 0.32
SEMA3F-208ENST00000470737 PAK6Q9NQU5 681 aaPredicted RBP17.04■□□□□ 0.32
SEMA3F-208ENST00000470737 TMOD4Q9NZQ9 345 aa17.04■□□□□ 0.32
SEMA3F-208ENST00000470737 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
SEMA3F-208ENST00000470737 MAST2Q6P0Q8 1798 aa17.03■□□□□ 0.32
SEMA3F-208ENST00000470737 HMGCRP04035 888 aa17.03■□□□□ 0.32
SEMA3F-208ENST00000470737 IRX3P78415 501 aaPredicted RBP17.03■□□□□ 0.32
SEMA3F-208ENST00000470737 OS9Q13438 667 aaPredicted RBP17.03■□□□□ 0.32
SEMA3F-208ENST00000470737 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
SEMA3F-208ENST00000470737 NAA16Q6N069 864 aaPredicted RBP17.03■□□□□ 0.32
SEMA3F-208ENST00000470737 NECAB2Q7Z6G3 386 aa17.03■□□□□ 0.32
SEMA3F-208ENST00000470737 ASCC2Q9H1I8 757 aaPredicted RBP17.03■□□□□ 0.32
SEMA3F-208ENST00000470737 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.03■□□□□ 0.32
SEMA3F-208ENST00000470737 ASNSP08243 561 aa17.02■□□□□ 0.32
SEMA3F-208ENST00000470737 TRIM27P14373 513 aa17.02■□□□□ 0.32
SEMA3F-208ENST00000470737 SH3D19Q5HYK7 790 aa17.02■□□□□ 0.32
SEMA3F-208ENST00000470737 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
SEMA3F-208ENST00000470737 CRACR2BQ8N4Y2 399 aaPredicted RBP17.02■□□□□ 0.32
SEMA3F-208ENST00000470737 SH3RF3Q8TEJ3 882 aaPredicted RBP17.02■□□□□ 0.32
SEMA3F-208ENST00000470737 PAWRQ96IZ0 340 aaKnown RBP17.02■□□□□ 0.32
SEMA3F-208ENST00000470737 CRISPLD2Q9H0B8 497 aa17.02■□□□□ 0.32
SEMA3F-208ENST00000470737 AATFQ9NY61 560 aaKnown RBP eCLIP17.02■□□□□ 0.32
SEMA3F-208ENST00000470737 PNMA6EA0A0J9YXQ4 647 aa17.01■□□□□ 0.31
SEMA3F-208ENST00000470737 A0A1W2PPC1 479 aa17.01■□□□□ 0.31
SEMA3F-208ENST00000470737 MIER1Q8N108 512 aa17.01■□□□□ 0.31
SEMA3F-208ENST00000470737 ANKLE1Q8NAG6 615 aa17.01■□□□□ 0.31
SEMA3F-208ENST00000470737 HMX1Q9NP08 348 aaPredicted RBP17.01■□□□□ 0.31
SEMA3F-208ENST00000470737 RPTORQ8N122 1335 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 BACE1P56817 501 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 MTMR2Q13614 643 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 RRP1BQ14684 758 aaKnown RBP17■□□□□ 0.31
SEMA3F-208ENST00000470737 MAPKAPK5Q8IW41 473 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 CCAR1Q8IX12 1150 aaKnown RBP17■□□□□ 0.31
SEMA3F-208ENST00000470737 TGFBRAP1Q8WUH2 860 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 CLUAP1Q96AJ1 413 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 CDK5RAP2Q96SN8 1893 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 WDR18Q9BV38 432 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 PRO3102Q9H379 93 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 GPR108Q9NPR9 543 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 SNRKQ9NRH2 765 aa17■□□□□ 0.31
SEMA3F-208ENST00000470737 SIPA1L1O43166 1804 aa16.99■□□□□ 0.31
SEMA3F-208ENST00000470737 FOCADQ5VW36 1801 aa16.99■□□□□ 0.31
SEMA3F-208ENST00000470737 C19orf81C9J6K1 198 aa16.99■□□□□ 0.31
SEMA3F-208ENST00000470737 HLA-DOAP06340 250 aa16.99■□□□□ 0.31
SEMA3F-208ENST00000470737 TNNI3KQ59H18 835 aa16.99■□□□□ 0.31
SEMA3F-208ENST00000470737 FOXP4Q8IVH2 680 aaPredicted RBP16.99■□□□□ 0.31
SEMA3F-208ENST00000470737 GINM1Q9NU53 330 aa16.99■□□□□ 0.31
SEMA3F-208ENST00000470737 MORF4L1Q9UBU8 362 aa16.99■□□□□ 0.31
SEMA3F-208ENST00000470737 FPGT-TNNI3KV9GXZ4 949 aa16.99■□□□□ 0.31
SEMA3F-208ENST00000470737 ALPK3Q96L96 1907 aa16.99■□□□□ 0.31
SEMA3F-208ENST00000470737 IGSF3O75054 1194 aa16.98■□□□□ 0.31
SEMA3F-208ENST00000470737 PPP4CP60510 307 aa16.98■□□□□ 0.31
SEMA3F-208ENST00000470737 PDE3AQ14432 1141 aa16.98■□□□□ 0.31
SEMA3F-208ENST00000470737 NUDT12Q9BQG2 462 aa16.98■□□□□ 0.31
SEMA3F-208ENST00000470737 GJD2Q9UKL4 321 aa16.98■□□□□ 0.31
SEMA3F-208ENST00000470737 SZT2Q5T011 3432 aa16.98■□□□□ 0.31
SEMA3F-208ENST00000470737 FLT1P17948 1338 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 MYO5AQ9Y4I1 1855 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms