RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 BIN2Q9UBW5 565 aaPredicted RBP4.67□□□□□ -1.66
UBXN4-206ENST00000470687 ZCCHC6Q5VYS8 1495 aaKnown RBP4.67□□□□□ -1.66
UBXN4-206ENST00000470687 UNC13AQ9UPW8 1703 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 EIF1AYO14602 144 aaKnown RBP4.66□□□□□ -1.66
UBXN4-206ENST00000470687 ZNF862O60290 1169 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 RNGTTO60942 597 aaKnown RBP4.66□□□□□ -1.66
UBXN4-206ENST00000470687 CTSHP09668 335 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 SLFN14P0C7P3 912 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 HCLS1P14317 486 aaPredicted RBP4.66□□□□□ -1.66
UBXN4-206ENST00000470687 AFMP43652 599 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 ENOX2Q16206 610 aaKnown RBP4.66□□□□□ -1.66
UBXN4-206ENST00000470687 CCDC27Q2M243 656 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 KIF4BQ2VIQ3 1234 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 MPZL3Q6UWV2 235 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 TOP6BLQ8N6T0 577 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 EPS8L3Q8TE67 593 aaKnown RBP4.66□□□□□ -1.66
UBXN4-206ENST00000470687 HEXIM2Q96MH2 286 aaKnown RBP4.66□□□□□ -1.66
UBXN4-206ENST00000470687 OSBPL7Q9BZF2 842 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 PCOLCE2Q9UKZ9 415 aa4.66□□□□□ -1.66
UBXN4-206ENST00000470687 BICRAQ9NZM4 1560 aa4.65□□□□□ -1.66
UBXN4-206ENST00000470687 NFIBO00712 420 aa4.65□□□□□ -1.67
UBXN4-206ENST00000470687 NEFMP07197 916 aa4.65□□□□□ -1.67
UBXN4-206ENST00000470687 INHBBP09529 407 aa4.65□□□□□ -1.67
UBXN4-206ENST00000470687 TMCO4Q5TGY1 634 aa4.65□□□□□ -1.67
UBXN4-206ENST00000470687 KIAA0319Q5VV43 1072 aa4.65□□□□□ -1.67
UBXN4-206ENST00000470687 FAM214BQ7L5A3 538 aa4.65□□□□□ -1.67
UBXN4-206ENST00000470687 SPACA3Q8IXA5 215 aa4.65□□□□□ -1.67
UBXN4-206ENST00000470687 KIRREL1Q96J84 757 aa4.65□□□□□ -1.67
UBXN4-206ENST00000470687 FAM161BQ96MY7 647 aa4.65□□□□□ -1.67
UBXN4-206ENST00000470687 ZC3H12CQ9C0D7 883 aaKnown RBP4.65□□□□□ -1.67
UBXN4-206ENST00000470687 ZNF16P17020 682 aaPredicted RBP4.64□□□□□ -1.67
UBXN4-206ENST00000470687 PTPN12Q05209 780 aaKnown RBP4.64□□□□□ -1.67
UBXN4-206ENST00000470687 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
UBXN4-206ENST00000470687 FBXO15Q8NCQ5 510 aaPredicted RBP4.64□□□□□ -1.67
UBXN4-206ENST00000470687 ISL2Q96A47 359 aa4.64□□□□□ -1.67
UBXN4-206ENST00000470687 CITED4Q96RK1 184 aa4.64□□□□□ -1.67
UBXN4-206ENST00000470687 CSRNP1Q96S65 589 aa4.64□□□□□ -1.67
UBXN4-206ENST00000470687 KRT82Q9NSB4 513 aa4.64□□□□□ -1.67
UBXN4-206ENST00000470687 BRPF3Q9ULD4 1205 aa4.64□□□□□ -1.67
UBXN4-206ENST00000470687 JAG2Q9Y219 1238 aa4.64□□□□□ -1.67
UBXN4-206ENST00000470687 NPIPB6E9PJ23 425 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 RBAK-RBAKDNI3L0D1 243 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 IGF2BP3O00425 579 aaKnown RBP eCLIP4.63□□□□□ -1.67
UBXN4-206ENST00000470687 CTSWP56202 376 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 NKPD1Q17RQ9 610 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 TMEM67Q5HYA8 995 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 CYFIP1Q7L576 1253 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 EHD4Q9H223 541 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 ABCB6Q9NP58 842 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 NPHS2Q9NP85 383 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 CD320Q9NPF0 282 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 IGSF5Q9NSI5 407 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 C19orf73Q9NVV2 129 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 PITPNM2Q9BZ72 1349 aa4.63□□□□□ -1.67
UBXN4-206ENST00000470687 PNMA6FA0A0J9YX94 578 aa4.62□□□□□ -1.67
UBXN4-206ENST00000470687 RBM47A0AV96 593 aaKnown RBP4.62□□□□□ -1.67
UBXN4-206ENST00000470687 ZBTB7CA1YPR0 619 aa4.62□□□□□ -1.67
UBXN4-206ENST00000470687 GSTP1P09211 210 aaKnown RBP4.62□□□□□ -1.67
UBXN4-206ENST00000470687 HNRNPUQ00839 825 aaKnown RBP eCLIP4.62□□□□□ -1.67
UBXN4-206ENST00000470687 FAAP100Q0VG06 881 aa4.62□□□□□ -1.67
UBXN4-206ENST00000470687 MRPL58Q14197 206 aaKnown RBP4.62□□□□□ -1.67
UBXN4-206ENST00000470687 RPS26P11Q5JNZ5 115 aaPredicted RBP4.62□□□□□ -1.67
UBXN4-206ENST00000470687 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.62□□□□□ -1.67
UBXN4-206ENST00000470687 C3orf58Q8NDZ4 430 aa4.62□□□□□ -1.67
UBXN4-206ENST00000470687 CCDC74AQ96AQ1 378 aa4.62□□□□□ -1.67
UBXN4-206ENST00000470687 DIRC2Q96SL1 478 aa4.62□□□□□ -1.67
UBXN4-206ENST00000470687 NSUN3Q9H649 340 aaKnown RBP4.62□□□□□ -1.67
UBXN4-206ENST00000470687 GTF2IRD1Q9UHL9 959 aa4.62□□□□□ -1.67
UBXN4-206ENST00000470687 NDUFB5O43674 189 aa4.61□□□□□ -1.67
UBXN4-206ENST00000470687 ZNF157P51786 506 aaPredicted RBP4.61□□□□□ -1.67
UBXN4-206ENST00000470687 CLCN7P51798 805 aa4.61□□□□□ -1.67
UBXN4-206ENST00000470687 GRM2Q14416 872 aa4.61□□□□□ -1.67
UBXN4-206ENST00000470687 KCNA10Q16322 511 aa4.61□□□□□ -1.67
UBXN4-206ENST00000470687 PRPF40BQ6NWY9 871 aaKnown RBP4.61□□□□□ -1.67
UBXN4-206ENST00000470687 DMRTB1Q96MA1 342 aa4.61□□□□□ -1.67
UBXN4-206ENST00000470687 SSU72Q9NP77 194 aaKnown RBP4.61□□□□□ -1.67
UBXN4-206ENST00000470687 CECR2Q9BXF3 1484 aa4.61□□□□□ -1.67
UBXN4-206ENST00000470687 PATL2C9JE40 543 aaKnown RBP4.6□□□□□ -1.67
UBXN4-206ENST00000470687 TMEM253P0C7T8 217 aa4.6□□□□□ -1.67
UBXN4-206ENST00000470687 MED14OSP0DP75 135 aa4.6□□□□□ -1.67
UBXN4-206ENST00000470687 HOXA5P20719 270 aa4.6□□□□□ -1.67
UBXN4-206ENST00000470687 PLCB3Q01970 1234 aa4.6□□□□□ -1.67
UBXN4-206ENST00000470687 RASIP1Q5U651 963 aa4.6□□□□□ -1.67
UBXN4-206ENST00000470687 CIAPIN1Q6FI81 312 aa4.6□□□□□ -1.67
UBXN4-206ENST00000470687 PDZD3Q86UT5 571 aa4.6□□□□□ -1.67
UBXN4-206ENST00000470687 RNF214Q8ND24 703 aa4.6□□□□□ -1.67
UBXN4-206ENST00000470687 C20orf173Q96LM9 149 aa4.6□□□□□ -1.67
UBXN4-206ENST00000470687 DUSP9Q99956 384 aaKnown RBP4.6□□□□□ -1.67
UBXN4-206ENST00000470687 CARS2Q9HA77 564 aaKnown RBP4.6□□□□□ -1.67
UBXN4-206ENST00000470687 RECKO95980 971 aa4.59□□□□□ -1.67
UBXN4-206ENST00000470687 GDNFP39905 211 aa4.59□□□□□ -1.67
UBXN4-206ENST00000470687 MAPK8P45983 427 aa4.59□□□□□ -1.67
UBXN4-206ENST00000470687 ERVK-24P63145 666 aa4.59□□□□□ -1.67
UBXN4-206ENST00000470687 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.59□□□□□ -1.67
UBXN4-206ENST00000470687 ZC3H12AQ5D1E8 599 aaKnown RBP4.59□□□□□ -1.67
UBXN4-206ENST00000470687 ATG14Q6ZNE5 492 aa4.59□□□□□ -1.67
UBXN4-206ENST00000470687 KCNK12Q9HB15 430 aa4.59□□□□□ -1.67
UBXN4-206ENST00000470687 PRDM10Q9NQV6 1147 aa4.59□□□□□ -1.67
UBXN4-206ENST00000470687 CC2D2AQ9P2K1 1620 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 EIF4G1Q04637 1599 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms