RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 DACT1Q9NYF0 836 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 KIAA1551Q9HCM1 1747 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 USP17L12C9JPN9 530 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 USP17L21D6R901 530 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 FMNL1O95466 1100 aaPredicted RBP19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 LDHCP07864 332 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 SLC3A2P08195 630 aaKnown RBP19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 CEBPZQ03701 1054 aaKnown RBP19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 SEC23AQ15436 765 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 RTN1Q16799 776 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 RNF214Q8ND24 703 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 PDLIM2Q96JY6 352 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 GPR101Q96P66 508 aaPredicted RBP19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 EYA3Q99504 573 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 CLSTN2Q9H4D0 955 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 CD209Q9NNX6 404 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 DCP1AQ9NPI6 582 aaPredicted RBP19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 AATFQ9NY61 560 aaKnown RBP eCLIP19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 POLLQ9UGP5 575 aa19.69■□□□□ 0.74
SMARCD3-206ENST00000470588 IL1R1P14778 569 aa19.68■□□□□ 0.74
SMARCD3-206ENST00000470588 KIF23Q02241 960 aaPredicted RBP19.68■□□□□ 0.74
SMARCD3-206ENST00000470588 SLC51AQ86UW1 340 aa19.68■□□□□ 0.74
SMARCD3-206ENST00000470588 STK11IPQ8N1F8 1099 aa19.68■□□□□ 0.74
SMARCD3-206ENST00000470588 ZKSCAN3Q9BRR0 538 aa19.68■□□□□ 0.74
SMARCD3-206ENST00000470588 ORC4O43929 436 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 CCDC192P0DO97 292 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 NT5C2P49902 561 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 TRIM29Q14134 588 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 CCDC144CPQ8IYA2 1237 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 ZSCAN10Q96SZ4 725 aaPredicted RBP19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 MYL10Q9BUA6 226 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 ZC3H12CQ9C0D7 883 aaKnown RBP19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 TNMDQ9H2S6 317 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 C10orf71Q711Q0 1435 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 YEATS4O95619 227 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 PPP4CP60510 307 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 MYSM1Q5VVJ2 828 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 KRT40Q6A162 431 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 RBM43Q6ZSC3 357 aaKnown RBP19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 ZNF654Q8IZM8 581 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 FANCBQ8NB91 859 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 PHKBQ93100 1093 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 POLR3EQ9NVU0 708 aa19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 ARPP21Q9UBL0 812 aaPredicted RBP19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMARCD3-206ENST00000470588 DLEC1Q9Y238 1755 aa19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 G3V3G9 751 aa19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 RANBP6O60518 1105 aaKnown RBP19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 POLR3DP05423 398 aaPredicted RBP19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 DCAF8Q5TAQ9 597 aa19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 IQCA1Q86XH1 822 aa19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 CCAR1Q8IX12 1150 aaKnown RBP19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 TRIM22Q8IYM9 498 aa19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 TBC1D22AQ8WUA7 517 aa19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 SLC26A6Q9BXS9 759 aa19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 COA1Q9GZY4 146 aa19.66■□□□□ 0.74
SMARCD3-206ENST00000470588 CYP2D7A0A087X1C5 515 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 NR1I2O75469 434 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 BAG3O95817 575 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 HS1BP3Q53T59 392 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 CERS3Q8IU89 383 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 CRACR2BQ8N4Y2 399 aaPredicted RBP19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 LINC00301Q8NCQ3 95 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 KCNG4Q8TDN1 519 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 NOL10Q9BSC4 688 aaKnown RBP19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 FTOQ9C0B1 505 aaKnown RBP eCLIP19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 TNKSO95271 1327 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 CTAGE5O15320 804 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 CHRNA5P30532 468 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 CC2D2BQ6DHV5 1058 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 ADALQ6DHV7 355 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 PDGFDQ9GZP0 370 aaPredicted RBP19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 GJB4Q9NTQ9 266 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 JAG2Q9Y219 1238 aa19.65■□□□□ 0.74
SMARCD3-206ENST00000470588 A0A1W2PQ27 194 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 A0A1W2PQ64 194 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 A0A1W2PQD8 194 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 KIF28PB7ZC32 967 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 RIMBP2O15034 1052 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 CALM1P0DP23 149 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 CALM2P0DP24 149 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 CALM3P0DP25 149 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 ME1P48163 572 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 STK38Q15208 465 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 CAMK4Q16566 473 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 CCDC73Q6ZRK6 1079 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 AIFM3Q96NN9 605 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 SLX4Q8IY92 1834 aa19.64■□□□□ 0.73
SMARCD3-206ENST00000470588 SMIM22K7EJ46 135 aa19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 U2AF2P26368 475 aaKnown RBP eCLIP19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 POLD1P28340 1107 aa19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 PDE4BQ07343 736 aa19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 CATIPQ7Z7H3 387 aa19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 NBPF11Q86T75 865 aa19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 SLF2Q8IX21 1173 aa19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 ENAHQ8N8S7 591 aaPredicted RBP19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 PCDHA7Q9UN72 937 aa19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 CLIC4Q9Y696 253 aa19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 BAZ2AQ9UIF9 1905 aaKnown RBP19.63■□□□□ 0.73
SMARCD3-206ENST00000470588 DEXIO95424 95 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms