RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 PLEKHG2Q9H7P9 1386 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 GOLGA8CPA6NN73 597 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 URI1O94763 535 aaPredicted RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 STK10O94804 968 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 CDC25BP30305 580 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 C10orf76Q5T2E6 689 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 DPP8Q6V1X1 898 aaPredicted RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 RRP36Q96EU6 259 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 TACO1Q9BSH4 297 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 ABCC12Q96J65 1359 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 CALUO43852 315 aaPredicted RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 AKR1B10O60218 316 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 TRIM27P14373 513 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 KRT2P35908 639 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 PDE1AP54750 535 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 FKBP4Q02790 459 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 FAM160A1Q05DH4 1040 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 SPECC1Q5M775 1068 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 PRPF40BQ6NWY9 871 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 USHBP1Q8N6Y0 703 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 RBM17Q96I25 401 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 SEPT11Q9NVA2 429 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 THRAP3Q9Y2W1 955 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 BZW2Q9Y6E2 419 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 SYNMO15061 1565 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 N4BP3O15049 544 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 CTNNA2P26232 953 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 NOP2P46087 812 aaKnown RBP6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 SPAG5Q96R06 1193 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 DSCC1Q9BVC3 393 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 TBC1D2Q9BYX2 928 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 FAN1Q9Y2M0 1017 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 YTHDC2Q9H6S0 1430 aaKnown RBP6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 ZBBXA8MT70 800 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 DLL1O00548 723 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 C21orf2O43822 256 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 UBASH3AP57075 661 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 SLC8A3P57103 927 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 MYL5Q02045 173 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 BRDTQ58F21 947 aaPredicted RBP6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 LIN9Q5TKA1 542 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 TBC1D9Q6ZT07 1266 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 PAF1Q8N7H5 531 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 NECTIN2Q92692 538 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 TRIM11Q96F44 468 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 HAUS8Q9BT25 410 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 DDX21Q9NR30 783 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 ARHGAP6O43182 974 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 IDH1O75874 414 aaKnown RBP6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 GJB2P29033 226 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 SLC9C1Q4G0N8 1177 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 TRIM42Q8IWZ5 723 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 HACE1Q8IYU2 909 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 CCHCR1Q8TD31 782 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 LEO1Q8WVC0 666 aaPredicted RBP6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 PSMD1Q99460 953 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 THEGQ9P2T0 379 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 SPTLC2O15270 562 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 BCAR3O75815 825 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 LACTBP83111 547 aaPredicted RBP6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 SREBF2Q12772 1141 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 ALCAMQ13740 583 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 WHAMMP3Q1A5X7 153 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 PHLDB2Q86SQ0 1253 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 NEK11Q8NG66 645 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 WDR66Q8TBY9 1149 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 C16orf45Q96MC5 204 aaPredicted RBP6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 FAM96AQ9H5X1 160 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 NMRK2Q9NPI5 230 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 KDM5CP41229 1560 aa6.87□□□□□ -1.31
CCDC144A-212ENST00000470068 PRPF6O94906 941 aaKnown RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 CYP26C1Q6V0L0 522 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 KRT26Q7Z3Y9 468 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 CACNA2D3Q8IZS8 1091 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 UBL4BQ8N7F7 174 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 GRK7Q8WTQ7 553 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 CEP63Q96MT8 703 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 EDEM3Q9BZQ6 932 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 MROH5Q6ZUA9 1318 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 PFDN6O15212 129 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 STAT6P42226 847 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 FSTL1Q12841 308 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 CALCOCO2Q13137 446 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 PPP2R5AQ15172 486 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 IFT20Q8IY31 132 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 TRIM47Q96LD4 638 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 KIF2CQ99661 725 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 JPH2Q9BR39 696 aaPredicted RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 METTL14Q9HCE5 456 aaKnown RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 LARSQ9P2J5 1176 aaKnown RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 TRMT112Q9UI30 125 aaKnown RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 DIS3Q9Y2L1 958 aaKnown RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 TMEM2Q9UHN6 1383 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 A2ML1A8K2U0 1454 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 ATP7AQ04656 1500 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 PLEKHG3A1L390 1219 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 ATP2B3Q16720 1220 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 SRRM1Q8IYB3 904 aaKnown RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 IP6K1Q92551 441 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 SAMD15Q9P1V8 674 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms