RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 OSBPL5Q9H0X9 879 aaPredicted RBP15.13■□□□□ 0.01
HDAC3-204ENST00000469207 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
HDAC3-204ENST00000469207 AGTPBP1Q9UPW5 1226 aa15.13■□□□□ 0.01
HDAC3-204ENST00000469207 SGPL1O95470 568 aa15.12■□□□□ 0.01
HDAC3-204ENST00000469207 INHAP05111 366 aa15.12■□□□□ 0.01
HDAC3-204ENST00000469207 LDHCP07864 332 aa15.12■□□□□ 0.01
HDAC3-204ENST00000469207 HMGCS2P54868 508 aa15.12■□□□□ 0.01
HDAC3-204ENST00000469207 SHROOM1Q2M3G4 852 aaPredicted RBP15.12■□□□□ 0.01
HDAC3-204ENST00000469207 SLAIN1Q8ND83 568 aa15.12■□□□□ 0.01
HDAC3-204ENST00000469207 AATFQ9NY61 560 aaKnown RBP eCLIP15.12■□□□□ 0.01
HDAC3-204ENST00000469207 RBM27Q9P2N5 1060 aaKnown RBP15.12■□□□□ 0.01
HDAC3-204ENST00000469207 SLC45A1Q9Y2W3 748 aa15.12■□□□□ 0.01
HDAC3-204ENST00000469207 DOCK3Q8IZD9 2030 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 IPO8O15397 1037 aaKnown RBP15.11■□□□□ 0.01
HDAC3-204ENST00000469207 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
HDAC3-204ENST00000469207 CAP2P40123 477 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 GSTO1P78417 241 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 ADGRA1Q86SQ6 560 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 TEX11Q8IYF3 940 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 ZNF280CQ8ND82 737 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 NKX2-3Q8TAU0 364 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 DBNDD2Q9BQY9 259 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 C1orf115Q9H7X2 142 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 DOCK1Q14185 1865 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 PTPRFP10586 1907 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 SZT2Q5T011 3432 aa15.11■□□□□ 0.01
HDAC3-204ENST00000469207 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
HDAC3-204ENST00000469207 TFRCP02786 760 aaKnown RBP15.1■□□□□ 0.01
HDAC3-204ENST00000469207 TGFBRAP1Q8WUH2 860 aa15.1■□□□□ 0.01
HDAC3-204ENST00000469207 DEFB118Q96PH6 123 aa15.1■□□□□ 0.01
HDAC3-204ENST00000469207 CEP290O15078 2479 aa15.09■□□□□ 0.01
HDAC3-204ENST00000469207 FARP2O94887 1054 aaPredicted RBP15.09■□□□□ 0.01
HDAC3-204ENST00000469207 CYP2E1P05181 493 aaPredicted RBP15.09■□□□□ 0.01
HDAC3-204ENST00000469207 TRIM32Q13049 653 aa15.09■□□□□ 0.01
HDAC3-204ENST00000469207 TTC39AQ5SRH9 613 aa15.09■□□□□ 0.01
HDAC3-204ENST00000469207 NAA16Q6N069 864 aaPredicted RBP15.09■□□□□ 0.01
HDAC3-204ENST00000469207 MAPKAPK5Q8IW41 473 aa15.09■□□□□ 0.01
HDAC3-204ENST00000469207 PXYLP1Q8TE99 480 aa15.09■□□□□ 0.01
HDAC3-204ENST00000469207 ASCC2Q9H1I8 757 aaPredicted RBP15.09■□□□□ 0.01
HDAC3-204ENST00000469207 USP17L5A8MUK1 530 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 SURF6O75683 361 aaKnown RBP15.08■□□□□ 0
HDAC3-204ENST00000469207 UQCRFS1P1P0C7P4 283 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 ZAP70P43403 619 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 DYNLL1P63167 89 aaKnown RBP15.08■□□□□ 0
HDAC3-204ENST00000469207 ATP8B2P98198 1209 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 IRF5Q13568 498 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 POLA2Q14181 598 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 TNNI3KQ59H18 835 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 PROCA1Q8NCQ7 364 aaPredicted RBP15.08■□□□□ 0
HDAC3-204ENST00000469207 COA7Q96BR5 231 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 CCDC8Q9H0W5 538 aaPredicted RBP15.08■□□□□ 0
HDAC3-204ENST00000469207 DNAJC18Q9H819 358 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 GJD2Q9UKL4 321 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 PALD1Q9ULE6 856 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 FPGT-TNNI3KV9GXZ4 949 aa15.08■□□□□ 0
HDAC3-204ENST00000469207 GDF11O95390 407 aa15.07■□□□□ 0
HDAC3-204ENST00000469207 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
HDAC3-204ENST00000469207 FAM110CQ1W6H9 321 aa15.07■□□□□ 0
HDAC3-204ENST00000469207 PAWRQ96IZ0 340 aaKnown RBP15.07■□□□□ 0
HDAC3-204ENST00000469207 P2RX7Q99572 595 aaKnown RBP15.07■□□□□ 0
HDAC3-204ENST00000469207 HTATIP2Q9BUP3 242 aa15.07■□□□□ 0
HDAC3-204ENST00000469207 PIH1D3Q9NQM4 214 aaKnown RBP15.07■□□□□ 0
HDAC3-204ENST00000469207 TLR7Q9NYK1 1049 aaKnown RBP15.07■□□□□ 0
HDAC3-204ENST00000469207 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
HDAC3-204ENST00000469207 SAP30BPQ9UHR5 308 aaKnown RBP15.07■□□□□ 0
HDAC3-204ENST00000469207 TRIOBPQ9H2D6 2365 aa15.06■□□□□ 0
HDAC3-204ENST00000469207 MAP4K4O95819 1239 aaPredicted RBP15.06■□□□□ 0
HDAC3-204ENST00000469207 PPP4CP60510 307 aa15.06■□□□□ 0
HDAC3-204ENST00000469207 MTMR2Q13614 643 aa15.06■□□□□ 0
HDAC3-204ENST00000469207 SH3D19Q5HYK7 790 aa15.06■□□□□ 0
HDAC3-204ENST00000469207 CCDC158Q5M9N0 1113 aa15.06■□□□□ 0
HDAC3-204ENST00000469207 ZKSCAN2Q63HK3 967 aa15.06■□□□□ 0
HDAC3-204ENST00000469207 SSH3Q8TE77 659 aa15.06■□□□□ 0
HDAC3-204ENST00000469207 DIS3LQ8TF46 1054 aaKnown RBP15.06■□□□□ 0
HDAC3-204ENST00000469207 NOL10Q9BSC4 688 aaKnown RBP15.06■□□□□ 0
HDAC3-204ENST00000469207 PAK6Q9NQU5 681 aaPredicted RBP15.06■□□□□ 0
HDAC3-204ENST00000469207 HERC5Q9UII4 1024 aaKnown RBP15.06■□□□□ 0
HDAC3-204ENST00000469207 PNMA3Q9UL41 463 aa15.06■□□□□ 0
HDAC3-204ENST00000469207 MYO5AQ9Y4I1 1855 aaKnown RBP15.06■□□□□ 0
HDAC3-204ENST00000469207 RANBP2P49792 3224 aaKnown RBP15.05■□□□□ -0
HDAC3-204ENST00000469207 ZBTB7BO15156 539 aaPredicted RBP15.05■□□□□ -0
HDAC3-204ENST00000469207 BAG3O95817 575 aa15.05■□□□□ -0
HDAC3-204ENST00000469207 RLBP1P12271 317 aa15.05■□□□□ -0
HDAC3-204ENST00000469207 Q3C1V9 767 aa15.05■□□□□ -0
HDAC3-204ENST00000469207 EAF2Q96CJ1 260 aaPredicted RBP15.05■□□□□ -0
HDAC3-204ENST00000469207 PRO3102Q9H379 93 aa15.05■□□□□ -0
HDAC3-204ENST00000469207 TXNRD2Q9NNW7 524 aa15.05■□□□□ -0
HDAC3-204ENST00000469207 GPR108Q9NPR9 543 aa15.05■□□□□ -0
HDAC3-204ENST00000469207 FLT1P17948 1338 aa15.05■□□□□ -0
HDAC3-204ENST00000469207 SIPA1L1O43166 1804 aa15.04■□□□□ -0
HDAC3-204ENST00000469207 ATAD5Q96QE3 1844 aa15.04■□□□□ -0
HDAC3-204ENST00000469207 CYP2B6P20813 491 aa15.04■□□□□ -0
HDAC3-204ENST00000469207 GCLCP48506 637 aaPredicted RBP15.04■□□□□ -0
HDAC3-204ENST00000469207 BACE1P56817 501 aa15.04■□□□□ -0
HDAC3-204ENST00000469207 POTEEQ6S8J3 1075 aa15.04■□□□□ -0
HDAC3-204ENST00000469207 FOXP4Q8IVH2 680 aaPredicted RBP15.04■□□□□ -0
HDAC3-204ENST00000469207 MIGA1Q8NAN2 632 aa15.04■□□□□ -0
HDAC3-204ENST00000469207 WDR18Q9BV38 432 aa15.04■□□□□ -0
HDAC3-204ENST00000469207 CRISPLD2Q9H0B8 497 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms