RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 TFRCP02786 760 aaKnown RBP16.18■□□□□ 0.18
PTPN7-207ENST00000468385 CAPN2P17655 700 aa16.18■□□□□ 0.18
PTPN7-207ENST00000468385 SPP2Q13103 211 aa16.18■□□□□ 0.18
PTPN7-207ENST00000468385 MTX1Q13505 466 aa16.18■□□□□ 0.18
PTPN7-207ENST00000468385 PI16Q6UXB8 463 aa16.18■□□□□ 0.18
PTPN7-207ENST00000468385 PROCA1Q8NCQ7 364 aaPredicted RBP16.18■□□□□ 0.18
PTPN7-207ENST00000468385 COA7Q96BR5 231 aa16.18■□□□□ 0.18
PTPN7-207ENST00000468385 CRISPLD2Q9H0B8 497 aa16.18■□□□□ 0.18
PTPN7-207ENST00000468385 PNMA3Q9UL41 463 aa16.18■□□□□ 0.18
PTPN7-207ENST00000468385 TAOK2Q9UL54 1235 aa16.18■□□□□ 0.18
PTPN7-207ENST00000468385 COL2A1P02458 1487 aaPredicted RBP16.17■□□□□ 0.18
PTPN7-207ENST00000468385 MAP4K4O95819 1239 aaPredicted RBP16.17■□□□□ 0.18
PTPN7-207ENST00000468385 RRP1BQ14684 758 aaKnown RBP16.17■□□□□ 0.18
PTPN7-207ENST00000468385 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
PTPN7-207ENST00000468385 ZNF280CQ8ND82 737 aa16.17■□□□□ 0.18
PTPN7-207ENST00000468385 LOC285556D6RIA3 1793 aa16.17■□□□□ 0.18
PTPN7-207ENST00000468385 DOCK3Q8IZD9 2030 aa16.16■□□□□ 0.18
PTPN7-207ENST00000468385 EVI5O60447 810 aa16.16■□□□□ 0.18
PTPN7-207ENST00000468385 SPATA5Q8NB90 893 aa16.16■□□□□ 0.18
PTPN7-207ENST00000468385 PAWRQ96IZ0 340 aaKnown RBP16.16■□□□□ 0.18
PTPN7-207ENST00000468385 NEUROD6Q96NK8 337 aa16.16■□□□□ 0.18
PTPN7-207ENST00000468385 TBC1D2Q9BYX2 928 aa16.16■□□□□ 0.18
PTPN7-207ENST00000468385 A0A1W2PPC1 479 aa16.15■□□□□ 0.18
PTPN7-207ENST00000468385 LDHCP07864 332 aa16.15■□□□□ 0.18
PTPN7-207ENST00000468385 GNAI3P08754 354 aa16.15■□□□□ 0.18
PTPN7-207ENST00000468385 ARID4AP29374 1257 aaPredicted RBP16.15■□□□□ 0.18
PTPN7-207ENST00000468385 CAP2P40123 477 aa16.15■□□□□ 0.18
PTPN7-207ENST00000468385 GCLCP48506 637 aaPredicted RBP16.15■□□□□ 0.18
PTPN7-207ENST00000468385 RARSP54136 660 aaKnown RBP16.15■□□□□ 0.18
PTPN7-207ENST00000468385 HMGCS2P54868 508 aa16.15■□□□□ 0.18
PTPN7-207ENST00000468385 GSTO1P78417 241 aa16.15■□□□□ 0.18
PTPN7-207ENST00000468385 SH3D19Q5HYK7 790 aa16.15■□□□□ 0.18
PTPN7-207ENST00000468385 DIS3LQ8TF46 1054 aaKnown RBP16.15■□□□□ 0.18
PTPN7-207ENST00000468385 ARHGAP45Q92619 1136 aa16.15■□□□□ 0.18
PTPN7-207ENST00000468385 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTPN7-207ENST00000468385 GJD2Q9UKL4 321 aa16.15■□□□□ 0.18
PTPN7-207ENST00000468385 LAMA3Q16787 3333 aa16.15■□□□□ 0.18
PTPN7-207ENST00000468385 MCAMP43121 646 aa16.14■□□□□ 0.17
PTPN7-207ENST00000468385 PABPC4Q13310 644 aaKnown RBP eCLIP16.14■□□□□ 0.17
PTPN7-207ENST00000468385 ASCC2Q9H1I8 757 aaPredicted RBP16.14■□□□□ 0.17
PTPN7-207ENST00000468385 RAI14Q9P0K7 980 aa16.14■□□□□ 0.17
PTPN7-207ENST00000468385 ATAD5Q96QE3 1844 aa16.14■□□□□ 0.17
PTPN7-207ENST00000468385 ALPK3Q96L96 1907 aa16.13■□□□□ 0.17
PTPN7-207ENST00000468385 USP17L5A8MUK1 530 aa16.13■□□□□ 0.17
PTPN7-207ENST00000468385 SOX1O00570 391 aaPredicted RBP16.13■□□□□ 0.17
PTPN7-207ENST00000468385 HMGCRP04035 888 aa16.13■□□□□ 0.17
PTPN7-207ENST00000468385 TRIM32Q13049 653 aa16.13■□□□□ 0.17
PTPN7-207ENST00000468385 NECAB2Q7Z6G3 386 aa16.13■□□□□ 0.17
PTPN7-207ENST00000468385 TEX11Q8IYF3 940 aa16.13■□□□□ 0.17
PTPN7-207ENST00000468385 STAP2Q9UGK3 403 aa16.13■□□□□ 0.17
PTPN7-207ENST00000468385 HERC5Q9UII4 1024 aaKnown RBP16.13■□□□□ 0.17
PTPN7-207ENST00000468385 GORABQ5T7V8 394 aa16.12■□□□□ 0.17
PTPN7-207ENST00000468385 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
PTPN7-207ENST00000468385 SH3RF3Q8TEJ3 882 aaPredicted RBP16.12■□□□□ 0.17
PTPN7-207ENST00000468385 AS3MTQ9HBK9 375 aa16.12■□□□□ 0.17
PTPN7-207ENST00000468385 MORF4L1Q9UBU8 362 aa16.12■□□□□ 0.17
PTPN7-207ENST00000468385 SIPA1L1O43166 1804 aa16.12■□□□□ 0.17
PTPN7-207ENST00000468385 PNMA6EA0A0J9YXQ4 647 aa16.11■□□□□ 0.17
PTPN7-207ENST00000468385 MNX1P50219 401 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-207ENST00000468385 JAG1P78504 1218 aa16.11■□□□□ 0.17
PTPN7-207ENST00000468385 WDR18Q9BV38 432 aa16.11■□□□□ 0.17
PTPN7-207ENST00000468385 LRP2BPQ9P2M1 347 aa16.11■□□□□ 0.17
PTPN7-207ENST00000468385 PI4KBQ9UBF8 816 aa16.11■□□□□ 0.17
PTPN7-207ENST00000468385 RPTORQ8N122 1335 aa16.11■□□□□ 0.17
PTPN7-207ENST00000468385 PLXNB2O15031 1838 aa16.1■□□□□ 0.17
PTPN7-207ENST00000468385 GNAI2P04899 355 aa16.1■□□□□ 0.17
PTPN7-207ENST00000468385 UQCRFS1P1P0C7P4 283 aa16.1■□□□□ 0.17
PTPN7-207ENST00000468385 BACE1P56817 501 aa16.1■□□□□ 0.17
PTPN7-207ENST00000468385 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTPN7-207ENST00000468385 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
PTPN7-207ENST00000468385 MTMR2Q13614 643 aa16.1■□□□□ 0.17
PTPN7-207ENST00000468385 TRIB2Q92519 343 aa16.1■□□□□ 0.17
PTPN7-207ENST00000468385 LRCH3Q96II8 777 aa16.1■□□□□ 0.17
PTPN7-207ENST00000468385 GDF15Q99988 308 aa16.1■□□□□ 0.17
PTPN7-207ENST00000468385 DHX36Q9H2U1 1008 aaKnown RBP16.1■□□□□ 0.17
PTPN7-207ENST00000468385 DNAJC18Q9H819 358 aa16.1■□□□□ 0.17
PTPN7-207ENST00000468385 HMX1Q9NP08 348 aaPredicted RBP16.1■□□□□ 0.17
PTPN7-207ENST00000468385 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
PTPN7-207ENST00000468385 AATFQ9NY61 560 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTPN7-207ENST00000468385 TNNQ9UQP3 1299 aa16.1■□□□□ 0.17
PTPN7-207ENST00000468385 PEX10O60683 326 aa16.09■□□□□ 0.17
PTPN7-207ENST00000468385 TRIM27P14373 513 aa16.09■□□□□ 0.17
PTPN7-207ENST00000468385 HOXA7P31268 230 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-207ENST00000468385 METTL16Q86W50 562 aaKnown RBP16.09■□□□□ 0.17
PTPN7-207ENST00000468385 C7orf61Q8IZ16 206 aa16.09■□□□□ 0.17
PTPN7-207ENST00000468385 P2RX7Q99572 595 aaKnown RBP16.09■□□□□ 0.17
PTPN7-207ENST00000468385 BAG3O95817 575 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 ASNSP08243 561 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 CYP2B6P20813 491 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 BMP8BP34820 402 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 PPP4CP60510 307 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 IRX3P78415 501 aaPredicted RBP16.08■□□□□ 0.16
PTPN7-207ENST00000468385 SHROOM1Q2M3G4 852 aaPredicted RBP16.08■□□□□ 0.16
PTPN7-207ENST00000468385 MAP3K21Q5TCX8 1036 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 NAA16Q6N069 864 aaPredicted RBP16.08■□□□□ 0.16
PTPN7-207ENST00000468385 ADGRA1Q86SQ6 560 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 MAPKAPK5Q8IW41 473 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 TGFBRAP1Q8WUH2 860 aa16.08■□□□□ 0.16
PTPN7-207ENST00000468385 NOL10Q9BSC4 688 aaKnown RBP16.08■□□□□ 0.16
PTPN7-207ENST00000468385 NBPF3Q9H094 633 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms