RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 BRI3BPQ8WY22 251 aa22.57■■□□□ 1.2
YBX1-204ENST00000467957 DOCK1Q14185 1865 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 CCL15-CCL14A0A0B4J2E2 113 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 ERC2O15083 957 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 TBC1D8O95759 1140 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 CETPP11597 493 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 SNAPC2Q13487 334 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 CCL15Q16663 113 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 TSHZ3Q63HK5 1081 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 PI4K2BQ8TCG2 481 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 OTUD7AQ8TE49 926 aaPredicted RBP22.56■■□□□ 1.2
YBX1-204ENST00000467957 PALD1Q9ULE6 856 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 KCNH4Q9UQ05 1017 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 CASP8AP2Q9UKL3 1982 aa22.56■■□□□ 1.2
YBX1-204ENST00000467957 MYH1P12882 1939 aa22.55■■□□□ 1.2
YBX1-204ENST00000467957 FAM196BA6NMK8 535 aa22.55■■□□□ 1.2
YBX1-204ENST00000467957 GLRX3O76003 335 aaKnown RBP22.55■■□□□ 1.2
YBX1-204ENST00000467957 MX1P20591 662 aa22.55■■□□□ 1.2
YBX1-204ENST00000467957 KBTBD3Q8NAB2 608 aa22.55■■□□□ 1.2
YBX1-204ENST00000467957 CRNKL1Q9BZJ0 848 aaKnown RBP22.55■■□□□ 1.2
YBX1-204ENST00000467957 PICK1Q9NRD5 415 aa22.55■■□□□ 1.2
YBX1-204ENST00000467957 CXCL11O14625 94 aa22.54■■□□□ 1.2
YBX1-204ENST00000467957 IGHDP01880 384 aa22.54■■□□□ 1.2
YBX1-204ENST00000467957 HLA-DOAP06340 250 aa22.54■■□□□ 1.2
YBX1-204ENST00000467957 PTPRAP18433 802 aa22.54■■□□□ 1.2
YBX1-204ENST00000467957 SAP30BPQ9UHR5 308 aaKnown RBP22.54■■□□□ 1.2
YBX1-204ENST00000467957 DDX60LQ5H9U9 1706 aaKnown RBP22.54■■□□□ 1.2
YBX1-204ENST00000467957 LCORLQ8N3X6 602 aa22.53■■□□□ 1.2
YBX1-204ENST00000467957 ZCCHC17Q9NP64 241 aaKnown RBP22.53■■□□□ 1.2
YBX1-204ENST00000467957 STAP2Q9UGK3 403 aa22.53■■□□□ 1.2
YBX1-204ENST00000467957 GPR25O00155 361 aa22.52■■□□□ 1.2
YBX1-204ENST00000467957 CAP2P40123 477 aa22.52■■□□□ 1.2
YBX1-204ENST00000467957 SLFNL1Q499Z3 407 aa22.52■■□□□ 1.2
YBX1-204ENST00000467957 TTC6Q86TZ1 520 aa22.52■■□□□ 1.2
YBX1-204ENST00000467957 CRACR2BQ8N4Y2 399 aaPredicted RBP22.52■■□□□ 1.2
YBX1-204ENST00000467957 EHD4Q9H223 541 aa22.52■■□□□ 1.2
YBX1-204ENST00000467957 R3HDMLQ9H3Y0 253 aa22.52■■□□□ 1.2
YBX1-204ENST00000467957 DNAJC18Q9H819 358 aa22.52■■□□□ 1.2
YBX1-204ENST00000467957 AFG3L2Q9Y4W6 797 aa22.52■■□□□ 1.2
YBX1-204ENST00000467957 ZHX2Q9Y6X8 837 aa22.52■■□□□ 1.2
YBX1-204ENST00000467957 PHIPQ8WWQ0 1821 aa22.52■■□□□ 1.2
YBX1-204ENST00000467957 MBD4O95243 580 aa22.51■■□□□ 1.19
YBX1-204ENST00000467957 CHGBP05060 677 aa22.51■■□□□ 1.19
YBX1-204ENST00000467957 RRP1BQ14684 758 aaKnown RBP22.51■■□□□ 1.19
YBX1-204ENST00000467957 ARMT1Q9H993 441 aa22.51■■□□□ 1.19
YBX1-204ENST00000467957 NAV1Q8NEY1 1877 aa22.51■■□□□ 1.19
YBX1-204ENST00000467957 ATAD5Q96QE3 1844 aa22.5■■□□□ 1.19
YBX1-204ENST00000467957 ZFYP08048 801 aaPredicted RBP22.5■■□□□ 1.19
YBX1-204ENST00000467957 FAM43AQ8N2R8 423 aa22.5■■□□□ 1.19
YBX1-204ENST00000467957 ZNF296Q8WUU4 475 aaPredicted RBP22.5■■□□□ 1.19
YBX1-204ENST00000467957 TRIM34Q9BYJ4 488 aa22.5■■□□□ 1.19
YBX1-204ENST00000467957 TBC1D2Q9BYX2 928 aa22.5■■□□□ 1.19
YBX1-204ENST00000467957 GINM1Q9NU53 330 aa22.5■■□□□ 1.19
YBX1-204ENST00000467957 BTBD19C9JJ37 291 aa22.49■■□□□ 1.19
YBX1-204ENST00000467957 CRHR2Q13324 411 aa22.49■■□□□ 1.19
YBX1-204ENST00000467957 MOGSQ13724 837 aa22.49■■□□□ 1.19
YBX1-204ENST00000467957 LRRFIP1Q32MZ4 808 aaKnown RBP22.49■■□□□ 1.19
YBX1-204ENST00000467957 SDR42E1Q8WUS8 393 aa22.49■■□□□ 1.19
YBX1-204ENST00000467957 PUS7LQ9H0K6 701 aaKnown RBP22.49■■□□□ 1.19
YBX1-204ENST00000467957 DCP1AQ9NPI6 582 aaPredicted RBP22.49■■□□□ 1.19
YBX1-204ENST00000467957 ATP8A2Q9NTI2 1148 aa22.49■■□□□ 1.19
YBX1-204ENST00000467957 SERPINB13Q9UIV8 391 aa22.49■■□□□ 1.19
YBX1-204ENST00000467957 RNF113AO15541 343 aaKnown RBP22.48■■□□□ 1.19
YBX1-204ENST00000467957 PDE1AP54750 535 aa22.48■■□□□ 1.19
YBX1-204ENST00000467957 NUCB1Q02818 461 aa22.48■■□□□ 1.19
YBX1-204ENST00000467957 IFFO2Q5TF58 517 aa22.48■■□□□ 1.19
YBX1-204ENST00000467957 ANKRD23Q86SG2 305 aa22.48■■□□□ 1.19
YBX1-204ENST00000467957 APPBP2Q92624 585 aa22.48■■□□□ 1.19
YBX1-204ENST00000467957 LNPKQ9C0E8 428 aa22.48■■□□□ 1.19
YBX1-204ENST00000467957 A0A0G2JLL6 359 aaPredicted RBP22.47■■□□□ 1.19
YBX1-204ENST00000467957 FKTNO75072 461 aa22.47■■□□□ 1.19
YBX1-204ENST00000467957 ASNSP08243 561 aa22.47■■□□□ 1.19
YBX1-204ENST00000467957 PLCD1P51178 756 aa22.47■■□□□ 1.19
YBX1-204ENST00000467957 IRX6P78412 446 aaPredicted RBP22.47■■□□□ 1.19
YBX1-204ENST00000467957 TAF1CQ15572 869 aaPredicted RBP22.47■■□□□ 1.19
YBX1-204ENST00000467957 SLC4A8Q2Y0W8 1093 aa22.47■■□□□ 1.19
YBX1-204ENST00000467957 TATDN1Q6P1N9 297 aa22.47■■□□□ 1.19
YBX1-204ENST00000467957 PRRT2Q7Z6L0 340 aaPredicted RBP22.47■■□□□ 1.19
YBX1-204ENST00000467957 CHD1LQ86WJ1 897 aa22.47■■□□□ 1.19
YBX1-204ENST00000467957 ZFYVE28Q9HCC9 887 aa22.47■■□□□ 1.19
YBX1-204ENST00000467957 MCM9Q9NXL9 1143 aa22.47■■□□□ 1.19
YBX1-204ENST00000467957 TAOK2Q9UL54 1235 aa22.47■■□□□ 1.19
YBX1-204ENST00000467957 PTPRFP10586 1907 aa22.47■■□□□ 1.19
YBX1-204ENST00000467957 USP17L5A8MUK1 530 aa22.46■■□□□ 1.19
YBX1-204ENST00000467957 POLR3DP05423 398 aaPredicted RBP22.46■■□□□ 1.19
YBX1-204ENST00000467957 B4GALNT3Q6L9W6 998 aa22.46■■□□□ 1.19
YBX1-204ENST00000467957 FASTKD5Q7L8L6 764 aaKnown RBP22.46■■□□□ 1.19
YBX1-204ENST00000467957 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.46■■□□□ 1.19
YBX1-204ENST00000467957 PRKAB2O43741 272 aa22.45■■□□□ 1.18
YBX1-204ENST00000467957 GABPAQ06546 454 aa22.45■■□□□ 1.18
YBX1-204ENST00000467957 CTU1Q7Z7A3 348 aaKnown RBP22.45■■□□□ 1.18
YBX1-204ENST00000467957 CCDC84Q86UT8 332 aaPredicted RBP22.45■■□□□ 1.18
YBX1-204ENST00000467957 ZNF280CQ8ND82 737 aa22.45■■□□□ 1.18
YBX1-204ENST00000467957 OSBP2Q969R2 916 aa22.45■■□□□ 1.18
YBX1-204ENST00000467957 STRBPQ96SI9 672 aaKnown RBP22.45■■□□□ 1.18
YBX1-204ENST00000467957 JAG1P78504 1218 aa22.44■■□□□ 1.18
YBX1-204ENST00000467957 GPAT2Q6NUI2 795 aa22.44■■□□□ 1.18
YBX1-204ENST00000467957 WDR18Q9BV38 432 aa22.44■■□□□ 1.18
YBX1-204ENST00000467957 MCOLN1Q9GZU1 580 aa22.44■■□□□ 1.18
YBX1-204ENST00000467957 AS3MTQ9HBK9 375 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms