RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 TNRC6CQ9HCJ0 1690 aaKnown RBP6.49□□□□□ -1.37
TRIM27-204ENST00000467742 KHNYNO15037 678 aaKnown RBP6.48□□□□□ -1.37
TRIM27-204ENST00000467742 CABP4P57796 275 aa6.48□□□□□ -1.37
TRIM27-204ENST00000467742 CTBSQ01459 385 aa6.48□□□□□ -1.37
TRIM27-204ENST00000467742 R3HDM1Q15032 1099 aaKnown RBP6.48□□□□□ -1.37
TRIM27-204ENST00000467742 TMEM151AQ8N4L1 468 aa6.48□□□□□ -1.37
TRIM27-204ENST00000467742 RHPN1Q8TCX5 695 aa6.48□□□□□ -1.37
TRIM27-204ENST00000467742 RUNDC1Q96C34 613 aa6.48□□□□□ -1.37
TRIM27-204ENST00000467742 MKNK1Q9BUB5 465 aa6.48□□□□□ -1.37
TRIM27-204ENST00000467742 CCNL1Q9UK58 526 aaPredicted RBP6.48□□□□□ -1.37
TRIM27-204ENST00000467742 HCN4Q9Y3Q4 1203 aa6.48□□□□□ -1.37
TRIM27-204ENST00000467742 PNPLA7Q6ZV29 1317 aa6.48□□□□□ -1.37
TRIM27-204ENST00000467742 HEG1Q9ULI3 1381 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 LOC102724428A0A0B4J2F2 783 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 PRAMEF22A3QJZ6 481 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 APAF1O14727 1248 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 GDF11O95390 407 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 SIK1P57059 783 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 SH3PXD2AQ5TCZ1 1133 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 GALNT6Q8NCL4 622 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 C7orf43Q8WVR3 580 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 ZNF496Q96IT1 587 aaPredicted RBP6.47□□□□□ -1.37
TRIM27-204ENST00000467742 NEUROD4Q9HD90 331 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 MIS18AQ9NYP9 233 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 GGA1Q9UJY5 639 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 DNMT3AQ9Y6K1 912 aaPredicted RBP6.47□□□□□ -1.37
TRIM27-204ENST00000467742 UTRNP46939 3433 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 CACNA1FO60840 1977 aa6.47□□□□□ -1.37
TRIM27-204ENST00000467742 DDX60Q8IY21 1712 aaKnown RBP6.47□□□□□ -1.37
TRIM27-204ENST00000467742 SHISA8B8ZZ34 492 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 CD33P20138 364 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 BRD2P25440 801 aaKnown RBP6.46□□□□□ -1.38
TRIM27-204ENST00000467742 ADH6P28332 368 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 IRS1P35568 1242 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 RIPK4P57078 832 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 TEFQ10587 303 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 SLC15A2Q16348 729 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 C11orf91Q3C1V1 193 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 ZNF468Q5VIY5 522 aaPredicted RBP6.46□□□□□ -1.38
TRIM27-204ENST00000467742 C1orf229Q6ZS94 237 aaPredicted RBP6.46□□□□□ -1.38
TRIM27-204ENST00000467742 DNAJC10Q8IXB1 793 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 FAM9BQ8IZU0 186 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 BEND7Q8N7W2 519 aaPredicted RBP6.46□□□□□ -1.38
TRIM27-204ENST00000467742 HELQQ8TDG4 1101 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 EDARADDQ8WWZ3 215 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 MARK1Q9P0L2 795 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 HCN2Q9UL51 889 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 SPEF2Q9C093 1822 aa6.46□□□□□ -1.38
TRIM27-204ENST00000467742 EPXP11678 715 aa6.45□□□□□ -1.38
TRIM27-204ENST00000467742 NAA30Q147X3 362 aaPredicted RBP6.45□□□□□ -1.38
TRIM27-204ENST00000467742 KRT24Q2M2I5 525 aa6.45□□□□□ -1.38
TRIM27-204ENST00000467742 COX20Q5RI15 118 aa6.45□□□□□ -1.38
TRIM27-204ENST00000467742 IER5Q5VY09 327 aa6.45□□□□□ -1.38
TRIM27-204ENST00000467742 ZNF790Q6PG37 636 aa6.45□□□□□ -1.38
TRIM27-204ENST00000467742 LRRC69Q6ZNQ3 347 aa6.45□□□□□ -1.38
TRIM27-204ENST00000467742 GTF3C2Q8WUA4 911 aaPredicted RBP6.45□□□□□ -1.38
TRIM27-204ENST00000467742 SMARCC1Q92922 1105 aaPredicted RBP6.45□□□□□ -1.38
TRIM27-204ENST00000467742 SEPT3Q9UH03 358 aa6.45□□□□□ -1.38
TRIM27-204ENST00000467742 IVNS1ABPQ9Y6Y0 642 aa6.45□□□□□ -1.38
TRIM27-204ENST00000467742 CNTNAP4Q9C0A0 1308 aa6.45□□□□□ -1.38
TRIM27-204ENST00000467742 COL15A1P39059 1388 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 BTBD11A6QL63 1104 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 CCER2I3L3R5 266 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 HTATSF1O43719 755 aaKnown RBP6.44□□□□□ -1.38
TRIM27-204ENST00000467742 PIP4K2AP48426 406 aaPredicted RBP6.44□□□□□ -1.38
TRIM27-204ENST00000467742 FKBP4Q02790 459 aaKnown RBP eCLIP6.44□□□□□ -1.38
TRIM27-204ENST00000467742 RTF1Q92541 710 aaKnown RBP6.44□□□□□ -1.38
TRIM27-204ENST00000467742 STK32BQ9NY57 414 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 STIM2Q9P246 746 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 MKL2Q9ULH7 1088 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 ZBTB1Q9Y2K1 713 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 MYH3P11055 1940 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 SOS1Q07889 1333 aaPredicted RBP6.44□□□□□ -1.38
TRIM27-204ENST00000467742 CNTNAP5Q8WYK1 1306 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 ZNF521Q96K83 1311 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 A0A1B0GUL6 1792 aa6.44□□□□□ -1.38
TRIM27-204ENST00000467742 ARFGEF1Q9Y6D6 1849 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 TAF1P21675 1872 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 NEURL1BA8MQ27 555 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 TGFBR3LH3BV60 316 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 PIK3R2O00459 728 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 ICMTO60725 284 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 FAM13AO94988 1023 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 ABL1P00519 1130 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 ZNF853P0CG23 659 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 CYP19A1P11511 503 aaPredicted RBP6.43□□□□□ -1.38
TRIM27-204ENST00000467742 NPR3P17342 541 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 CRKLP46109 303 aaKnown RBP6.43□□□□□ -1.38
TRIM27-204ENST00000467742 EIF4A1P60842 406 aaKnown RBP6.43□□□□□ -1.38
TRIM27-204ENST00000467742 DGKZQ13574 1117 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 INTS5Q6P9B9 1019 aaKnown RBP6.43□□□□□ -1.38
TRIM27-204ENST00000467742 CAPN12Q6ZSI9 719 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 ALYREFQ86V81 257 aaKnown RBP6.43□□□□□ -1.38
TRIM27-204ENST00000467742 COL23A1Q86Y22 540 aaPredicted RBP6.43□□□□□ -1.38
TRIM27-204ENST00000467742 SUSD3Q96L08 255 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 PNNQ9H307 717 aaKnown RBP6.43□□□□□ -1.38
TRIM27-204ENST00000467742 LRFN2Q9ULH4 789 aa6.43□□□□□ -1.38
TRIM27-204ENST00000467742 COL4A1P02462 1669 aa6.42□□□□□ -1.38
TRIM27-204ENST00000467742 ZBTB7AO95365 584 aa6.42□□□□□ -1.38
TRIM27-204ENST00000467742 NEFMP07197 916 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms