RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 ZFPM1Q8IX07 1006 aa15.35■□□□□ 0.05
COL4A1-202ENST00000467182 IGDCC4Q8TDY8 1250 aa15.35■□□□□ 0.05
COL4A1-202ENST00000467182 DPF2Q92785 391 aa15.35■□□□□ 0.05
COL4A1-202ENST00000467182 BRF1Q92994 677 aa15.35■□□□□ 0.05
COL4A1-202ENST00000467182 DYNLL2Q96FJ2 89 aa15.35■□□□□ 0.05
COL4A1-202ENST00000467182 PRDM1O75626 825 aa15.34■□□□□ 0.05
COL4A1-202ENST00000467182 POLR3DP05423 398 aaPredicted RBP15.34■□□□□ 0.05
COL4A1-202ENST00000467182 GABPAQ06546 454 aa15.34■□□□□ 0.05
COL4A1-202ENST00000467182 DLGAP5Q15398 846 aa15.34■□□□□ 0.05
COL4A1-202ENST00000467182 SPDYE2Q495Y8 402 aa15.34■□□□□ 0.05
COL4A1-202ENST00000467182 C16orf86Q6ZW13 317 aa15.34■□□□□ 0.05
COL4A1-202ENST00000467182 OGFOD1Q8N543 542 aa15.34■□□□□ 0.05
COL4A1-202ENST00000467182 MTA3Q9BTC8 594 aa15.34■□□□□ 0.05
COL4A1-202ENST00000467182 SENP2Q9HC62 589 aa15.34■□□□□ 0.05
COL4A1-202ENST00000467182 MYOZ2Q9NPC6 264 aa15.34■□□□□ 0.05
COL4A1-202ENST00000467182 EGFRP00533 1210 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 SLC3A2P08195 630 aaKnown RBP15.33■□□□□ 0.04
COL4A1-202ENST00000467182 APOBRQ0VD83 1088 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 RRP12Q5JTH9 1297 aaKnown RBP15.33■□□□□ 0.04
COL4A1-202ENST00000467182 SLC44A5Q8NCS7 719 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 ESR2Q92731 530 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 INTS4Q96HW7 963 aaKnown RBP15.33■□□□□ 0.04
COL4A1-202ENST00000467182 TMEM87BQ96K49 555 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 LY9Q9HBG7 655 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 SH2B1Q9NRF2 756 aaPredicted RBP15.33■□□□□ 0.04
COL4A1-202ENST00000467182 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 ZNF70Q9UC06 446 aaPredicted RBP15.33■□□□□ 0.04
COL4A1-202ENST00000467182 BRPF3Q9ULD4 1205 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 GJA3Q9Y6H8 435 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 CNTNAP1P78357 1384 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 ATRNL1Q5VV63 1379 aa15.33■□□□□ 0.04
COL4A1-202ENST00000467182 DDTLA6NHG4 134 aaPredicted RBP15.32■□□□□ 0.04
COL4A1-202ENST00000467182 WNT10BO00744 389 aa15.32■□□□□ 0.04
COL4A1-202ENST00000467182 ENTPD3O75355 529 aa15.32■□□□□ 0.04
COL4A1-202ENST00000467182 RASA1P20936 1047 aa15.32■□□□□ 0.04
COL4A1-202ENST00000467182 CDK8P49336 464 aa15.32■□□□□ 0.04
COL4A1-202ENST00000467182 PDE4BQ07343 736 aa15.32■□□□□ 0.04
COL4A1-202ENST00000467182 SEC23AQ15436 765 aa15.32■□□□□ 0.04
COL4A1-202ENST00000467182 MICALL2Q8IY33 904 aa15.32■□□□□ 0.04
COL4A1-202ENST00000467182 AMOTL1Q8IY63 956 aa15.32■□□□□ 0.04
COL4A1-202ENST00000467182 RNF181Q9P0P0 153 aa15.32■□□□□ 0.04
COL4A1-202ENST00000467182 GREB1LQ9C091 1923 aaPredicted RBP15.32■□□□□ 0.04
COL4A1-202ENST00000467182 MYH8P13535 1937 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 PFKFB2O60825 505 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 PDIA3P30101 505 aaKnown RBP15.31■□□□□ 0.04
COL4A1-202ENST00000467182 NT5C2P49902 561 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 NBPF9Q3BBW0 867 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 C9orf131Q5VYM1 1079 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 TTC6Q86TZ1 520 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 SGMS1Q86VZ5 419 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 CCDC83Q8IWF9 413 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 GPC2Q8N158 579 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 NECAB1Q8N987 351 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 GTF3C6Q969F1 213 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 ZNF274Q96GC6 653 aaPredicted RBP15.31■□□□□ 0.04
COL4A1-202ENST00000467182 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 EHD4Q9H223 541 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 SLKQ9H2G2 1235 aaPredicted RBP15.31■□□□□ 0.04
COL4A1-202ENST00000467182 TOMM22Q9NS69 142 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 CNOT7Q9UIV1 285 aaKnown RBP15.31■□□□□ 0.04
COL4A1-202ENST00000467182 ANGEL1Q9UNK9 670 aaKnown RBP15.31■□□□□ 0.04
COL4A1-202ENST00000467182 HPS5Q9UPZ3 1129 aa15.31■□□□□ 0.04
COL4A1-202ENST00000467182 CLRN2A0PK11 232 aa15.3■□□□□ 0.04
COL4A1-202ENST00000467182 IFIT3O14879 490 aaKnown RBP15.3■□□□□ 0.04
COL4A1-202ENST00000467182 RANBP6O60518 1105 aaKnown RBP15.3■□□□□ 0.04
COL4A1-202ENST00000467182 SLURP2P0DP57 97 aa15.3■□□□□ 0.04
COL4A1-202ENST00000467182 LIFRP42702 1097 aa15.3■□□□□ 0.04
COL4A1-202ENST00000467182 TCP10Q12799 353 aa15.3■□□□□ 0.04
COL4A1-202ENST00000467182 TMEM67Q5HYA8 995 aa15.3■□□□□ 0.04
COL4A1-202ENST00000467182 FAM47AQ5JRC9 791 aa15.3■□□□□ 0.04
COL4A1-202ENST00000467182 FKBP1CQ5VVH2 108 aa15.3■□□□□ 0.04
COL4A1-202ENST00000467182 METTL16Q86W50 562 aaKnown RBP15.3■□□□□ 0.04
COL4A1-202ENST00000467182 DNAJC18Q9H819 358 aa15.3■□□□□ 0.04
COL4A1-202ENST00000467182 PGAP2Q9UHJ9 254 aa15.3■□□□□ 0.04
COL4A1-202ENST00000467182 NID2Q14112 1375 aa15.29■□□□□ 0.04
COL4A1-202ENST00000467182 TNKSO95271 1327 aa15.29■□□□□ 0.04
COL4A1-202ENST00000467182 KLF18A0A0U1RQI7 1052 aa15.29■□□□□ 0.04
COL4A1-202ENST00000467182 FGD1P98174 961 aa15.29■□□□□ 0.04
COL4A1-202ENST00000467182 SCRN1Q12765 414 aa15.29■□□□□ 0.04
COL4A1-202ENST00000467182 STK3Q13188 491 aa15.29■□□□□ 0.04
COL4A1-202ENST00000467182 SAMD7Q7Z3H4 446 aa15.29■□□□□ 0.04
COL4A1-202ENST00000467182 ENAHQ8N8S7 591 aaPredicted RBP15.29■□□□□ 0.04
COL4A1-202ENST00000467182 ZSCAN10Q96SZ4 725 aaPredicted RBP15.29■□□□□ 0.04
COL4A1-202ENST00000467182 DHX36Q9H2U1 1008 aaKnown RBP15.29■□□□□ 0.04
COL4A1-202ENST00000467182 GPRC5DQ9NZD1 345 aa15.29■□□□□ 0.04
COL4A1-202ENST00000467182 TCP10L2B9ZVM9 353 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 NMT2O60551 498 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 SHMT1P34896 483 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 TFAP4Q01664 338 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 WTAPQ15007 396 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 GPR162Q16538 588 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 RCSD1Q6JBY9 416 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 FAM151AQ8WW52 585 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 MKNK2Q9HBH9 465 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 IL17RBQ9NRM6 502 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 TCP11L1Q9NUJ3 509 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 SERPINB13Q9UIV8 391 aa15.28■□□□□ 0.04
COL4A1-202ENST00000467182 PLIN4Q96Q06 1357 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 ASTN2O75129 1339 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms