RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CSADQ9Y600 493 aa8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 DCDC2CA8MYV0 355 aa8.28□□□□□ -1.08
PRPF40A-205ENST00000467114 UBE3DQ7Z6J8 389 aa8.28□□□□□ -1.08
PRPF40A-205ENST00000467114 C12orf40Q86WS4 652 aa8.28□□□□□ -1.08
PRPF40A-205ENST00000467114 RC3H2Q9HBD1 1191 aaKnown RBP8.28□□□□□ -1.08
PRPF40A-205ENST00000467114 GTF2IRD1Q9UHL9 959 aa8.28□□□□□ -1.08
PRPF40A-205ENST00000467114 SPG7Q9UQ90 795 aa8.28□□□□□ -1.08
PRPF40A-205ENST00000467114 IVNS1ABPQ9Y6Y0 642 aa8.28□□□□□ -1.08
PRPF40A-205ENST00000467114 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
PRPF40A-205ENST00000467114 CARMIL2Q6F5E8 1435 aa8.28□□□□□ -1.08
PRPF40A-205ENST00000467114 FZD5Q13467 585 aa8.27□□□□□ -1.09
PRPF40A-205ENST00000467114 ANGEL2Q5VTE6 544 aaKnown RBP8.27□□□□□ -1.09
PRPF40A-205ENST00000467114 KCT2Q8NC54 265 aa8.27□□□□□ -1.09
PRPF40A-205ENST00000467114 PI4K2BQ8TCG2 481 aa8.27□□□□□ -1.09
PRPF40A-205ENST00000467114 C12orf49Q9H741 205 aa8.27□□□□□ -1.09
PRPF40A-205ENST00000467114 FAM8A1Q9UBU6 413 aa8.27□□□□□ -1.09
PRPF40A-205ENST00000467114 PCDHA4Q9UN74 947 aa8.27□□□□□ -1.09
PRPF40A-205ENST00000467114 C8AP07357 584 aa8.26□□□□□ -1.09
PRPF40A-205ENST00000467114 CELA3AP09093 270 aa8.26□□□□□ -1.09
PRPF40A-205ENST00000467114 ITIH2P19823 946 aa8.26□□□□□ -1.09
PRPF40A-205ENST00000467114 ATP2B2Q01814 1243 aa8.26□□□□□ -1.09
PRPF40A-205ENST00000467114 LRRN4CLQ8ND94 238 aa8.26□□□□□ -1.09
PRPF40A-205ENST00000467114 PICK1Q9NRD5 415 aa8.26□□□□□ -1.09
PRPF40A-205ENST00000467114 ARID1BQ8NFD5 2236 aaPredicted RBP8.26□□□□□ -1.09
PRPF40A-205ENST00000467114 PCNX4Q63HM2 1172 aa8.25□□□□□ -1.09
PRPF40A-205ENST00000467114 SLC23A3Q6PIS1 610 aa8.25□□□□□ -1.09
PRPF40A-205ENST00000467114 SPACA3Q8IXA5 215 aa8.25□□□□□ -1.09
PRPF40A-205ENST00000467114 EOMESO95936 686 aa8.24□□□□□ -1.09
PRPF40A-205ENST00000467114 USP17L7P0C7H9 530 aa8.24□□□□□ -1.09
PRPF40A-205ENST00000467114 CDC37L1Q7L3B6 337 aa8.24□□□□□ -1.09
PRPF40A-205ENST00000467114 ASB11Q8WXH4 323 aa8.24□□□□□ -1.09
PRPF40A-205ENST00000467114 LRIG2O94898 1065 aa8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 P4HBP07237 508 aaKnown RBP8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 JAG1P78504 1218 aa8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 INPP5AQ14642 412 aa8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 NKPD1Q17RQ9 610 aa8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 SV2BQ7L1I2 683 aa8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 ARMCX6Q7L4S7 300 aa8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 CYFIP1Q7L576 1253 aa8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 ZNF507Q8TCN5 953 aa8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 ELMO3Q96BJ8 720 aa8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 FRMD6Q96NE9 622 aa8.23□□□□□ -1.09
PRPF40A-205ENST00000467114 PTPN11Q06124 597 aaPredicted RBP8.22□□□□□ -1.09
PRPF40A-205ENST00000467114 LRFN4Q6PJG9 635 aa8.22□□□□□ -1.09
PRPF40A-205ENST00000467114 FAM168AQ92567 244 aa8.22□□□□□ -1.09
PRPF40A-205ENST00000467114 MAPK8IP1Q9UQF2 711 aa8.22□□□□□ -1.09
PRPF40A-205ENST00000467114 CLCN7P51798 805 aa8.21□□□□□ -1.1
PRPF40A-205ENST00000467114 FLAD1Q8NFF5 587 aa8.21□□□□□ -1.1
PRPF40A-205ENST00000467114 TMEM40Q8WWA1 233 aa8.21□□□□□ -1.1
PRPF40A-205ENST00000467114 GAL3ST3Q96A11 431 aa8.21□□□□□ -1.1
PRPF40A-205ENST00000467114 GNAT3A8MTJ3 354 aa8.2□□□□□ -1.1
PRPF40A-205ENST00000467114 PATL2C9JE40 543 aaKnown RBP8.2□□□□□ -1.1
PRPF40A-205ENST00000467114 SLITRK5O94991 958 aa8.2□□□□□ -1.1
PRPF40A-205ENST00000467114 LDHBP07195 334 aaKnown RBP8.2□□□□□ -1.1
PRPF40A-205ENST00000467114 CAP2P40123 477 aa8.2□□□□□ -1.1
PRPF40A-205ENST00000467114 IKZF1Q13422 519 aa8.2□□□□□ -1.1
PRPF40A-205ENST00000467114 HDXQ7Z353 690 aa8.2□□□□□ -1.1
PRPF40A-205ENST00000467114 AEBP1Q8IUX7 1158 aa8.2□□□□□ -1.1
PRPF40A-205ENST00000467114 PRDM5Q9NQX1 630 aaPredicted RBP8.2□□□□□ -1.1
PRPF40A-205ENST00000467114 PITPNM2Q9BZ72 1349 aa8.2□□□□□ -1.1
PRPF40A-205ENST00000467114 ZP2Q05996 745 aa8.19□□□□□ -1.1
PRPF40A-205ENST00000467114 SLBPQ14493 270 aaKnown RBP eCLIP8.19□□□□□ -1.1
PRPF40A-205ENST00000467114 C22orf34Q6ZV56 151 aa8.19□□□□□ -1.1
PRPF40A-205ENST00000467114 PLPPR2Q96GM1 343 aa8.19□□□□□ -1.1
PRPF40A-205ENST00000467114 FOXQ1Q9C009 403 aa8.19□□□□□ -1.1
PRPF40A-205ENST00000467114 WNT10AQ9GZT5 417 aa8.19□□□□□ -1.1
PRPF40A-205ENST00000467114 FBRSQ9HAH7 460 aa8.19□□□□□ -1.1
PRPF40A-205ENST00000467114 SNCAIPQ9Y6H5 919 aa8.19□□□□□ -1.1
PRPF40A-205ENST00000467114 PRAMEF27A3QJZ7 478 aa8.18□□□□□ -1.1
PRPF40A-205ENST00000467114 GNA15P30679 374 aa8.18□□□□□ -1.1
PRPF40A-205ENST00000467114 ZNF648Q5T619 568 aaPredicted RBP8.18□□□□□ -1.1
PRPF40A-205ENST00000467114 PRDM7Q9NQW5 492 aa8.18□□□□□ -1.1
PRPF40A-205ENST00000467114 TTF2Q9UNY4 1162 aaKnown RBP8.18□□□□□ -1.1
PRPF40A-205ENST00000467114 ZNF865P0CJ78 1059 aaPredicted RBP8.17□□□□□ -1.1
PRPF40A-205ENST00000467114 RPS26P62854 115 aaKnown RBP8.17□□□□□ -1.1
PRPF40A-205ENST00000467114 TTBK2Q6IQ55 1244 aa8.17□□□□□ -1.1
PRPF40A-205ENST00000467114 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.17□□□□□ -1.1
PRPF40A-205ENST00000467114 MFSD2AQ8NA29 543 aa8.17□□□□□ -1.1
PRPF40A-205ENST00000467114 LMCD1Q9NZU5 365 aa8.17□□□□□ -1.1
PRPF40A-205ENST00000467114 FARP2O94887 1054 aaPredicted RBP8.16□□□□□ -1.1
PRPF40A-205ENST00000467114 EIF4BP23588 611 aaKnown RBP8.16□□□□□ -1.1
PRPF40A-205ENST00000467114 TRIM26Q12899 539 aaPredicted RBP8.16□□□□□ -1.1
PRPF40A-205ENST00000467114 NKG7Q16617 165 aa8.16□□□□□ -1.1
PRPF40A-205ENST00000467114 CNTNAP4Q9C0A0 1308 aa8.16□□□□□ -1.1
PRPF40A-205ENST00000467114 SEMA3GQ9NS98 782 aa8.16□□□□□ -1.1
PRPF40A-205ENST00000467114 PRPF40AO75400 957 aaKnown RBP8.15□□□□□ -1.1
PRPF40A-205ENST00000467114 CDK8P49336 464 aa8.15□□□□□ -1.1
PRPF40A-205ENST00000467114 WIPI1Q5MNZ9 446 aaPredicted RBP8.15□□□□□ -1.1
PRPF40A-205ENST00000467114 HID1Q8IV36 788 aa8.15□□□□□ -1.1
PRPF40A-205ENST00000467114 CTNND2Q9UQB3 1225 aa8.15□□□□□ -1.1
PRPF40A-205ENST00000467114 AK5Q9Y6K8 562 aa8.15□□□□□ -1.1
PRPF40A-205ENST00000467114 PRR33A8MZF0 331 aa8.14□□□□□ -1.11
PRPF40A-205ENST00000467114 ETF1P62495 437 aaKnown RBP8.14□□□□□ -1.11
PRPF40A-205ENST00000467114 SFRP5Q5T4F7 317 aa8.14□□□□□ -1.11
PRPF40A-205ENST00000467114 SND1Q7KZF4 910 aaKnown RBP eCLIP8.14□□□□□ -1.11
PRPF40A-205ENST00000467114 ZSWIM9Q86XI8 627 aa8.14□□□□□ -1.11
PRPF40A-205ENST00000467114 MFSD4AQ8N468 514 aa8.14□□□□□ -1.11
PRPF40A-205ENST00000467114 HSPA12BQ96MM6 686 aa8.14□□□□□ -1.11
PRPF40A-205ENST00000467114 MIPEPQ99797 713 aa8.14□□□□□ -1.11
PRPF40A-205ENST00000467114 TPX2Q9ULW0 747 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms