RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 AKAP2Q9Y2D5 859 aa11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 ZNF316A6NFI3 1004 aaPredicted RBP11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 LDHCP07864 332 aa11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 GSTO1P78417 241 aa11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 PABPC4Q13310 644 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 NECAB2Q7Z6G3 386 aa11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 ANKRD13CQ8N6S4 541 aa11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 XAGE2Q96GT9 111 aa11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 HMGCRP04035 888 aa11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 MECOMQ03112 1051 aa11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 TREML2Q5T2D2 321 aa11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 TRMT2AQ8IZ69 625 aaKnown RBP11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 ZNF280CQ8ND82 737 aa11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPDC1-203ENST00000467049 A0A1B0GUL7 405 aa11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 SLURP2P0DP57 97 aa11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 BMP8BP34820 402 aa11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 TIMM10P62072 90 aa11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 SH3D19Q5HYK7 790 aa11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 CCDC84Q86UT8 332 aaPredicted RBP11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 ZNF384Q8TF68 577 aa11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 PAWRQ96IZ0 340 aaKnown RBP11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 NOB1Q9ULX3 412 aaKnown RBP11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 FRMPD3Q5JV73 1810 aa11.07□□□□□ -0.64
PTPDC1-203ENST00000467049 SPP2Q13103 211 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 MTX1Q13505 466 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 MEIS3Q99687 375 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 AS3MTQ9HBK9 375 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 MORF4L1Q9UBU8 362 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 GJD2Q9UKL4 321 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 TAOK2Q9UL54 1235 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 USP17L5A8MUK1 530 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 CAP2P40123 477 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 TFCP2Q12800 502 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 NSUN4Q96CB9 384 aaKnown RBP11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 HMG20BQ9P0W2 317 aa11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 HERC5Q9UII4 1024 aaKnown RBP11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 MYO5AQ9Y4I1 1855 aaKnown RBP11.06□□□□□ -0.64
PTPDC1-203ENST00000467049 RPTORQ8N122 1335 aa11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 FAM196BA6NMK8 535 aa11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 SOX1O00570 391 aaPredicted RBP11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 GNAI3P08754 354 aa11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 ARID4AP29374 1257 aaPredicted RBP11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 HMGCS2P54868 508 aa11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 DIS3LQ8TF46 1054 aaKnown RBP11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 GDF15Q99988 308 aa11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 WDR18Q9BV38 432 aa11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 ASCC2Q9H1I8 757 aaPredicted RBP11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 HMX1Q9NP08 348 aaPredicted RBP11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 STAP2Q9UGK3 403 aa11.05□□□□□ -0.64
PTPDC1-203ENST00000467049 MYH1P12882 1939 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 SRGAP3O43295 1099 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 SPATA5Q8NB90 893 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 CDCA7LQ96GN5 454 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 NBPF3Q9H094 633 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 GINM1Q9NU53 330 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 HOXA7P31268 230 aaPredicted RBP11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 RRP1BQ14684 758 aaKnown RBP11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 TEX11Q8IYF3 940 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 C7orf61Q8IZ16 206 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 SLC17A8Q8NDX2 589 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 ARHGAP45Q92619 1136 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 OGDHLQ9ULD0 1010 aa11.04□□□□□ -0.64
PTPDC1-203ENST00000467049 UQCRFS1P1P0C7P4 283 aa11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 GORABQ5T7V8 394 aa11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 MAP3K21Q5TCX8 1036 aa11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 GTF3C2Q8WUA4 911 aaPredicted RBP11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 SOCS4Q8WXH5 440 aa11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 LRCH3Q96II8 777 aa11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 NEUROD6Q96NK8 337 aa11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 NOL10Q9BSC4 688 aaKnown RBP11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 C11orf49Q9H6J7 331 aa11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 PI4KBQ9UBF8 816 aa11.03□□□□□ -0.64
PTPDC1-203ENST00000467049 C19orf81C9J6K1 198 aa11.02□□□□□ -0.64
PTPDC1-203ENST00000467049 IGSF3O75054 1194 aa11.02□□□□□ -0.64
PTPDC1-203ENST00000467049 ASNSP08243 561 aa11.02□□□□□ -0.64
PTPDC1-203ENST00000467049 XRCC5P13010 732 aaKnown RBP11.02□□□□□ -0.64
PTPDC1-203ENST00000467049 PLCG2P16885 1265 aa11.02□□□□□ -0.64
PTPDC1-203ENST00000467049 BACE1P56817 501 aa11.02□□□□□ -0.64
PTPDC1-203ENST00000467049 IRX3P78415 501 aaPredicted RBP11.02□□□□□ -0.64
PTPDC1-203ENST00000467049 TRIB2Q92519 343 aa11.02□□□□□ -0.64
PTPDC1-203ENST00000467049 TMOD4Q9NZQ9 345 aa11.02□□□□□ -0.64
PTPDC1-203ENST00000467049 DLL1O00548 723 aa11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 PPP4CP60510 307 aa11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 TRIM32Q13049 653 aa11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 LRIT3Q3SXY7 679 aa11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 PI16Q6UXB8 463 aa11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 TBC1D9Q6ZT07 1266 aa11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 METTL16Q86W50 562 aaKnown RBP11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 SH3RF3Q8TEJ3 882 aaPredicted RBP11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 NUDT12Q9BQG2 462 aa11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 ZMYND8Q9ULU4 1186 aaPredicted RBP11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.02□□□□□ -0.65
PTPDC1-203ENST00000467049 BAG3O95817 575 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms