RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SPACA3Q8IXA5 215 aa5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 MBNL3Q9NUK0 354 aaKnown RBP5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 RNF19AQ9NV58 838 aa5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 VAV3Q9UKW4 847 aa5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 SAMM50Q9Y512 469 aa5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 CARMIL2Q6F5E8 1435 aa5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 IGF2BP3O00425 579 aaKnown RBP eCLIP5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 EOMESO95936 686 aa5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 LDHBP07195 334 aaKnown RBP5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 RNASE1P07998 156 aaKnown RBP5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 GNA15P30679 374 aa5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 INPP5AQ14642 412 aa5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 LRRC14Q15048 493 aa5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 CYFIP1Q7L576 1253 aa5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 FBRSQ9HAH7 460 aa5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 PRDM10Q9NQV6 1147 aa5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 CYP8B1Q9UNU6 501 aa5.85□□□□□ -1.47
GTF3C3-209ENST00000466862 PRPF40AO75400 957 aaKnown RBP5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 ITIH2P19823 946 aa5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 CDK8P49336 464 aa5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 JAG1P78504 1218 aa5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 SV2BQ7L1I2 683 aa5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 ARMCX6Q7L4S7 300 aa5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 POU5F2Q8N7G0 328 aa5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 PLPPR2Q96GM1 343 aa5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 HRASLS5Q96KN8 279 aa5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 FRMD6Q96NE9 622 aa5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 PCDHA4Q9UN74 947 aa5.84□□□□□ -1.47
GTF3C3-209ENST00000466862 TMEM265A0A087WTH1 108 aa5.83□□□□□ -1.48
GTF3C3-209ENST00000466862 CAP2P40123 477 aa5.83□□□□□ -1.48
GTF3C3-209ENST00000466862 SLBPQ14493 270 aaKnown RBP eCLIP5.83□□□□□ -1.48
GTF3C3-209ENST00000466862 NKPD1Q17RQ9 610 aa5.83□□□□□ -1.48
GTF3C3-209ENST00000466862 C22orf34Q6ZV56 151 aa5.83□□□□□ -1.48
GTF3C3-209ENST00000466862 LRRN4CLQ8ND94 238 aa5.83□□□□□ -1.48
GTF3C3-209ENST00000466862 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
GTF3C3-209ENST00000466862 TTF2Q9UNY4 1162 aaKnown RBP5.83□□□□□ -1.48
GTF3C3-209ENST00000466862 PITPNM2Q9BZ72 1349 aa5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 LRIG2O94898 1065 aa5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 SLITRK5O94991 958 aa5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 RPS26P62854 115 aaKnown RBP5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 NKG7Q16617 165 aa5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 AOC3Q16853 763 aa5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 TTBK2Q6IQ55 1244 aa5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 ATG4DQ86TL0 474 aaPredicted RBP5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 ASIC4Q96FT7 647 aa5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 SSU72Q9NP77 194 aaKnown RBP5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 MAPK8IP1Q9UQF2 711 aa5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 SNX11Q9Y5W9 270 aa5.82□□□□□ -1.48
GTF3C3-209ENST00000466862 PATL2C9JE40 543 aaKnown RBP5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 ZNF865P0CJ78 1059 aaPredicted RBP5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 WIPI1Q5MNZ9 446 aaPredicted RBP5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 ANGEL2Q5VTE6 544 aaKnown RBP5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 SND1Q7KZF4 910 aaKnown RBP eCLIP5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 NPAS4Q8IUM7 802 aa5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 KCT2Q8NC54 265 aa5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 FLAD1Q8NFF5 587 aa5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 ELMO3Q96BJ8 720 aa5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 RC3H2Q9HBD1 1191 aaKnown RBP5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 GTF2IRD1Q9UHL9 959 aa5.81□□□□□ -1.48
GTF3C3-209ENST00000466862 CNTNAP4Q9C0A0 1308 aa5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 PRAMEF27A3QJZ7 478 aa5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 RBAK-RBAKDNI3L0D1 243 aa5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 EIF4BP23588 611 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 CLCN7P51798 805 aa5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 SEPT6Q14141 434 aa5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 DNAJC14Q6Y2X3 702 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 DUSP9Q99956 384 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 WNT10AQ9GZT5 417 aa5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 AK5Q9Y6K8 562 aa5.8□□□□□ -1.48
GTF3C3-209ENST00000466862 PRR33A8MZF0 331 aa5.79□□□□□ -1.48
GTF3C3-209ENST00000466862 GFRA2O00451 464 aa5.79□□□□□ -1.48
GTF3C3-209ENST00000466862 SLC23A3Q6PIS1 610 aa5.79□□□□□ -1.48
GTF3C3-209ENST00000466862 AGMOQ6ZNB7 445 aa5.79□□□□□ -1.48
GTF3C3-209ENST00000466862 ARHGAP27Q6ZUM4 889 aa5.79□□□□□ -1.48
GTF3C3-209ENST00000466862 ZNF507Q8TCN5 953 aa5.79□□□□□ -1.48
GTF3C3-209ENST00000466862 FOXQ1Q9C009 403 aa5.79□□□□□ -1.48
GTF3C3-209ENST00000466862 PRDM5Q9NQX1 630 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-209ENST00000466862 PCDHB5Q9Y5E4 795 aa5.79□□□□□ -1.48
GTF3C3-209ENST00000466862 SNCAIPQ9Y6H5 919 aa5.79□□□□□ -1.48
GTF3C3-209ENST00000466862 ANKRD33BA6NCL7 494 aa5.78□□□□□ -1.48
GTF3C3-209ENST00000466862 C8AP07357 584 aa5.78□□□□□ -1.48
GTF3C3-209ENST00000466862 LIG3P49916 1009 aa5.78□□□□□ -1.48
GTF3C3-209ENST00000466862 CCDC85BQ15834 202 aaPredicted RBP5.78□□□□□ -1.48
GTF3C3-209ENST00000466862 MEI1Q5TIA1 1274 aa5.78□□□□□ -1.48
GTF3C3-209ENST00000466862 HDXQ7Z353 690 aa5.78□□□□□ -1.48
GTF3C3-209ENST00000466862 PRDM7Q9NQW5 492 aa5.78□□□□□ -1.48
GTF3C3-209ENST00000466862 PICK1Q9NRD5 415 aa5.78□□□□□ -1.48
GTF3C3-209ENST00000466862 SEMA3GQ9NS98 782 aa5.78□□□□□ -1.48
GTF3C3-209ENST00000466862 CTSHP09668 335 aa5.77□□□□□ -1.49
GTF3C3-209ENST00000466862 TFE3P19532 575 aaPredicted RBP5.77□□□□□ -1.49
GTF3C3-209ENST00000466862 PRAMEF13Q5VWM6 474 aa5.77□□□□□ -1.49
GTF3C3-209ENST00000466862 FBXO33Q7Z6M2 555 aa5.77□□□□□ -1.49
GTF3C3-209ENST00000466862 PI4K2BQ8TCG2 481 aa5.77□□□□□ -1.49
GTF3C3-209ENST00000466862 ASB11Q8WXH4 323 aa5.77□□□□□ -1.49
GTF3C3-209ENST00000466862 MIPEPQ99797 713 aa5.77□□□□□ -1.49
GTF3C3-209ENST00000466862 TACC3Q9Y6A5 838 aa5.77□□□□□ -1.49
GTF3C3-209ENST00000466862 CAPN6Q9Y6Q1 641 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms