RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 FANCBQ8NB91 859 aa23.82■■□□□ 1.4
CCDC78-207ENST00000466708 TBC1D22AQ8WUA7 517 aa23.82■■□□□ 1.4
CCDC78-207ENST00000466708 DACT1Q9NYF0 836 aa23.82■■□□□ 1.4
CCDC78-207ENST00000466708 ATP6V0A2Q9Y487 856 aa23.82■■□□□ 1.4
CCDC78-207ENST00000466708 LTBP1Q14766 1721 aa23.82■■□□□ 1.4
CCDC78-207ENST00000466708 PDE4BQ07343 736 aa23.82■■□□□ 1.4
CCDC78-207ENST00000466708 MYSM1Q5VVJ2 828 aa23.82■■□□□ 1.4
CCDC78-207ENST00000466708 POLR3EQ9NVU0 708 aa23.82■■□□□ 1.4
CCDC78-207ENST00000466708 RGPD3A6NKT7 1758 aaPredicted RBP23.81■■□□□ 1.4
CCDC78-207ENST00000466708 RGPD4Q7Z3J3 1758 aa23.81■■□□□ 1.4
CCDC78-207ENST00000466708 SRGNP10124 158 aa23.81■■□□□ 1.4
CCDC78-207ENST00000466708 ALDH1B1P30837 517 aa23.81■■□□□ 1.4
CCDC78-207ENST00000466708 PDE6BP35913 854 aa23.81■■□□□ 1.4
CCDC78-207ENST00000466708 UVSSAQ2YD98 709 aa23.81■■□□□ 1.4
CCDC78-207ENST00000466708 KRT40Q6A162 431 aa23.81■■□□□ 1.4
CCDC78-207ENST00000466708 ENAHQ8N8S7 591 aaPredicted RBP23.81■■□□□ 1.4
CCDC78-207ENST00000466708 FUCA2Q9BTY2 467 aa23.81■■□□□ 1.4
CCDC78-207ENST00000466708 SLC26A6Q9BXS9 759 aa23.81■■□□□ 1.4
CCDC78-207ENST00000466708 MKRN1Q9UHC7 482 aaKnown RBP23.81■■□□□ 1.4
CCDC78-207ENST00000466708 PARP3Q9Y6F1 533 aa23.81■■□□□ 1.4
CCDC78-207ENST00000466708 MROH7-TTC4A0A0A0MT08 1334 aa23.81■■□□□ 1.4
CCDC78-207ENST00000466708 C6orf229H3BNL8 230 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 SMIM22K7EJ46 135 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 YEATS4O95619 227 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 MAP3K11Q16584 847 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 IFIT1BQ5T764 474 aaKnown RBP23.8■■□□□ 1.4
CCDC78-207ENST00000466708 SLF2Q8IX21 1173 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 MCM9Q9NXL9 1143 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 DLEC1Q9Y238 1755 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 CALM1P0DP23 149 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 CALM2P0DP24 149 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 CALM3P0DP25 149 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 USP5P45974 858 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 CATIPQ7Z7H3 387 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 FTOQ9C0B1 505 aaKnown RBP eCLIP23.8■■□□□ 1.4
CCDC78-207ENST00000466708 CLSTN2Q9H4D0 955 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 GJB4Q9NTQ9 266 aa23.8■■□□□ 1.4
CCDC78-207ENST00000466708 ECM29Q5VYK3 1845 aa23.79■■□□□ 1.4
CCDC78-207ENST00000466708 POLR3DP05423 398 aaPredicted RBP23.79■■□□□ 1.4
CCDC78-207ENST00000466708 AMOTL1Q8IY63 956 aa23.79■■□□□ 1.4
CCDC78-207ENST00000466708 CRACR2BQ8N4Y2 399 aaPredicted RBP23.79■■□□□ 1.4
CCDC78-207ENST00000466708 KCNG4Q8TDN1 519 aa23.79■■□□□ 1.4
CCDC78-207ENST00000466708 TRIM44Q96DX7 344 aaPredicted RBP23.79■■□□□ 1.4
CCDC78-207ENST00000466708 TNMDQ9H2S6 317 aa23.79■■□□□ 1.4
CCDC78-207ENST00000466708 FAM205AQ6ZU69 1335 aa23.78■■□□□ 1.4
CCDC78-207ENST00000466708 PRDM1O75626 825 aa23.78■■□□□ 1.4
CCDC78-207ENST00000466708 DEXIO95424 95 aa23.78■■□□□ 1.4
CCDC78-207ENST00000466708 CCDC192P0DO97 292 aa23.78■■□□□ 1.4
CCDC78-207ENST00000466708 C12orf60Q5U649 245 aa23.78■■□□□ 1.4
CCDC78-207ENST00000466708 RBM43Q6ZSC3 357 aaKnown RBP23.78■■□□□ 1.4
CCDC78-207ENST00000466708 LINC00301Q8NCQ3 95 aa23.78■■□□□ 1.4
CCDC78-207ENST00000466708 RNF214Q8ND24 703 aa23.78■■□□□ 1.4
CCDC78-207ENST00000466708 NUP133Q8WUM0 1156 aa23.78■■□□□ 1.4
CCDC78-207ENST00000466708 FAM163AQ96GL9 167 aaPredicted RBP23.78■■□□□ 1.4
CCDC78-207ENST00000466708 AIFM3Q96NN9 605 aa23.78■■□□□ 1.4
CCDC78-207ENST00000466708 KIF28PB7ZC32 967 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 NR1I2O75469 434 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 MMP10P09238 476 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 PLCG2P16885 1265 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 U2AF2P26368 475 aaKnown RBP eCLIP23.77■■□□□ 1.4
CCDC78-207ENST00000466708 ME1P48163 572 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 DIXDC1Q155Q3 683 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 GRIK5Q16478 980 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 NBPF11Q86T75 865 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 SH3RF3Q8TEJ3 882 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-207ENST00000466708 PDLIM2Q96JY6 352 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 RBM28Q9NW13 759 aaKnown RBP23.77■■□□□ 1.4
CCDC78-207ENST00000466708 TNS1Q9HBL0 1735 aaKnown RBP23.77■■□□□ 1.4
CCDC78-207ENST00000466708 DDAH1O94760 285 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 STK38Q15208 465 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 CCAR1Q8IX12 1150 aaKnown RBP23.77■■□□□ 1.4
CCDC78-207ENST00000466708 FAM43AQ8N2R8 423 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 RTFDC1Q9BY42 306 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-207ENST00000466708 COA1Q9GZY4 146 aa23.77■■□□□ 1.4
CCDC78-207ENST00000466708 ROBO3Q96MS0 1386 aa23.76■■□□□ 1.39
CCDC78-207ENST00000466708 GNL2Q13823 731 aaKnown RBP23.76■■□□□ 1.39
CCDC78-207ENST00000466708 ADALQ6DHV7 355 aa23.76■■□□□ 1.39
CCDC78-207ENST00000466708 CCDC73Q6ZRK6 1079 aa23.76■■□□□ 1.39
CCDC78-207ENST00000466708 RNF26Q9BY78 433 aaPredicted RBP23.76■■□□□ 1.39
CCDC78-207ENST00000466708 GPR75-ASB3A0A0A6YYF3 556 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 A0A1W2PQ27 194 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 A0A1W2PQ64 194 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 A0A1W2PQD8 194 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 MFSD14BQ5SR56 506 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 MASTLQ96GX5 879 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 TMX4Q9H1E5 349 aaPredicted RBP23.75■■□□□ 1.39
CCDC78-207ENST00000466708 SUGT1Q9Y2Z0 365 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 USP17L8P0C7I0 530 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 CYP2D6P10635 497 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 SAFBQ15424 915 aaKnown RBP eCLIP23.75■■□□□ 1.39
CCDC78-207ENST00000466708 SF3A1Q15459 793 aaKnown RBP23.75■■□□□ 1.39
CCDC78-207ENST00000466708 ANO1Q5XXA6 986 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 MPNDQ8N594 471 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 PCDHA7Q9UN72 937 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 CLIC4Q9Y696 253 aa23.75■■□□□ 1.39
CCDC78-207ENST00000466708 SPTLC2O15270 562 aa23.74■■□□□ 1.39
CCDC78-207ENST00000466708 CTAGE5O15320 804 aa23.74■■□□□ 1.39
CCDC78-207ENST00000466708 TROAPQ12815 778 aa23.74■■□□□ 1.39
CCDC78-207ENST00000466708 CAMK4Q16566 473 aa23.74■■□□□ 1.39
CCDC78-207ENST00000466708 TSPY2A6NKD2 308 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms