RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 OSBPP22059 807 aa23.51■■□□□ 1.35
COL9A3-206ENST00000466532 HOXD10P28358 340 aa23.51■■□□□ 1.35
COL9A3-206ENST00000466532 NAA16Q6N069 864 aaPredicted RBP23.51■■□□□ 1.35
COL9A3-206ENST00000466532 CCDC84Q86UT8 332 aaPredicted RBP23.51■■□□□ 1.35
COL9A3-206ENST00000466532 DOCK3Q8IZD9 2030 aa23.5■■□□□ 1.35
COL9A3-206ENST00000466532 ZBTB7BO15156 539 aaPredicted RBP23.5■■□□□ 1.35
COL9A3-206ENST00000466532 SH3RF3Q8TEJ3 882 aaPredicted RBP23.5■■□□□ 1.35
COL9A3-206ENST00000466532 SLC45A1Q9Y2W3 748 aa23.5■■□□□ 1.35
COL9A3-206ENST00000466532 NOP58Q9Y2X3 529 aaKnown RBP23.5■■□□□ 1.35
COL9A3-206ENST00000466532 MYPNQ86TC9 1320 aa23.5■■□□□ 1.35
COL9A3-206ENST00000466532 RAET1EQ8TD07 263 aa23.49■■□□□ 1.35
COL9A3-206ENST00000466532 AATFQ9NY61 560 aaKnown RBP eCLIP23.49■■□□□ 1.35
COL9A3-206ENST00000466532 BAG3O95817 575 aa23.48■■□□□ 1.35
COL9A3-206ENST00000466532 CYP2E1P05181 493 aaPredicted RBP23.48■■□□□ 1.35
COL9A3-206ENST00000466532 FCGRTP55899 365 aa23.48■■□□□ 1.35
COL9A3-206ENST00000466532 ZNF512BQ96KM6 892 aaPredicted RBP23.47■■□□□ 1.35
COL9A3-206ENST00000466532 DBNLQ9UJU6 430 aaKnown RBP23.47■■□□□ 1.35
COL9A3-206ENST00000466532 ZBED9Q6R2W3 1325 aa23.47■■□□□ 1.35
COL9A3-206ENST00000466532 PLCG2P16885 1265 aa23.46■■□□□ 1.35
COL9A3-206ENST00000466532 GRK4P32298 578 aa23.46■■□□□ 1.35
COL9A3-206ENST00000466532 ZAP70P43403 619 aa23.46■■□□□ 1.35
COL9A3-206ENST00000466532 ADGRA1Q86SQ6 560 aa23.46■■□□□ 1.35
COL9A3-206ENST00000466532 SMCR8Q8TEV9 937 aaPredicted RBP23.46■■□□□ 1.35
COL9A3-206ENST00000466532 CCDC8Q9H0W5 538 aaPredicted RBP23.46■■□□□ 1.35
COL9A3-206ENST00000466532 TLR7Q9NYK1 1049 aaKnown RBP23.46■■□□□ 1.35
COL9A3-206ENST00000466532 HERC5Q9UII4 1024 aaKnown RBP23.46■■□□□ 1.35
COL9A3-206ENST00000466532 AGTPBP1Q9UPW5 1226 aa23.46■■□□□ 1.35
COL9A3-206ENST00000466532 CAP2P40123 477 aa23.45■■□□□ 1.34
COL9A3-206ENST00000466532 PRKCZQ05513 592 aa23.45■■□□□ 1.34
COL9A3-206ENST00000466532 PPP4CP60510 307 aa23.44■■□□□ 1.34
COL9A3-206ENST00000466532 SPP2Q13103 211 aa23.44■■□□□ 1.34
COL9A3-206ENST00000466532 RRP1BQ14684 758 aaKnown RBP23.44■■□□□ 1.34
COL9A3-206ENST00000466532 MTFR1Q15390 333 aa23.44■■□□□ 1.34
COL9A3-206ENST00000466532 TREML2Q5T2D2 321 aa23.44■■□□□ 1.34
COL9A3-206ENST00000466532 CEP85Q6P2H3 762 aa23.44■■□□□ 1.34
COL9A3-206ENST00000466532 MAPKAPK5Q8IW41 473 aa23.44■■□□□ 1.34
COL9A3-206ENST00000466532 ZNF280CQ8ND82 737 aa23.44■■□□□ 1.34
COL9A3-206ENST00000466532 TGFBRAP1Q8WUH2 860 aa23.44■■□□□ 1.34
COL9A3-206ENST00000466532 EAF2Q96CJ1 260 aaPredicted RBP23.44■■□□□ 1.34
COL9A3-206ENST00000466532 DHX36Q9H2U1 1008 aaKnown RBP23.44■■□□□ 1.34
COL9A3-206ENST00000466532 PIH1D3Q9NQM4 214 aaKnown RBP23.44■■□□□ 1.34
COL9A3-206ENST00000466532 PI4KBQ9UBF8 816 aa23.44■■□□□ 1.34
COL9A3-206ENST00000466532 PROCA1Q8NCQ7 364 aaPredicted RBP23.43■■□□□ 1.34
COL9A3-206ENST00000466532 PANK1Q8TE04 598 aa23.43■■□□□ 1.34
COL9A3-206ENST00000466532 GCC1Q96CN9 775 aa23.43■■□□□ 1.34
COL9A3-206ENST00000466532 TBC1D2Q9BYX2 928 aa23.43■■□□□ 1.34
COL9A3-206ENST00000466532 PNMA3Q9UL41 463 aa23.43■■□□□ 1.34
COL9A3-206ENST00000466532 FLT1P17948 1338 aa23.42■■□□□ 1.34
COL9A3-206ENST00000466532 USP17L5A8MUK1 530 aa23.42■■□□□ 1.34
COL9A3-206ENST00000466532 IGSF3O75054 1194 aa23.42■■□□□ 1.34
COL9A3-206ENST00000466532 BIN2Q9UBW5 565 aaPredicted RBP23.42■■□□□ 1.34
COL9A3-206ENST00000466532 GABRQQ9UN88 632 aa23.42■■□□□ 1.34
COL9A3-206ENST00000466532 HMGCS2P54868 508 aa23.41■■□□□ 1.34
COL9A3-206ENST00000466532 AS3MTQ9HBK9 375 aa23.41■■□□□ 1.34
COL9A3-206ENST00000466532 EXOC6BQ9Y2D4 811 aa23.41■■□□□ 1.34
COL9A3-206ENST00000466532 IDH1O75874 414 aaKnown RBP23.4■■□□□ 1.34
COL9A3-206ENST00000466532 UBXN2AP68543 259 aa23.4■■□□□ 1.34
COL9A3-206ENST00000466532 ERC1Q8IUD2 1116 aa23.4■■□□□ 1.34
COL9A3-206ENST00000466532 ANKRD13CQ8N6S4 541 aa23.4■■□□□ 1.34
COL9A3-206ENST00000466532 TRIM34Q9BYJ4 488 aa23.4■■□□□ 1.34
COL9A3-206ENST00000466532 NAV1Q8NEY1 1877 aa23.39■■□□□ 1.34
COL9A3-206ENST00000466532 TNPO2O14787 897 aaKnown RBP23.39■■□□□ 1.33
COL9A3-206ENST00000466532 CCL5P13501 91 aa23.39■■□□□ 1.33
COL9A3-206ENST00000466532 CYP7A1P22680 504 aa23.39■■□□□ 1.33
COL9A3-206ENST00000466532 DYNLL1P63167 89 aaKnown RBP23.39■■□□□ 1.33
COL9A3-206ENST00000466532 CRACR2BQ8N4Y2 399 aaPredicted RBP23.39■■□□□ 1.33
COL9A3-206ENST00000466532 SLAIN1Q8ND83 568 aa23.39■■□□□ 1.33
COL9A3-206ENST00000466532 SHISA4Q96DD7 197 aa23.39■■□□□ 1.33
COL9A3-206ENST00000466532 PALD1Q9ULE6 856 aa23.39■■□□□ 1.33
COL9A3-206ENST00000466532 NDUFB9Q9Y6M9 179 aa23.39■■□□□ 1.33
COL9A3-206ENST00000466532 FLT3LGP49771 235 aa23.38■■□□□ 1.33
COL9A3-206ENST00000466532 PABPC4Q13310 644 aaKnown RBP eCLIP23.38■■□□□ 1.33
COL9A3-206ENST00000466532 AACSQ86V21 672 aa23.38■■□□□ 1.33
COL9A3-206ENST00000466532 FOXP4Q8IVH2 680 aaPredicted RBP23.38■■□□□ 1.33
COL9A3-206ENST00000466532 DNAJC18Q9H819 358 aa23.38■■□□□ 1.33
COL9A3-206ENST00000466532 SAP30BPQ9UHR5 308 aaKnown RBP23.38■■□□□ 1.33
COL9A3-206ENST00000466532 ADCY3O60266 1144 aa23.37■■□□□ 1.33
COL9A3-206ENST00000466532 ASNSP08243 561 aa23.37■■□□□ 1.33
COL9A3-206ENST00000466532 FAM110CQ1W6H9 321 aa23.37■■□□□ 1.33
COL9A3-206ENST00000466532 SH3D19Q5HYK7 790 aa23.37■■□□□ 1.33
COL9A3-206ENST00000466532 MAGEB6Q8N7X4 407 aa23.37■■□□□ 1.33
COL9A3-206ENST00000466532 NKX2-3Q8TAU0 364 aa23.37■■□□□ 1.33
COL9A3-206ENST00000466532 RNF208Q9H0X6 261 aa23.37■■□□□ 1.33
COL9A3-206ENST00000466532 PLXNB2O15031 1838 aa23.37■■□□□ 1.33
COL9A3-206ENST00000466532 HLA-DOAP06340 250 aa23.36■■□□□ 1.33
COL9A3-206ENST00000466532 GJB1P08034 283 aa23.36■■□□□ 1.33
COL9A3-206ENST00000466532 MS4A1P11836 297 aa23.36■■□□□ 1.33
COL9A3-206ENST00000466532 MTMR2Q13614 643 aa23.36■■□□□ 1.33
COL9A3-206ENST00000466532 METTL16Q86W50 562 aaKnown RBP23.36■■□□□ 1.33
COL9A3-206ENST00000466532 MIGA1Q8NAN2 632 aa23.36■■□□□ 1.33
COL9A3-206ENST00000466532 WDR18Q9BV38 432 aa23.36■■□□□ 1.33
COL9A3-206ENST00000466532 MYH8P13535 1937 aa23.35■■□□□ 1.33
COL9A3-206ENST00000466532 GDF11O95390 407 aa23.35■■□□□ 1.33
COL9A3-206ENST00000466532 ELNP15502 786 aa23.35■■□□□ 1.33
COL9A3-206ENST00000466532 GJA8P48165 433 aa23.35■■□□□ 1.33
COL9A3-206ENST00000466532 GCLCP48506 637 aaPredicted RBP23.35■■□□□ 1.33
COL9A3-206ENST00000466532 JAG1P78504 1218 aa23.35■■□□□ 1.33
COL9A3-206ENST00000466532 IRF5Q13568 498 aa23.35■■□□□ 1.33
COL9A3-206ENST00000466532 HSP90AB4PQ58FF6 505 aa23.35■■□□□ 1.33
COL9A3-206ENST00000466532 PXYLP1Q8TE99 480 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms