RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 NUP62CLQ9H1M0 184 aa15.77■□□□□ 0.12
UBE4B-206ENST00000466379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.12
UBE4B-206ENST00000466379 LRRC37AA6NMS7 1700 aa15.77■□□□□ 0.12
UBE4B-206ENST00000466379 LTBP1Q14766 1721 aa15.77■□□□□ 0.11
UBE4B-206ENST00000466379 TNS1Q9HBL0 1735 aaKnown RBP15.77■□□□□ 0.11
UBE4B-206ENST00000466379 NRXN2Q9P2S2 1712 aa15.77■□□□□ 0.11
UBE4B-206ENST00000466379 FMNL1O95466 1100 aaPredicted RBP15.77■□□□□ 0.11
UBE4B-206ENST00000466379 SRGNP10124 158 aa15.77■□□□□ 0.11
UBE4B-206ENST00000466379 ANP32BQ92688 251 aaKnown RBP15.77■□□□□ 0.11
UBE4B-206ENST00000466379 ARPP21Q9UBL0 812 aaPredicted RBP15.77■□□□□ 0.11
UBE4B-206ENST00000466379 NID2Q14112 1375 aa15.76■□□□□ 0.11
UBE4B-206ENST00000466379 COL11A2P13942 1736 aaPredicted RBP15.76■□□□□ 0.11
UBE4B-206ENST00000466379 FGRP09769 529 aa15.76■□□□□ 0.11
UBE4B-206ENST00000466379 CCDC173Q0VFZ6 552 aa15.76■□□□□ 0.11
UBE4B-206ENST00000466379 SP8Q8IXZ3 490 aa15.76■□□□□ 0.11
UBE4B-206ENST00000466379 TMTC2Q8N394 836 aa15.76■□□□□ 0.11
UBE4B-206ENST00000466379 FANCBQ8NB91 859 aa15.76■□□□□ 0.11
UBE4B-206ENST00000466379 MTA3Q9BTC8 594 aa15.76■□□□□ 0.11
UBE4B-206ENST00000466379 FUCA2Q9BTY2 467 aa15.76■□□□□ 0.11
UBE4B-206ENST00000466379 IFNAR1P17181 557 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 ME1P48163 572 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 GSTO1P78417 241 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 IFIT1BQ5T764 474 aaKnown RBP15.75■□□□□ 0.11
UBE4B-206ENST00000466379 MYSM1Q5VVJ2 828 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 CKAP2LQ8IYA6 745 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 TGFBRAP1Q8WUH2 860 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 DYNLL2Q96FJ2 89 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 GOLPH3LQ9H4A5 285 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 ATP6V0A2Q9Y487 856 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 PARP3Q9Y6F1 533 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 MROH7-TTC4A0A0A0MT08 1334 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 SBK1Q52WX2 424 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 MFSD14BQ5SR56 506 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 ATL3Q6DD88 541 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 NBPF11Q86T75 865 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 IQCA1Q86XH1 822 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 CCAR1Q8IX12 1150 aaKnown RBP15.75■□□□□ 0.11
UBE4B-206ENST00000466379 FBXW7Q969H0 707 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 PPP1R9BQ96SB3 815 aa15.75■□□□□ 0.11
UBE4B-206ENST00000466379 RTFDC1Q9BY42 306 aaPredicted RBP15.75■□□□□ 0.11
UBE4B-206ENST00000466379 BTDP43251 543 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 BRAPQ7Z569 592 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 MAPKAPK5Q8IW41 473 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 TNMDQ9H2S6 317 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 RTEL1Q9NZ71 1219 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 MKRN1Q9UHC7 482 aaKnown RBP15.74■□□□□ 0.11
UBE4B-206ENST00000466379 SAP30BPQ9UHR5 308 aaKnown RBP15.74■□□□□ 0.11
UBE4B-206ENST00000466379 STK36Q9NRP7 1315 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 ORC4O43929 436 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 BAG3O95817 575 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 NPR1P16066 1061 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 HMGB2P26583 209 aaKnown RBP15.74■□□□□ 0.11
UBE4B-206ENST00000466379 GNL2Q13823 731 aaKnown RBP15.74■□□□□ 0.11
UBE4B-206ENST00000466379 MAP3K11Q16584 847 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 CRACR2BQ8N4Y2 399 aaPredicted RBP15.74■□□□□ 0.11
UBE4B-206ENST00000466379 NOL10Q9BSC4 688 aaKnown RBP15.74■□□□□ 0.11
UBE4B-206ENST00000466379 RGS17Q9UGC6 210 aaPredicted RBP15.74■□□□□ 0.11
UBE4B-206ENST00000466379 DLEC1Q9Y238 1755 aa15.74■□□□□ 0.11
UBE4B-206ENST00000466379 NAV1Q8NEY1 1877 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.73■□□□□ 0.11
UBE4B-206ENST00000466379 SLC3A2P08195 630 aaKnown RBP15.73■□□□□ 0.11
UBE4B-206ENST00000466379 PCP11498 1178 aaKnown RBP15.73■□□□□ 0.11
UBE4B-206ENST00000466379 GTF2IP78347 998 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 TRIM29Q14134 588 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 STK38Q15208 465 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 TMED8Q6PL24 325 aaPredicted RBP15.73■□□□□ 0.11
UBE4B-206ENST00000466379 LINC00301Q8NCQ3 95 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 FLAD1Q8NFF5 587 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 CLSTN2Q9H4D0 955 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 ANO8Q9HCE9 1232 aaPredicted RBP15.73■□□□□ 0.11
UBE4B-206ENST00000466379 DDX19AQ9NUU7 478 aaKnown RBP15.73■□□□□ 0.11
UBE4B-206ENST00000466379 PCDHA7Q9UN72 937 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 KCNJ14Q9UNX9 436 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 LDHCP07864 332 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 C12orf60Q5U649 245 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 POTEAQ6S8J7 498 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 TRIM22Q8IYM9 498 aa15.73■□□□□ 0.11
UBE4B-206ENST00000466379 ZNF622Q969S3 477 aaKnown RBP eCLIP15.73■□□□□ 0.11
UBE4B-206ENST00000466379 hCG_1642624A0A1W2PR95 340 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 TSPY2A6NKD2 308 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 PLEKHA8P1O95397 391 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 PPP4CP60510 307 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 PDE4BQ07343 736 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 DOK7Q18PE1 504 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 TMC4Q7Z404 712 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 CATIPQ7Z7H3 387 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 MPNDQ8N594 471 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 FSIP1Q8NA03 581 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 MXD3Q9BW11 206 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 CDK5RAP2Q96SN8 1893 aa15.72■□□□□ 0.11
UBE4B-206ENST00000466379 CCDC196A0A1B0GTZ2 297 aa15.71■□□□□ 0.11
UBE4B-206ENST00000466379 PDE6BP35913 854 aa15.71■□□□□ 0.11
UBE4B-206ENST00000466379 PLCD1P51178 756 aa15.71■□□□□ 0.11
UBE4B-206ENST00000466379 SF3A1Q15459 793 aaKnown RBP15.71■□□□□ 0.11
UBE4B-206ENST00000466379 EZH2Q15910 746 aaKnown RBP15.71■□□□□ 0.11
UBE4B-206ENST00000466379 SLC44A5Q8NCS7 719 aa15.71■□□□□ 0.11
UBE4B-206ENST00000466379 TRIM44Q96DX7 344 aaPredicted RBP15.71■□□□□ 0.11
UBE4B-206ENST00000466379 F8W031 263 aaPredicted RBP15.71■□□□□ 0.11
UBE4B-206ENST00000466379 RCAN1P53805 252 aa15.71■□□□□ 0.11
UBE4B-206ENST00000466379 EN1Q05925 392 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms