RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 BIN2Q9UBW5 565 aaPredicted RBP4.54□□□□□ -1.68
CCDC93-205ENST00000466171 U3KQE9 123 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 BUD31P41223 144 aaPredicted RBP4.53□□□□□ -1.68
CCDC93-205ENST00000466171 PLCB3Q01970 1234 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 ZNF252P-AS1Q0IIN9 211 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.53□□□□□ -1.68
CCDC93-205ENST00000466171 PPM1JQ5JR12 505 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 STK35Q8TDR2 534 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 ELMO3Q96BJ8 720 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 CCDC120Q96HB5 630 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 HEXIM2Q96MH2 286 aaKnown RBP4.53□□□□□ -1.68
CCDC93-205ENST00000466171 TOX2Q96NM4 488 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 NECAB3Q96P71 396 aaPredicted RBP4.53□□□□□ -1.68
CCDC93-205ENST00000466171 SRCIN1Q9C0H9 1055 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 PRDM5Q9NQX1 630 aaPredicted RBP4.53□□□□□ -1.68
CCDC93-205ENST00000466171 LMCD1Q9NZU5 365 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 DCTN4Q9UJW0 460 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 CSADQ9Y600 493 aa4.53□□□□□ -1.68
CCDC93-205ENST00000466171 PNMA6FA0A0J9YX94 578 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 DCDC2CA8MYV0 355 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 FAM155AB1AL88 458 aaPredicted RBP4.52□□□□□ -1.69
CCDC93-205ENST00000466171 RAP1GAPP47736 663 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 SCARA3Q6AZY7 606 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 LLGL2Q6P1M3 1020 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 PI16Q6UXB8 463 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 TPTE2Q6XPS3 522 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 TMC7Q7Z402 723 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 C14orf37Q86TY3 774 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 SPACA3Q8IXA5 215 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 ZSCAN18Q8TBC5 510 aaPredicted RBP4.52□□□□□ -1.69
CCDC93-205ENST00000466171 ZNF507Q8TCN5 953 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 PRDM7Q9NQW5 492 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 PPM1HQ9ULR3 514 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 PCDHA4Q9UN74 947 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 MAPK8IP1Q9UQF2 711 aa4.52□□□□□ -1.69
CCDC93-205ENST00000466171 SOWAHDA6NJG2 315 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 LRIG2O94898 1065 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 GLI1P08151 1106 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 MESP2Q0VG99 397 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 LILRA6Q6PI73 481 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 MPZL3Q6UWV2 235 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 CYFIP1Q7L576 1253 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 FAM214BQ7L5A3 538 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 C12orf40Q86WS4 652 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 FBF1Q8TES7 1133 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 KIRREL1Q96J84 757 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 CACNA2D2Q9NY47 1150 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 TPX2Q9ULW0 747 aaKnown RBP4.51□□□□□ -1.69
CCDC93-205ENST00000466171 CTNND2Q9UQB3 1225 aa4.51□□□□□ -1.69
CCDC93-205ENST00000466171 PITPNM2Q9BZ72 1349 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 B8ZZF3 427 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 GIPC1O14908 333 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 MAPK1P28482 360 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 ENOX2Q16206 610 aaKnown RBP4.5□□□□□ -1.69
CCDC93-205ENST00000466171 NKPD1Q17RQ9 610 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 TMEM67Q5HYA8 995 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 SFRP5Q5T4F7 317 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 ZBTB37Q5TC79 503 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 ZNF746Q6NUN9 644 aaPredicted RBP4.5□□□□□ -1.69
CCDC93-205ENST00000466171 ARMCX6Q7L4S7 300 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 NPAS4Q8IUM7 802 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 CYP8B1Q9UNU6 501 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 JAG2Q9Y219 1238 aa4.5□□□□□ -1.69
CCDC93-205ENST00000466171 ZNF503-AS2A6NEH8 195 aa4.49□□□□□ -1.69
CCDC93-205ENST00000466171 TSPAN15O95858 294 aa4.49□□□□□ -1.69
CCDC93-205ENST00000466171 EOMESO95936 686 aa4.49□□□□□ -1.69
CCDC93-205ENST00000466171 BMP6P22004 513 aa4.49□□□□□ -1.69
CCDC93-205ENST00000466171 ATP2B2Q01814 1243 aa4.49□□□□□ -1.69
CCDC93-205ENST00000466171 RING1Q06587 406 aa4.49□□□□□ -1.69
CCDC93-205ENST00000466171 ANKLE2Q86XL3 938 aa4.49□□□□□ -1.69
CCDC93-205ENST00000466171 ZSCAN29Q8IWY8 852 aaPredicted RBP4.49□□□□□ -1.69
CCDC93-205ENST00000466171 C3orf58Q8NDZ4 430 aa4.49□□□□□ -1.69
CCDC93-205ENST00000466171 GRIN3AQ8TCU5 1115 aa4.49□□□□□ -1.69
CCDC93-205ENST00000466171 CARS2Q9HA77 564 aaKnown RBP4.49□□□□□ -1.69
CCDC93-205ENST00000466171 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.49□□□□□ -1.69
CCDC93-205ENST00000466171 NFIBO00712 420 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 ENC1O14682 589 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 TREHO43280 583 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 RAC2P15153 192 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 CYP7A1P22680 504 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 NTF4P34130 210 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 MAPK8P45983 427 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 DSC3Q14574 896 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 CDKAL1Q5VV42 579 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 ALG1LQ6GMV1 187 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 MPRIPQ6WCQ1 1025 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 SYDE1Q6ZW31 735 aaPredicted RBP4.48□□□□□ -1.69
CCDC93-205ENST00000466171 HDXQ7Z353 690 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 CILP2Q8IUL8 1156 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 MFSD4AQ8N468 514 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 MFSD2AQ8NA29 543 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 RETREG2Q8NC44 543 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 ANKRD24Q8TF21 1146 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 LIN37Q96GY3 246 aaPredicted RBP4.48□□□□□ -1.69
CCDC93-205ENST00000466171 HSPA12BQ96MM6 686 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 MIPEPQ99797 713 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 SPG7Q9UQ90 795 aa4.48□□□□□ -1.69
CCDC93-205ENST00000466171 PRAMEF27A3QJZ7 478 aa4.47□□□□□ -1.69
CCDC93-205ENST00000466171 LMNB1P20700 586 aa4.47□□□□□ -1.69
CCDC93-205ENST00000466171 GDNFP39905 211 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms