RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CELF1Q92879 486 aaKnown RBP18.82■□□□□ 0.6
SLX4-202ENST00000466154 ZNF652Q9Y2D9 606 aa18.82■□□□□ 0.6
SLX4-202ENST00000466154 PCDHA5Q9Y5H7 936 aa18.82■□□□□ 0.6
SLX4-202ENST00000466154 FANCCQ00597 558 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 KRI1Q8N9T8 703 aaKnown RBP18.81■□□□□ 0.6
SLX4-202ENST00000466154 SMTNL1A8MU46 457 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 GNAT2P19087 354 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 PDCL2Q8N4E4 241 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 SLIT2O94813 1529 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 MMP1P03956 469 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 UBASH3AP57075 661 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 ALX1Q15699 326 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 PTF1AQ7RTS3 328 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 TRMT44Q8IYL2 757 aaKnown RBP18.81■□□□□ 0.6
SLX4-202ENST00000466154 WASF1Q92558 559 aa18.81■□□□□ 0.6
SLX4-202ENST00000466154 RNF41Q9H4P4 317 aaPredicted RBP18.81■□□□□ 0.6
SLX4-202ENST00000466154 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
SLX4-202ENST00000466154 IFNAR1P17181 557 aa18.8■□□□□ 0.6
SLX4-202ENST00000466154 CCZ1BP86790 482 aa18.8■□□□□ 0.6
SLX4-202ENST00000466154 CCZ1P86791 482 aaPredicted RBP18.8■□□□□ 0.6
SLX4-202ENST00000466154 FAM47AQ5JRC9 791 aa18.8■□□□□ 0.6
SLX4-202ENST00000466154 FAM177A1Q8N128 213 aaPredicted RBP18.8■□□□□ 0.6
SLX4-202ENST00000466154 ESR2Q92731 530 aa18.8■□□□□ 0.6
SLX4-202ENST00000466154 DPF2Q92785 391 aa18.8■□□□□ 0.6
SLX4-202ENST00000466154 SRP68Q9UHB9 627 aaKnown RBP18.8■□□□□ 0.6
SLX4-202ENST00000466154 NUP98P52948 1817 aa18.8■□□□□ 0.6
SLX4-202ENST00000466154 LRP6O75581 1613 aa18.8■□□□□ 0.6
SLX4-202ENST00000466154 NMT2O60551 498 aa18.8■□□□□ 0.6
SLX4-202ENST00000466154 CDK11BP21127 795 aaKnown RBP18.8■□□□□ 0.6
SLX4-202ENST00000466154 IFIT1BQ5T764 474 aaKnown RBP18.8■□□□□ 0.6
SLX4-202ENST00000466154 USP49Q70CQ1 688 aa18.8■□□□□ 0.6
SLX4-202ENST00000466154 METTL16Q86W50 562 aaKnown RBP18.8■□□□□ 0.6
SLX4-202ENST00000466154 STAG1Q8WVM7 1258 aa18.8■□□□□ 0.6
SLX4-202ENST00000466154 V9GY48 417 aaPredicted RBP18.8■□□□□ 0.6
SLX4-202ENST00000466154 U2AF2P26368 475 aaKnown RBP eCLIP18.79■□□□□ 0.6
SLX4-202ENST00000466154 CREBRFQ8IUR6 639 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 FANCLQ9NW38 375 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 SERTAD1Q9UHV2 236 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 DISP2A7MBM2 1401 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 SPATA31A1Q5TZJ5 1347 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 ABCA3Q99758 1704 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 AFMP43652 599 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 KLHL10Q6JEL2 608 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 HOMER1Q86YM7 354 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 CRACR2BQ8N4Y2 399 aaPredicted RBP18.79■□□□□ 0.6
SLX4-202ENST00000466154 ATRNO75882 1429 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 BAZ2BQ9UIF8 2168 aaKnown RBP18.79■□□□□ 0.6
SLX4-202ENST00000466154 USP17L12C9JPN9 530 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 USP17L21D6R901 530 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 PPP6R2O75170 966 aa18.79■□□□□ 0.6
SLX4-202ENST00000466154 TOB1P50616 345 aaPredicted RBP18.79■□□□□ 0.6
SLX4-202ENST00000466154 RBM6P78332 1123 aaKnown RBP18.79■□□□□ 0.6
SLX4-202ENST00000466154 FOXP4Q8IVH2 680 aaPredicted RBP18.79■□□□□ 0.6
SLX4-202ENST00000466154 CUTAO60888 179 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 PLEKHA8P1O95397 391 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 RESP18Q5W5W9 173 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 KRBA2Q6ZNG9 492 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 TMX1Q9H3N1 280 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 MYH7P12883 1935 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 STRCQ7RTU9 1775 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 CCDC196A0A1B0GTZ2 297 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 DEXIO95424 95 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 PRR29P0C7W0 189 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 CASP1P29466 404 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 NCAPHQ15003 741 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 ARMCX5Q6P1M9 558 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 STAMQ92783 540 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 DNAJC5Q9H3Z4 198 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 MTERF4Q7Z6M4 381 aaKnown RBP18.78■□□□□ 0.6
SLX4-202ENST00000466154 SLC51AQ86UW1 340 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 DHX58Q96C10 678 aa18.78■□□□□ 0.6
SLX4-202ENST00000466154 TMEM232C9JQI7 657 aa18.77■□□□□ 0.6
SLX4-202ENST00000466154 NEMFO60524 1076 aa18.77■□□□□ 0.6
SLX4-202ENST00000466154 MYL5Q02045 173 aa18.77■□□□□ 0.6
SLX4-202ENST00000466154 TBC1D9BQ66K14 1250 aa18.77■□□□□ 0.6
SLX4-202ENST00000466154 LINC00116Q8NCU8 138 aa18.77■□□□□ 0.6
SLX4-202ENST00000466154 AK7Q96M32 723 aa18.77■□□□□ 0.6
SLX4-202ENST00000466154 MINPP1Q9UNW1 487 aa18.77■□□□□ 0.6
SLX4-202ENST00000466154 GTF2F1P35269 517 aaKnown RBP eCLIP18.77■□□□□ 0.59
SLX4-202ENST00000466154 GSDMDP57764 484 aa18.77■□□□□ 0.59
SLX4-202ENST00000466154 PDE4BQ07343 736 aa18.77■□□□□ 0.59
SLX4-202ENST00000466154 NRDCO43847 1150 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 CATIPQ7Z7H3 387 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 NBPF5PQ86XG9 351 aaPredicted RBP18.76■□□□□ 0.59
SLX4-202ENST00000466154 CCAR2Q8N163 923 aaKnown RBP18.76■□□□□ 0.59
SLX4-202ENST00000466154 ENAHQ8N8S7 591 aaPredicted RBP18.76■□□□□ 0.59
SLX4-202ENST00000466154 COBLO75128 1261 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 NOM1Q5C9Z4 860 aaKnown RBP18.76■□□□□ 0.59
SLX4-202ENST00000466154 IQCA1Q86XH1 822 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 C8orf37Q96NL8 207 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 HPSEQ9Y251 543 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 MYH15Q9Y2K3 1946 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 MYH3P11055 1940 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 CYP2D6P10635 497 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 ZNF174Q15697 407 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 CSRNP2Q9H175 543 aa18.76■□□□□ 0.59
SLX4-202ENST00000466154 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.75■□□□□ 0.59
SLX4-202ENST00000466154 PRDX5P30044 214 aa18.75■□□□□ 0.59
SLX4-202ENST00000466154 STX17P56962 302 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms