RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CCDC120Q96HB5 630 aa7.74□□□□□ -1.17
LRCH3-211ENST00000466054 NPHS2Q9NP85 383 aa7.74□□□□□ -1.17
LRCH3-211ENST00000466054 PRDM10Q9NQV6 1147 aa7.74□□□□□ -1.17
LRCH3-211ENST00000466054 GPN3Q9UHW5 284 aaPredicted RBP7.74□□□□□ -1.17
LRCH3-211ENST00000466054 PCDHGC5Q9Y5F6 944 aa7.74□□□□□ -1.17
LRCH3-211ENST00000466054 PITPNM2Q9BZ72 1349 aa7.74□□□□□ -1.17
LRCH3-211ENST00000466054 FAM155AB1AL88 458 aaPredicted RBP7.73□□□□□ -1.17
LRCH3-211ENST00000466054 RNF214Q8ND24 703 aa7.73□□□□□ -1.17
LRCH3-211ENST00000466054 ACSBG1Q96GR2 724 aa7.73□□□□□ -1.17
LRCH3-211ENST00000466054 KRTAP9-3Q9BYQ3 159 aa7.73□□□□□ -1.17
LRCH3-211ENST00000466054 BRPF3Q9ULD4 1205 aa7.73□□□□□ -1.17
LRCH3-211ENST00000466054 TRAK1Q9UPV9 953 aa7.73□□□□□ -1.17
LRCH3-211ENST00000466054 CPNE3O75131 537 aaKnown RBP7.72□□□□□ -1.17
LRCH3-211ENST00000466054 KRT1P04264 644 aa7.72□□□□□ -1.17
LRCH3-211ENST00000466054 RAC2P15153 192 aa7.72□□□□□ -1.17
LRCH3-211ENST00000466054 GDNFP39905 211 aa7.72□□□□□ -1.17
LRCH3-211ENST00000466054 SERPINB4P48594 390 aa7.72□□□□□ -1.17
LRCH3-211ENST00000466054 NKPD1Q17RQ9 610 aa7.72□□□□□ -1.17
LRCH3-211ENST00000466054 KRTAP5-3Q6L8H2 238 aa7.72□□□□□ -1.17
LRCH3-211ENST00000466054 FOXQ1Q9C009 403 aa7.72□□□□□ -1.17
LRCH3-211ENST00000466054 ABCB6Q9NP58 842 aa7.72□□□□□ -1.17
LRCH3-211ENST00000466054 PRDM5Q9NQX1 630 aaPredicted RBP7.72□□□□□ -1.17
LRCH3-211ENST00000466054 TMEM238LA0A1B0GVL6 79 aa7.71□□□□□ -1.18
LRCH3-211ENST00000466054 ERVK-24P63145 666 aa7.71□□□□□ -1.18
LRCH3-211ENST00000466054 TRIM26Q12899 539 aaPredicted RBP7.71□□□□□ -1.18
LRCH3-211ENST00000466054 ANO2Q9NQ90 1003 aa7.71□□□□□ -1.18
LRCH3-211ENST00000466054 SOWAHDA6NJG2 315 aa7.7□□□□□ -1.18
LRCH3-211ENST00000466054 ICMTO60725 284 aa7.7□□□□□ -1.18
LRCH3-211ENST00000466054 FAAP100Q0VG06 881 aa7.7□□□□□ -1.18
LRCH3-211ENST00000466054 DTHD1Q6ZMT9 781 aa7.7□□□□□ -1.18
LRCH3-211ENST00000466054 NPAS4Q8IUM7 802 aa7.7□□□□□ -1.18
LRCH3-211ENST00000466054 RELTQ969Z4 430 aa7.7□□□□□ -1.18
LRCH3-211ENST00000466054 CD320Q9NPF0 282 aa7.7□□□□□ -1.18
LRCH3-211ENST00000466054 TMEM39AQ9NV64 488 aa7.7□□□□□ -1.18
LRCH3-211ENST00000466054 ZNF211Q13398 564 aaPredicted RBP7.69□□□□□ -1.18
LRCH3-211ENST00000466054 PRPF40BQ6NWY9 871 aaKnown RBP7.69□□□□□ -1.18
LRCH3-211ENST00000466054 CDC37L1Q7L3B6 337 aa7.69□□□□□ -1.18
LRCH3-211ENST00000466054 KCNN1Q92952 543 aa7.69□□□□□ -1.18
LRCH3-211ENST00000466054 ATP13A1Q9HD20 1204 aa7.69□□□□□ -1.18
LRCH3-211ENST00000466054 HOXA5P20719 270 aa7.68□□□□□ -1.18
LRCH3-211ENST00000466054 ZC3H12AQ5D1E8 599 aaKnown RBP7.68□□□□□ -1.18
LRCH3-211ENST00000466054 MAP1SQ66K74 1059 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-211ENST00000466054 FAM214BQ7L5A3 538 aa7.68□□□□□ -1.18
LRCH3-211ENST00000466054 GLYCTKQ8IVS8 523 aa7.68□□□□□ -1.18
LRCH3-211ENST00000466054 ABHD4Q8TB40 342 aa7.68□□□□□ -1.18
LRCH3-211ENST00000466054 GZF1Q9H116 711 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-211ENST00000466054 PPP4R2Q9NY27 417 aa7.68□□□□□ -1.18
LRCH3-211ENST00000466054 SMG5Q9UPR3 1016 aaKnown RBP7.68□□□□□ -1.18
LRCH3-211ENST00000466054 H3BRB1 525 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 ETV2O00321 342 aaPredicted RBP7.67□□□□□ -1.18
LRCH3-211ENST00000466054 GLDCP23378 1020 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 LINC00310P59036 64 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 PDE3BQ13370 1112 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 CDKAL1Q5VV42 579 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 SND1Q7KZF4 910 aaKnown RBP eCLIP7.67□□□□□ -1.18
LRCH3-211ENST00000466054 SULF2Q8IWU5 870 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 HSPA12BQ96MM6 686 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 SLC26A8Q96RN1 970 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 IRF2BPLQ9H1B7 796 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 ZCCHC4Q9H5U6 513 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 TUT1Q9H6E5 874 aaKnown RBP7.67□□□□□ -1.18
LRCH3-211ENST00000466054 KCNK12Q9HB15 430 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 MAPK8IP1Q9UQF2 711 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 JAG2Q9Y219 1238 aa7.67□□□□□ -1.18
LRCH3-211ENST00000466054 ORC1Q13415 861 aa7.66□□□□□ -1.18
LRCH3-211ENST00000466054 CSRNP1Q96S65 589 aa7.66□□□□□ -1.18
LRCH3-211ENST00000466054 CBX8Q9HC52 389 aa7.66□□□□□ -1.18
LRCH3-211ENST00000466054 TPX2Q9ULW0 747 aaKnown RBP7.66□□□□□ -1.18
LRCH3-211ENST00000466054 CSADQ9Y600 493 aa7.66□□□□□ -1.18
LRCH3-211ENST00000466054 NDUFB5O43674 189 aa7.65□□□□□ -1.18
LRCH3-211ENST00000466054 MED14OSP0DP75 135 aa7.65□□□□□ -1.18
LRCH3-211ENST00000466054 PPM1JQ5JR12 505 aa7.65□□□□□ -1.18
LRCH3-211ENST00000466054 CCDC74AQ96AQ1 378 aa7.65□□□□□ -1.18
LRCH3-211ENST00000466054 EMILIN2Q9BXX0 1053 aa7.65□□□□□ -1.18
LRCH3-211ENST00000466054 C19orf73Q9NVV2 129 aa7.65□□□□□ -1.18
LRCH3-211ENST00000466054 H3BS24 57 aa7.64□□□□□ -1.19
LRCH3-211ENST00000466054 FCGRTP55899 365 aa7.64□□□□□ -1.19
LRCH3-211ENST00000466054 TTC6Q86TZ1 520 aa7.64□□□□□ -1.19
LRCH3-211ENST00000466054 PDZD3Q86UT5 571 aa7.64□□□□□ -1.19
LRCH3-211ENST00000466054 MFSD4AQ8N468 514 aa7.64□□□□□ -1.19
LRCH3-211ENST00000466054 ALPK1Q96QP1 1244 aa7.64□□□□□ -1.19
LRCH3-211ENST00000466054 PARD6AQ9NPB6 346 aa7.64□□□□□ -1.19
LRCH3-211ENST00000466054 SLAMF8Q9P0V8 285 aa7.64□□□□□ -1.19
LRCH3-211ENST00000466054 BMP7P18075 431 aa7.63□□□□□ -1.19
LRCH3-211ENST00000466054 ARNTP27540 789 aa7.63□□□□□ -1.19
LRCH3-211ENST00000466054 DBX2Q6ZNG2 339 aa7.63□□□□□ -1.19
LRCH3-211ENST00000466054 KCT2Q8NC54 265 aa7.63□□□□□ -1.19
LRCH3-211ENST00000466054 TMC1Q8TDI8 760 aa7.63□□□□□ -1.19
LRCH3-211ENST00000466054 GPBAR1Q8TDU6 330 aa7.63□□□□□ -1.19
LRCH3-211ENST00000466054 BIN2Q9UBW5 565 aaPredicted RBP7.63□□□□□ -1.19
LRCH3-211ENST00000466054 EOMESO95936 686 aa7.62□□□□□ -1.19
LRCH3-211ENST00000466054 ARHGAP4P98171 946 aa7.62□□□□□ -1.19
LRCH3-211ENST00000466054 GRM2Q14416 872 aa7.62□□□□□ -1.19
LRCH3-211ENST00000466054 TMCO4Q5TGY1 634 aa7.62□□□□□ -1.19
LRCH3-211ENST00000466054 MYLIPQ8WY64 445 aa7.62□□□□□ -1.19
LRCH3-211ENST00000466054 C20orf173Q96LM9 149 aa7.62□□□□□ -1.19
LRCH3-211ENST00000466054 SFRP5Q5T4F7 317 aa7.61□□□□□ -1.19
LRCH3-211ENST00000466054 ARMCX6Q7L4S7 300 aa7.61□□□□□ -1.19
LRCH3-211ENST00000466054 DNAJC25Q9H1X3 360 aa7.61□□□□□ -1.19
LRCH3-211ENST00000466054 SEMA3GQ9NS98 782 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms