RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
DDR1-242ENST00000465966 DIS3LQ8TF46 1054 aaKnown RBP10.58□□□□□ -0.72
DDR1-242ENST00000465966 C11orf49Q9H6J7 331 aa10.58□□□□□ -0.72
DDR1-242ENST00000465966 FBXO3Q9UK99 471 aa10.58□□□□□ -0.72
DDR1-242ENST00000465966 ZMYND8Q9ULU4 1186 aaPredicted RBP10.58□□□□□ -0.72
DDR1-242ENST00000465966 STXBP5LQ9Y2K9 1186 aa10.58□□□□□ -0.72
DDR1-242ENST00000465966 ZSWIM8A7E2V4 1837 aa10.58□□□□□ -0.72
DDR1-242ENST00000465966 CEP290O15078 2479 aa10.57□□□□□ -0.72
DDR1-242ENST00000465966 ATRNL1Q5VV63 1379 aa10.57□□□□□ -0.72
DDR1-242ENST00000465966 PICALMQ13492 652 aa10.57□□□□□ -0.72
DDR1-242ENST00000465966 AAMPQ13685 434 aa10.57□□□□□ -0.72
DDR1-242ENST00000465966 SPTY2D1Q68D10 685 aaPredicted RBP10.57□□□□□ -0.72
DDR1-242ENST00000465966 TDHQ8IZJ6 230 aa10.57□□□□□ -0.72
DDR1-242ENST00000465966 TBC1D2Q9BYX2 928 aa10.57□□□□□ -0.72
DDR1-242ENST00000465966 UBE2OQ9C0C9 1292 aaKnown RBP10.57□□□□□ -0.72
DDR1-242ENST00000465966 USP44Q9H0E7 712 aa10.57□□□□□ -0.72
DDR1-242ENST00000465966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.57□□□□□ -0.72
DDR1-242ENST00000465966 ZBTB40Q9NUA8 1239 aa10.57□□□□□ -0.72
DDR1-242ENST00000465966 PCDHB15Q9Y5E8 787 aa10.57□□□□□ -0.72
DDR1-242ENST00000465966 DDTLA6NHG4 134 aaPredicted RBP10.56□□□□□ -0.72
DDR1-242ENST00000465966 TBC1D12O60347 775 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 CIAO1O76071 339 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 SYN1P17600 705 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 MAGEA10P43363 369 aaPredicted RBP10.56□□□□□ -0.72
DDR1-242ENST00000465966 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
DDR1-242ENST00000465966 TREML2Q5T2D2 321 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 SH3BP5LQ7L8J4 393 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 ATG9AQ7Z3C6 839 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 ZNF280CQ8ND82 737 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 FAM163AQ96GL9 167 aaPredicted RBP10.56□□□□□ -0.72
DDR1-242ENST00000465966 OSBPL5Q9H0X9 879 aaPredicted RBP10.56□□□□□ -0.72
DDR1-242ENST00000465966 SIL1Q9H173 461 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 ABCF2Q9UG63 623 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 HDAC5Q9UQL6 1122 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 GAKO14976 1311 aa10.56□□□□□ -0.72
DDR1-242ENST00000465966 SZT2Q5T011 3432 aa10.55□□□□□ -0.72
DDR1-242ENST00000465966 IL15P40933 162 aaPredicted RBP10.55□□□□□ -0.72
DDR1-242ENST00000465966 BTDP43251 543 aa10.55□□□□□ -0.72
DDR1-242ENST00000465966 SPP2Q13103 211 aa10.55□□□□□ -0.72
DDR1-242ENST00000465966 Q7L0L9 218 aa10.55□□□□□ -0.72
DDR1-242ENST00000465966 C1orf115Q9H7X2 142 aa10.55□□□□□ -0.72
DDR1-242ENST00000465966 AS3MTQ9HBK9 375 aa10.55□□□□□ -0.72
DDR1-242ENST00000465966 MTMR10Q9NXD2 777 aa10.55□□□□□ -0.72
DDR1-242ENST00000465966 ZBTB22O15209 634 aa10.54□□□□□ -0.72
DDR1-242ENST00000465966 NPM3O75607 178 aaKnown RBP10.54□□□□□ -0.72
DDR1-242ENST00000465966 MAP4K4O95819 1239 aaPredicted RBP10.54□□□□□ -0.72
DDR1-242ENST00000465966 IGHDP01880 384 aa10.54□□□□□ -0.72
DDR1-242ENST00000465966 PHKA1P46020 1223 aa10.54□□□□□ -0.72
DDR1-242ENST00000465966 HMGCS2P54868 508 aa10.54□□□□□ -0.72
DDR1-242ENST00000465966 IRX3P78415 501 aaPredicted RBP10.54□□□□□ -0.72
DDR1-242ENST00000465966 CCDC102BQ68D86 513 aa10.54□□□□□ -0.72
DDR1-242ENST00000465966 CENPQQ7L2Z9 268 aaPredicted RBP10.54□□□□□ -0.72
DDR1-242ENST00000465966 CCDC84Q86UT8 332 aaPredicted RBP10.54□□□□□ -0.72
DDR1-242ENST00000465966 CCAR1Q8IX12 1150 aaKnown RBP10.54□□□□□ -0.72
DDR1-242ENST00000465966 TRMT44Q8IYL2 757 aaKnown RBP10.54□□□□□ -0.72
DDR1-242ENST00000465966 MEIS3Q99687 375 aa10.54□□□□□ -0.72
DDR1-242ENST00000465966 ASCC2Q9H1I8 757 aaPredicted RBP10.54□□□□□ -0.72
DDR1-242ENST00000465966 DDX4Q9NQI0 724 aaKnown RBP10.54□□□□□ -0.72
DDR1-242ENST00000465966 GJD2Q9UKL4 321 aa10.54□□□□□ -0.72
DDR1-242ENST00000465966 OGDHLQ9ULD0 1010 aa10.54□□□□□ -0.72
DDR1-242ENST00000465966 GPR75-ASB3A0A0A6YYF3 556 aa10.53□□□□□ -0.72
DDR1-242ENST00000465966 USP17L5A8MUK1 530 aa10.53□□□□□ -0.72
DDR1-242ENST00000465966 LDHCP07864 332 aa10.53□□□□□ -0.72
DDR1-242ENST00000465966 UBTFL1P0CB47 393 aaPredicted RBP10.53□□□□□ -0.72
DDR1-242ENST00000465966 XRCC5P13010 732 aaKnown RBP10.53□□□□□ -0.72
DDR1-242ENST00000465966 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
DDR1-242ENST00000465966 CYP2B6P20813 491 aa10.53□□□□□ -0.72
DDR1-242ENST00000465966 GSTO1P78417 241 aa10.53□□□□□ -0.72
DDR1-242ENST00000465966 ERICH6Q7L0X2 663 aa10.53□□□□□ -0.72
DDR1-242ENST00000465966 SOCS4Q8WXH5 440 aa10.53□□□□□ -0.72
DDR1-242ENST00000465966 NUDT12Q9BQG2 462 aa10.53□□□□□ -0.72
DDR1-242ENST00000465966 TMOD4Q9NZQ9 345 aa10.53□□□□□ -0.72
DDR1-242ENST00000465966 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.53□□□□□ -0.72
DDR1-242ENST00000465966 RANBP2P49792 3224 aaKnown RBP10.53□□□□□ -0.72
DDR1-242ENST00000465966 MROH7-TTC4A0A0A0MT08 1334 aa10.53□□□□□ -0.72
DDR1-242ENST00000465966 PDS5AQ29RF7 1337 aaKnown RBP10.53□□□□□ -0.72
DDR1-242ENST00000465966 RFX7Q2KHR2 1363 aa10.52□□□□□ -0.72
DDR1-242ENST00000465966 SLURP2P0DP57 97 aa10.52□□□□□ -0.73
DDR1-242ENST00000465966 ZKSCAN1P17029 563 aaPredicted RBP10.52□□□□□ -0.73
DDR1-242ENST00000465966 CAP2P40123 477 aa10.52□□□□□ -0.73
DDR1-242ENST00000465966 TRIM32Q13049 653 aa10.52□□□□□ -0.73
DDR1-242ENST00000465966 RASGRF1Q13972 1273 aa10.52□□□□□ -0.73
DDR1-242ENST00000465966 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
DDR1-242ENST00000465966 GPRC5AQ8NFJ5 357 aa10.52□□□□□ -0.73
DDR1-242ENST00000465966 TRIB2Q92519 343 aa10.52□□□□□ -0.73
DDR1-242ENST00000465966 CHMP4BQ9H444 224 aaKnown RBP10.52□□□□□ -0.73
DDR1-242ENST00000465966 MORF4L1Q9UBU8 362 aa10.52□□□□□ -0.73
DDR1-242ENST00000465966 AKAP2Q9Y2D5 859 aa10.52□□□□□ -0.73
DDR1-242ENST00000465966 FAM196BA6NMK8 535 aa10.51□□□□□ -0.73
DDR1-242ENST00000465966 ADORA1P30542 326 aa10.51□□□□□ -0.73
DDR1-242ENST00000465966 MAPK4P31152 587 aa10.51□□□□□ -0.73
DDR1-242ENST00000465966 MECOMQ03112 1051 aa10.51□□□□□ -0.73
DDR1-242ENST00000465966 MAP3K21Q5TCX8 1036 aa10.51□□□□□ -0.73
DDR1-242ENST00000465966 SKAP1Q86WV1 359 aa10.51□□□□□ -0.73
DDR1-242ENST00000465966 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.51□□□□□ -0.73
DDR1-242ENST00000465966 GTF3C2Q8WUA4 911 aaPredicted RBP10.51□□□□□ -0.73
DDR1-242ENST00000465966 LBHD1Q9BQE6 289 aaPredicted RBP10.51□□□□□ -0.73
DDR1-242ENST00000465966 NOL10Q9BSC4 688 aaKnown RBP10.51□□□□□ -0.73
DDR1-242ENST00000465966 COL25A1Q9BXS0 654 aaPredicted RBP10.51□□□□□ -0.73
DDR1-242ENST00000465966 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms