RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 ANTXR2P58335 489 aa25.61■■□□□ 1.69
ITGA4-204ENST00000465522 CYB5R4Q7L1T6 521 aa25.61■■□□□ 1.69
ITGA4-204ENST00000465522 MICALL2Q8IY33 904 aa25.61■■□□□ 1.69
ITGA4-204ENST00000465522 MYO1BO43795 1136 aa25.6■■□□□ 1.69
ITGA4-204ENST00000465522 PRDM1O75626 825 aa25.6■■□□□ 1.69
ITGA4-204ENST00000465522 TCP10Q12799 353 aa25.6■■□□□ 1.69
ITGA4-204ENST00000465522 NKX2-3Q8TAU0 364 aa25.6■■□□□ 1.69
ITGA4-204ENST00000465522 BRF1Q92994 677 aa25.6■■□□□ 1.69
ITGA4-204ENST00000465522 DYNLL2Q96FJ2 89 aa25.6■■□□□ 1.69
ITGA4-204ENST00000465522 ZSCAN31Q96LW9 406 aaPredicted RBP25.6■■□□□ 1.69
ITGA4-204ENST00000465522 ZNF70Q9UC06 446 aaPredicted RBP25.6■■□□□ 1.69
ITGA4-204ENST00000465522 FAM198AQ9UFP1 575 aa25.6■■□□□ 1.69
ITGA4-204ENST00000465522 WNT10BO00744 389 aa25.6■■□□□ 1.69
ITGA4-204ENST00000465522 ORC4O43929 436 aa25.6■■□□□ 1.69
ITGA4-204ENST00000465522 RBM26Q5T8P6 1007 aaKnown RBP25.6■■□□□ 1.69
ITGA4-204ENST00000465522 FBXL16Q8N461 479 aa25.6■■□□□ 1.69
ITGA4-204ENST00000465522 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.6■■□□□ 1.69
ITGA4-204ENST00000465522 DDX60LQ5H9U9 1706 aaKnown RBP25.59■■□□□ 1.69
ITGA4-204ENST00000465522 ROBO3Q96MS0 1386 aa25.59■■□□□ 1.69
ITGA4-204ENST00000465522 CLRN2A0PK11 232 aa25.59■■□□□ 1.69
ITGA4-204ENST00000465522 RANBP6O60518 1105 aaKnown RBP25.59■■□□□ 1.69
ITGA4-204ENST00000465522 ZBED3Q96IU2 234 aaPredicted RBP25.59■■□□□ 1.69
ITGA4-204ENST00000465522 AGXT2Q9BYV1 514 aa25.59■■□□□ 1.69
ITGA4-204ENST00000465522 MKNK2Q9HBH9 465 aa25.59■■□□□ 1.69
ITGA4-204ENST00000465522 ZNF287Q9HBT7 754 aa25.59■■□□□ 1.69
ITGA4-204ENST00000465522 H7C1D1 291 aa25.58■■□□□ 1.69
ITGA4-204ENST00000465522 NBPF9Q3BBW0 867 aa25.58■■□□□ 1.69
ITGA4-204ENST00000465522 SPDYE2Q495Y8 402 aa25.58■■□□□ 1.69
ITGA4-204ENST00000465522 ZFPM1Q8IX07 1006 aa25.58■■□□□ 1.69
ITGA4-204ENST00000465522 TMEM87BQ96K49 555 aa25.58■■□□□ 1.69
ITGA4-204ENST00000465522 DHX36Q9H2U1 1008 aaKnown RBP25.58■■□□□ 1.69
ITGA4-204ENST00000465522 TPCN1Q9ULQ1 816 aa25.58■■□□□ 1.69
ITGA4-204ENST00000465522 ENTPD3O75355 529 aa25.57■■□□□ 1.68
ITGA4-204ENST00000465522 HLA-DOAP06340 250 aa25.57■■□□□ 1.68
ITGA4-204ENST00000465522 ZSCAN29Q8IWY8 852 aaPredicted RBP25.57■■□□□ 1.68
ITGA4-204ENST00000465522 C16orf86Q6ZW13 317 aa25.57■■□□□ 1.68
ITGA4-204ENST00000465522 SH2B1Q9NRF2 756 aaPredicted RBP25.57■■□□□ 1.68
ITGA4-204ENST00000465522 TCP10L2B9ZVM9 353 aa25.56■■□□□ 1.68
ITGA4-204ENST00000465522 SART3Q15020 963 aaKnown RBP25.56■■□□□ 1.68
ITGA4-204ENST00000465522 SAMD7Q7Z3H4 446 aa25.56■■□□□ 1.68
ITGA4-204ENST00000465522 VEZTQ9HBM0 779 aa25.56■■□□□ 1.68
ITGA4-204ENST00000465522 IFIT3O14879 490 aaKnown RBP25.55■■□□□ 1.68
ITGA4-204ENST00000465522 DDNO94850 711 aaPredicted RBP25.55■■□□□ 1.68
ITGA4-204ENST00000465522 CDK8P49336 464 aa25.55■■□□□ 1.68
ITGA4-204ENST00000465522 NT5C2P49902 561 aa25.55■■□□□ 1.68
ITGA4-204ENST00000465522 ME3Q16798 604 aa25.55■■□□□ 1.68
ITGA4-204ENST00000465522 TBC1D10BQ4KMP7 808 aaPredicted RBP25.55■■□□□ 1.68
ITGA4-204ENST00000465522 FKBP1CQ5VVH2 108 aa25.55■■□□□ 1.68
ITGA4-204ENST00000465522 ZNF444Q8N0Y2 327 aaPredicted RBP25.55■■□□□ 1.68
ITGA4-204ENST00000465522 IGDCC4Q8TDY8 1250 aa25.55■■□□□ 1.68
ITGA4-204ENST00000465522 GPHNQ9NQX3 736 aaPredicted RBP25.55■■□□□ 1.68
ITGA4-204ENST00000465522 FOXD4L1Q9NU39 408 aa25.55■■□□□ 1.68
ITGA4-204ENST00000465522 GPRC5DQ9NZD1 345 aa25.55■■□□□ 1.68
ITGA4-204ENST00000465522 ANGEL1Q9UNK9 670 aaKnown RBP25.55■■□□□ 1.68
ITGA4-204ENST00000465522 ERICH2A1L162 156 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 EGFRP00533 1210 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 APOBRQ0VD83 1088 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 SLC44A5Q8NCS7 719 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 ZKSCAN3Q9BRR0 538 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 UBAC1Q9BSL1 405 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 MTA3Q9BTC8 594 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 SERPINB13Q9UIV8 391 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 TSPY2A6NKD2 308 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 LARGE1O95461 756 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 CUL4AQ13619 759 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 TMEM67Q5HYA8 995 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 DPY19L2Q6NUT2 758 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 IQCA1Q86XH1 822 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 PI4KBQ9UBF8 816 aa25.54■■□□□ 1.68
ITGA4-204ENST00000465522 DDTLA6NHG4 134 aaPredicted RBP25.53■■□□□ 1.68
ITGA4-204ENST00000465522 SH2B2O14492 632 aaPredicted RBP25.53■■□□□ 1.68
ITGA4-204ENST00000465522 KIF4BQ2VIQ3 1234 aa25.53■■□□□ 1.68
ITGA4-204ENST00000465522 FAM47AQ5JRC9 791 aa25.53■■□□□ 1.68
ITGA4-204ENST00000465522 GABPAQ06546 454 aa25.52■■□□□ 1.68
ITGA4-204ENST00000465522 SH3BP5LQ7L8J4 393 aa25.52■■□□□ 1.68
ITGA4-204ENST00000465522 FAM151AQ8WW52 585 aa25.52■■□□□ 1.68
ITGA4-204ENST00000465522 NAP1L2Q9ULW6 460 aaPredicted RBP25.52■■□□□ 1.68
ITGA4-204ENST00000465522 LIFRP42702 1097 aa25.51■■□□□ 1.68
ITGA4-204ENST00000465522 TFAP4Q01664 338 aa25.51■■□□□ 1.68
ITGA4-204ENST00000465522 ZNF274Q96GC6 653 aaPredicted RBP25.51■■□□□ 1.68
ITGA4-204ENST00000465522 EHD4Q9H223 541 aa25.51■■□□□ 1.68
ITGA4-204ENST00000465522 SLKQ9H2G2 1235 aaPredicted RBP25.51■■□□□ 1.68
ITGA4-204ENST00000465522 SWAP70Q9UH65 585 aa25.51■■□□□ 1.68
ITGA4-204ENST00000465522 EPS15P42566 896 aa25.51■■□□□ 1.67
ITGA4-204ENST00000465522 EVCP57679 992 aa25.51■■□□□ 1.67
ITGA4-204ENST00000465522 STK3Q13188 491 aa25.51■■□□□ 1.67
ITGA4-204ENST00000465522 WTAPQ15007 396 aa25.51■■□□□ 1.67
ITGA4-204ENST00000465522 FAM83AQ86UY5 434 aa25.51■■□□□ 1.67
ITGA4-204ENST00000465522 TMTC2Q8N394 836 aa25.51■■□□□ 1.67
ITGA4-204ENST00000465522 CRACR2BQ8N4Y2 399 aaPredicted RBP25.51■■□□□ 1.67
ITGA4-204ENST00000465522 ZSCAN10Q96SZ4 725 aaPredicted RBP25.51■■□□□ 1.67
ITGA4-204ENST00000465522 LY9Q9HBG7 655 aa25.51■■□□□ 1.67
ITGA4-204ENST00000465522 TSPY3P0CV98 308 aa25.5■■□□□ 1.67
ITGA4-204ENST00000465522 TSPY8P0CW00 308 aa25.5■■□□□ 1.67
ITGA4-204ENST00000465522 RASA1P20936 1047 aa25.5■■□□□ 1.67
ITGA4-204ENST00000465522 LMOD1P29536 600 aaPredicted RBP25.5■■□□□ 1.67
ITGA4-204ENST00000465522 NFXL1Q6ZNB6 911 aa25.5■■□□□ 1.67
ITGA4-204ENST00000465522 FOXP4Q8IVH2 680 aaPredicted RBP25.5■■□□□ 1.67
ITGA4-204ENST00000465522 NECAB1Q8N987 351 aa25.5■■□□□ 1.67
ITGA4-204ENST00000465522 INTS4Q96HW7 963 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms