RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FOCADQ5VW36 1801 aa20.06■□□□□ 0.8
EXOSC3-203ENST00000465229 COL2A1P02458 1487 aaPredicted RBP20.06■□□□□ 0.8
EXOSC3-203ENST00000465229 MCCP23508 829 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 KRT26Q7Z3Y9 468 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 SULF1Q8IWU6 871 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 GPBP1L1Q9HC44 474 aaPredicted RBP20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 PI4KBQ9UBF8 816 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 TACC3Q9Y6A5 838 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 HLA-DOAP06340 250 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 TSGA10IPQ3SY00 556 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 TBC1D10CQ8IV04 446 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 DYNLL2Q96FJ2 89 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 CSRNP1Q96S65 589 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 INCENPQ9NQS7 918 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 CHMP5Q9NZZ3 219 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 SNX14Q9Y5W7 946 aa20.05■□□□□ 0.8
EXOSC3-203ENST00000465229 POLR2AP24928 1970 aaKnown RBP20.04■□□□□ 0.8
EXOSC3-203ENST00000465229 SLURP2P0DP57 97 aa20.04■□□□□ 0.8
EXOSC3-203ENST00000465229 ZKSCAN1P17029 563 aaPredicted RBP20.04■□□□□ 0.8
EXOSC3-203ENST00000465229 DDIT3P35638 169 aa20.04■□□□□ 0.8
EXOSC3-203ENST00000465229 PRAMEF18Q5VWM3 479 aa20.04■□□□□ 0.8
EXOSC3-203ENST00000465229 DLK2Q6UY11 383 aa20.04■□□□□ 0.8
EXOSC3-203ENST00000465229 LDHDQ86WU2 507 aa20.04■□□□□ 0.8
EXOSC3-203ENST00000465229 STK11IPQ8N1F8 1099 aa20.04■□□□□ 0.8
EXOSC3-203ENST00000465229 CIZ1Q9ULV3 898 aaPredicted RBP20.04■□□□□ 0.8
EXOSC3-203ENST00000465229 PPP2R3BQ9Y5P8 575 aa20.04■□□□□ 0.8
EXOSC3-203ENST00000465229 ADM5C9JUS6 153 aa20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 GABPAQ06546 454 aa20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 NBPF12Q5TAG4 269 aaPredicted RBP20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 USP48Q86UV5 1035 aa20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 METTL16Q86W50 562 aaKnown RBP20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 FOXP4Q8IVH2 680 aaPredicted RBP20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 EHD4Q9H223 541 aa20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 SERPINB13Q9UIV8 391 aa20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 DDX60LQ5H9U9 1706 aaKnown RBP20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 NAV1Q8NEY1 1877 aa20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 MYH1P12882 1939 aa20.03■□□□□ 0.8
EXOSC3-203ENST00000465229 FGRP09769 529 aa20.02■□□□□ 0.8
EXOSC3-203ENST00000465229 YY1P25490 414 aa20.02■□□□□ 0.8
EXOSC3-203ENST00000465229 AKNAD1Q5T1N1 836 aa20.02■□□□□ 0.8
EXOSC3-203ENST00000465229 MAP1SQ66K74 1059 aaPredicted RBP20.02■□□□□ 0.8
EXOSC3-203ENST00000465229 STOX1Q6ZVD7 989 aa20.02■□□□□ 0.8
EXOSC3-203ENST00000465229 CDC37L1Q7L3B6 337 aa20.02■□□□□ 0.8
EXOSC3-203ENST00000465229 GLIS2Q9BZE0 524 aaPredicted RBP20.02■□□□□ 0.8
EXOSC3-203ENST00000465229 ROBO3Q96MS0 1386 aa20.02■□□□□ 0.8
EXOSC3-203ENST00000465229 E7EWF7 191 aa20.02■□□□□ 0.79
EXOSC3-203ENST00000465229 ST18O60284 1047 aa20.02■□□□□ 0.79
EXOSC3-203ENST00000465229 SLC3A2P08195 630 aaKnown RBP20.02■□□□□ 0.79
EXOSC3-203ENST00000465229 C16orf86Q6ZW13 317 aa20.02■□□□□ 0.79
EXOSC3-203ENST00000465229 SLC44A5Q8NCS7 719 aa20.02■□□□□ 0.79
EXOSC3-203ENST00000465229 STAG1Q8WVM7 1258 aa20.02■□□□□ 0.79
EXOSC3-203ENST00000465229 CD2BP2O95400 341 aaKnown RBP20.01■□□□□ 0.79
EXOSC3-203ENST00000465229 CDK8P49336 464 aa20.01■□□□□ 0.79
EXOSC3-203ENST00000465229 MAP3K10Q02779 954 aa20.01■□□□□ 0.79
EXOSC3-203ENST00000465229 ADCK5Q3MIX3 580 aa20.01■□□□□ 0.79
EXOSC3-203ENST00000465229 MFSD6Q6ZSS7 791 aa20.01■□□□□ 0.79
EXOSC3-203ENST00000465229 DNAJC18Q9H819 358 aa20.01■□□□□ 0.79
EXOSC3-203ENST00000465229 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.01■□□□□ 0.79
EXOSC3-203ENST00000465229 FAM196BA6NMK8 535 aa20■□□□□ 0.79
EXOSC3-203ENST00000465229 KIF3CO14782 793 aa20■□□□□ 0.79
EXOSC3-203ENST00000465229 MIGA2Q7L4E1 593 aa20■□□□□ 0.79
EXOSC3-203ENST00000465229 CRACR2BQ8N4Y2 399 aaPredicted RBP20■□□□□ 0.79
EXOSC3-203ENST00000465229 RNF41Q9H4P4 317 aaPredicted RBP20■□□□□ 0.79
EXOSC3-203ENST00000465229 TBC1D12O60347 775 aa19.99■□□□□ 0.79
EXOSC3-203ENST00000465229 PRDM1O75626 825 aa19.99■□□□□ 0.79
EXOSC3-203ENST00000465229 PDE4BQ07343 736 aa19.99■□□□□ 0.79
EXOSC3-203ENST00000465229 KRT32Q14532 448 aa19.99■□□□□ 0.79
EXOSC3-203ENST00000465229 NKX2-3Q8TAU0 364 aa19.99■□□□□ 0.79
EXOSC3-203ENST00000465229 HERC5Q9UII4 1024 aaKnown RBP19.99■□□□□ 0.79
EXOSC3-203ENST00000465229 NEDD4P46934 1319 aa19.99■□□□□ 0.79
EXOSC3-203ENST00000465229 ORC4O43929 436 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 PCP11498 1178 aaKnown RBP19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 SHMT1P34896 483 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 COL9A3Q14050 684 aaPredicted RBP19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 SUPT20HL1Q3ZLR7 823 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 MKNK2Q9HBH9 465 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 SWAP70Q9UH65 585 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 TAOK2Q9UL54 1235 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 MCM2P49736 904 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 CHADLQ6NUI6 762 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 CDCA5Q96FF9 252 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 JAKMIP1Q96N16 626 aaKnown RBP19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 NEK1Q96PY6 1258 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 TRIM34Q9BYJ4 488 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 ZNF287Q9HBT7 754 aa19.98■□□□□ 0.79
EXOSC3-203ENST00000465229 RASA1P20936 1047 aa19.97■□□□□ 0.79
EXOSC3-203ENST00000465229 TRDNQ13061 729 aa19.97■□□□□ 0.79
EXOSC3-203ENST00000465229 TATDN1Q6P1N9 297 aa19.97■□□□□ 0.79
EXOSC3-203ENST00000465229 ZNF784Q8NCA9 323 aaPredicted RBP19.97■□□□□ 0.79
EXOSC3-203ENST00000465229 CNNM2Q9H8M5 875 aa19.97■□□□□ 0.79
EXOSC3-203ENST00000465229 TOMM22Q9NS69 142 aa19.97■□□□□ 0.79
EXOSC3-203ENST00000465229 B4E1Z4 1266 aa19.96■□□□□ 0.79
EXOSC3-203ENST00000465229 TRAF5O00463 557 aa19.96■□□□□ 0.79
EXOSC3-203ENST00000465229 RRP12Q5JTH9 1297 aaKnown RBP19.96■□□□□ 0.79
EXOSC3-203ENST00000465229 NCOA7Q8NI08 942 aa19.96■□□□□ 0.79
EXOSC3-203ENST00000465229 HOOK2Q96ED9 719 aa19.96■□□□□ 0.79
EXOSC3-203ENST00000465229 TM6SF1Q9BZW5 370 aa19.96■□□□□ 0.79
EXOSC3-203ENST00000465229 KRT23Q9C075 422 aa19.96■□□□□ 0.79
EXOSC3-203ENST00000465229 SIPA1L1O43166 1804 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms