RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 FAM196BA6NMK8 535 aa18.08■□□□□ 0.48
MCF2L-220ENST00000464800 HMGCRP04035 888 aa18.08■□□□□ 0.48
MCF2L-220ENST00000464800 GCLCP48506 637 aaPredicted RBP18.08■□□□□ 0.48
MCF2L-220ENST00000464800 RHBDL3P58872 404 aa18.08■□□□□ 0.48
MCF2L-220ENST00000464800 PABPC4Q13310 644 aaKnown RBP eCLIP18.08■□□□□ 0.48
MCF2L-220ENST00000464800 XAGE2Q96GT9 111 aa18.08■□□□□ 0.48
MCF2L-220ENST00000464800 TBC1D2Q9BYX2 928 aa18.08■□□□□ 0.48
MCF2L-220ENST00000464800 API5Q9BZZ5 524 aaKnown RBP18.08■□□□□ 0.48
MCF2L-220ENST00000464800 MAST2Q6P0Q8 1798 aa18.08■□□□□ 0.48
MCF2L-220ENST00000464800 SOX1O00570 391 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-220ENST00000464800 HMGCS2P54868 508 aa18.07■□□□□ 0.48
MCF2L-220ENST00000464800 GSTO1P78417 241 aa18.07■□□□□ 0.48
MCF2L-220ENST00000464800 SPP2Q13103 211 aa18.07■□□□□ 0.48
MCF2L-220ENST00000464800 ANKLE1Q8NAG6 615 aa18.07■□□□□ 0.48
MCF2L-220ENST00000464800 ZNF280CQ8ND82 737 aa18.07■□□□□ 0.48
MCF2L-220ENST00000464800 DIS3LQ8TF46 1054 aaKnown RBP18.07■□□□□ 0.48
MCF2L-220ENST00000464800 MEIS3Q99687 375 aa18.07■□□□□ 0.48
MCF2L-220ENST00000464800 STAP2Q9UGK3 403 aa18.07■□□□□ 0.48
MCF2L-220ENST00000464800 NOB1Q9ULX3 412 aaKnown RBP18.07■□□□□ 0.48
MCF2L-220ENST00000464800 MAP4K4O95819 1239 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-220ENST00000464800 TFCP2Q12800 502 aa18.06■□□□□ 0.48
MCF2L-220ENST00000464800 SLC17A8Q8NDX2 589 aa18.06■□□□□ 0.48
MCF2L-220ENST00000464800 ZNF384Q8TF68 577 aa18.06■□□□□ 0.48
MCF2L-220ENST00000464800 SIPA1L1O43166 1804 aa18.06■□□□□ 0.48
MCF2L-220ENST00000464800 CDK5RAP2Q96SN8 1893 aa18.05■□□□□ 0.48
MCF2L-220ENST00000464800 LDHCP07864 332 aa18.05■□□□□ 0.48
MCF2L-220ENST00000464800 C7orf61Q8IZ16 206 aa18.05■□□□□ 0.48
MCF2L-220ENST00000464800 LRCH3Q96II8 777 aa18.05■□□□□ 0.48
MCF2L-220ENST00000464800 ASCC2Q9H1I8 757 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-220ENST00000464800 FOCADQ5VW36 1801 aa18.05■□□□□ 0.48
MCF2L-220ENST00000464800 RPTORQ8N122 1335 aa18.04■□□□□ 0.48
MCF2L-220ENST00000464800 USP17L5A8MUK1 530 aa18.04■□□□□ 0.48
MCF2L-220ENST00000464800 SRGAP3O43295 1099 aa18.04■□□□□ 0.48
MCF2L-220ENST00000464800 CT47B1P0C2W7 299 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-220ENST00000464800 CAP2P40123 477 aa18.04■□□□□ 0.48
MCF2L-220ENST00000464800 SPATA5Q8NB90 893 aa18.04■□□□□ 0.48
MCF2L-220ENST00000464800 NSUN4Q96CB9 384 aaKnown RBP18.04■□□□□ 0.48
MCF2L-220ENST00000464800 CDCA7LQ96GN5 454 aa18.04■□□□□ 0.48
MCF2L-220ENST00000464800 NEUROD6Q96NK8 337 aa18.04■□□□□ 0.48
MCF2L-220ENST00000464800 AS3MTQ9HBK9 375 aa18.04■□□□□ 0.48
MCF2L-220ENST00000464800 HMX1Q9NP08 348 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-220ENST00000464800 HMG20BQ9P0W2 317 aa18.04■□□□□ 0.48
MCF2L-220ENST00000464800 DLL1O00548 723 aa18.03■□□□□ 0.48
MCF2L-220ENST00000464800 SH3D19Q5HYK7 790 aa18.03■□□□□ 0.48
MCF2L-220ENST00000464800 GORABQ5T7V8 394 aa18.03■□□□□ 0.48
MCF2L-220ENST00000464800 PI16Q6UXB8 463 aa18.03■□□□□ 0.48
MCF2L-220ENST00000464800 NBPF3Q9H094 633 aa18.03■□□□□ 0.48
MCF2L-220ENST00000464800 RAI14Q9P0K7 980 aa18.03■□□□□ 0.48
MCF2L-220ENST00000464800 HERC5Q9UII4 1024 aaKnown RBP18.03■□□□□ 0.48
MCF2L-220ENST00000464800 GNAI3P08754 354 aa18.02■□□□□ 0.48
MCF2L-220ENST00000464800 BMP8BP34820 402 aa18.02■□□□□ 0.48
MCF2L-220ENST00000464800 IRX3P78415 501 aaPredicted RBP18.02■□□□□ 0.48
MCF2L-220ENST00000464800 MTX1Q13505 466 aa18.02■□□□□ 0.48
MCF2L-220ENST00000464800 TBC1D9Q6ZT07 1266 aa18.02■□□□□ 0.48
MCF2L-220ENST00000464800 TEX11Q8IYF3 940 aa18.02■□□□□ 0.48
MCF2L-220ENST00000464800 GDF15Q99988 308 aa18.02■□□□□ 0.48
MCF2L-220ENST00000464800 NOL10Q9BSC4 688 aaKnown RBP18.02■□□□□ 0.48
MCF2L-220ENST00000464800 MORF4L1Q9UBU8 362 aa18.02■□□□□ 0.48
MCF2L-220ENST00000464800 GJD2Q9UKL4 321 aa18.02■□□□□ 0.48
MCF2L-220ENST00000464800 ZMYND8Q9ULU4 1186 aaPredicted RBP18.02■□□□□ 0.48
MCF2L-220ENST00000464800 ARID4AP29374 1257 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-220ENST00000464800 TRIM32Q13049 653 aa18.01■□□□□ 0.47
MCF2L-220ENST00000464800 MTMR2Q13614 643 aa18.01■□□□□ 0.47
MCF2L-220ENST00000464800 RRP1BQ14684 758 aaKnown RBP18.01■□□□□ 0.47
MCF2L-220ENST00000464800 TRIB2Q92519 343 aa18.01■□□□□ 0.47
MCF2L-220ENST00000464800 C11orf49Q9H6J7 331 aa18.01■□□□□ 0.47
MCF2L-220ENST00000464800 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-220ENST00000464800 TRMT2AQ8IZ69 625 aaKnown RBP18■□□□□ 0.47
MCF2L-220ENST00000464800 SH3RF3Q8TEJ3 882 aaPredicted RBP18■□□□□ 0.47
MCF2L-220ENST00000464800 SOCS4Q8WXH5 440 aa18■□□□□ 0.47
MCF2L-220ENST00000464800 TMOD4Q9NZQ9 345 aa18■□□□□ 0.47
MCF2L-220ENST00000464800 LRP2BPQ9P2M1 347 aa18■□□□□ 0.47
MCF2L-220ENST00000464800 PI4KBQ9UBF8 816 aa18■□□□□ 0.47
MCF2L-220ENST00000464800 LAMA3Q16787 3333 aa17.99■□□□□ 0.47
MCF2L-220ENST00000464800 ASNSP08243 561 aa17.99■□□□□ 0.47
MCF2L-220ENST00000464800 PRKAR2AP13861 404 aaKnown RBP17.99■□□□□ 0.47
MCF2L-220ENST00000464800 MNX1P50219 401 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-220ENST00000464800 GPR153Q6NV75 609 aa17.99■□□□□ 0.47
MCF2L-220ENST00000464800 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
MCF2L-220ENST00000464800 DHX36Q9H2U1 1008 aaKnown RBP17.99■□□□□ 0.47
MCF2L-220ENST00000464800 OGDHLQ9ULD0 1010 aa17.99■□□□□ 0.47
MCF2L-220ENST00000464800 FRMPD3Q5JV73 1810 aa17.99■□□□□ 0.47
MCF2L-220ENST00000464800 UQCRFS1P1P0C7P4 283 aa17.98■□□□□ 0.47
MCF2L-220ENST00000464800 SYN1P17600 705 aa17.98■□□□□ 0.47
MCF2L-220ENST00000464800 CYP2B6P20813 491 aa17.98■□□□□ 0.47
MCF2L-220ENST00000464800 MCAMP43121 646 aa17.98■□□□□ 0.47
MCF2L-220ENST00000464800 BACE1P56817 501 aa17.98■□□□□ 0.47
MCF2L-220ENST00000464800 NUDT12Q9BQG2 462 aa17.98■□□□□ 0.47
MCF2L-220ENST00000464800 MYO5AQ9Y4I1 1855 aaKnown RBP17.97■□□□□ 0.47
MCF2L-220ENST00000464800 BAG3O95817 575 aa17.97■□□□□ 0.47
MCF2L-220ENST00000464800 PLCG2P16885 1265 aa17.97■□□□□ 0.47
MCF2L-220ENST00000464800 HOXA7P31268 230 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-220ENST00000464800 MAGEA10P43363 369 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-220ENST00000464800 PDE3AQ14432 1141 aa17.97■□□□□ 0.47
MCF2L-220ENST00000464800 MAP3K21Q5TCX8 1036 aa17.97■□□□□ 0.47
MCF2L-220ENST00000464800 TRMT44Q8IYL2 757 aaKnown RBP17.97■□□□□ 0.47
MCF2L-220ENST00000464800 GPRC5AQ8NFJ5 357 aa17.97■□□□□ 0.47
MCF2L-220ENST00000464800 ARHGAP45Q92619 1136 aa17.97■□□□□ 0.47
MCF2L-220ENST00000464800 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
MCF2L-220ENST00000464800 AATFQ9NY61 560 aaKnown RBP eCLIP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms