RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 NOL10Q9BSC4 688 aaKnown RBP25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 SMIM22K7EJ46 135 aa25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 SRGNP10124 158 aa25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 IFNAR1P17181 557 aa25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 PDE6BP35913 854 aa25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 PPP4CP60510 307 aa25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 SSRP1Q08945 709 aaKnown RBP25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 RTN1Q16799 776 aa25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 ZNF654Q8IZM8 581 aa25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 PGBD1Q96JS3 809 aa25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 USP28Q96RU2 1077 aa25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 QSER1Q2KHR3 1735 aa25.28■■□□□ 1.64
PDLIM2-216ENST00000464275 CCDC196A0A1B0GTZ2 297 aa25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 C6orf229H3BNL8 230 aa25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 CERS3Q8IU89 383 aa25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 PHKBQ93100 1093 aa25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 ZSCAN10Q96SZ4 725 aaPredicted RBP25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 FOCADQ5VW36 1801 aa25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 RANBP6O60518 1105 aaKnown RBP25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 FMNL1O95466 1100 aaPredicted RBP25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 LIG1P18858 919 aa25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 PPP2R5BQ15173 497 aa25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 IQCA1Q86XH1 822 aa25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 WASF1Q92558 559 aa25.27■■□□□ 1.64
PDLIM2-216ENST00000464275 MROH7-TTC4A0A0A0MT08 1334 aa25.26■■□□□ 1.63
PDLIM2-216ENST00000464275 MYH1P12882 1939 aa25.26■■□□□ 1.63
PDLIM2-216ENST00000464275 MMP10P09238 476 aa25.26■■□□□ 1.63
PDLIM2-216ENST00000464275 ALDH1B1P30837 517 aa25.26■■□□□ 1.63
PDLIM2-216ENST00000464275 GRIK5Q16478 980 aa25.26■■□□□ 1.63
PDLIM2-216ENST00000464275 TBC1D22AQ8WUA7 517 aa25.26■■□□□ 1.63
PDLIM2-216ENST00000464275 CCDC39Q9UFE4 941 aa25.26■■□□□ 1.63
PDLIM2-216ENST00000464275 KIF23Q02241 960 aaPredicted RBP25.25■■□□□ 1.63
PDLIM2-216ENST00000464275 USP5P45974 858 aa25.25■■□□□ 1.63
PDLIM2-216ENST00000464275 NT5C2P49902 561 aa25.25■■□□□ 1.63
PDLIM2-216ENST00000464275 CEBPZQ03701 1054 aaKnown RBP25.25■■□□□ 1.63
PDLIM2-216ENST00000464275 ENAHQ8N8S7 591 aaPredicted RBP25.25■■□□□ 1.63
PDLIM2-216ENST00000464275 BICD2Q8TD16 824 aa25.25■■□□□ 1.63
PDLIM2-216ENST00000464275 SLC26A6Q9BXS9 759 aa25.25■■□□□ 1.63
PDLIM2-216ENST00000464275 DDX19AQ9NUU7 478 aaKnown RBP25.25■■□□□ 1.63
PDLIM2-216ENST00000464275 RTEL1Q9NZ71 1219 aa25.25■■□□□ 1.63
PDLIM2-216ENST00000464275 PDE4BQ07343 736 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 DIXDC1Q155Q3 683 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 KRT40Q6A162 431 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 FANCBQ8NB91 859 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 SH3RF3Q8TEJ3 882 aaPredicted RBP25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 MCM9Q9NXL9 1143 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 MKRN1Q9UHC7 482 aaKnown RBP25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 FAM205AQ6ZU69 1335 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 ZNF500O60304 480 aaPredicted RBP25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 PRDM1O75626 825 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 TRIM29Q14134 588 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 TRIM22Q8IYM9 498 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 FBXO41Q8TF61 875 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 AIFM3Q96NN9 605 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 NUP62CLQ9H1M0 184 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 GJB4Q9NTQ9 266 aa25.24■■□□□ 1.63
PDLIM2-216ENST00000464275 CYP2D6P10635 497 aa25.23■■□□□ 1.63
PDLIM2-216ENST00000464275 IFIT1BQ5T764 474 aaKnown RBP25.23■■□□□ 1.63
PDLIM2-216ENST00000464275 SLF2Q8IX21 1173 aa25.23■■□□□ 1.63
PDLIM2-216ENST00000464275 MASTLQ96GX5 879 aa25.23■■□□□ 1.63
PDLIM2-216ENST00000464275 FTOQ9C0B1 505 aaKnown RBP eCLIP25.23■■□□□ 1.63
PDLIM2-216ENST00000464275 DDX60LQ5H9U9 1706 aaKnown RBP25.22■■□□□ 1.63
PDLIM2-216ENST00000464275 TERF1P54274 439 aa25.22■■□□□ 1.63
PDLIM2-216ENST00000464275 MYSM1Q5VVJ2 828 aa25.22■■□□□ 1.63
PDLIM2-216ENST00000464275 NUP133Q8WUM0 1156 aa25.22■■□□□ 1.63
PDLIM2-216ENST00000464275 RTFDC1Q9BY42 306 aaPredicted RBP25.22■■□□□ 1.63
PDLIM2-216ENST00000464275 TPM2P07951 284 aa25.22■■□□□ 1.63
PDLIM2-216ENST00000464275 C12orf60Q5U649 245 aa25.22■■□□□ 1.63
PDLIM2-216ENST00000464275 COA1Q9GZY4 146 aa25.22■■□□□ 1.63
PDLIM2-216ENST00000464275 DACT1Q9NYF0 836 aa25.22■■□□□ 1.63
PDLIM2-216ENST00000464275 KIF28PB7ZC32 967 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 OFD1O75665 1012 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 POLR3DP05423 398 aaPredicted RBP25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 USP17L8P0C7I0 530 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 CALM1P0DP23 149 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 CALM2P0DP24 149 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 CALM3P0DP25 149 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 MFSD14BQ5SR56 506 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 CATIPQ7Z7H3 387 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 NBPF11Q86T75 865 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 AMOTL1Q8IY63 956 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 MPNDQ8N594 471 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 FUCA2Q9BTY2 467 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 POLR3EQ9NVU0 708 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 ROBO3Q96MS0 1386 aa25.21■■□□□ 1.63
PDLIM2-216ENST00000464275 GPR75-ASB3A0A0A6YYF3 556 aa25.2■■□□□ 1.63
PDLIM2-216ENST00000464275 YEATS4O95619 227 aa25.2■■□□□ 1.63
PDLIM2-216ENST00000464275 EVX2Q03828 476 aa25.2■■□□□ 1.63
PDLIM2-216ENST00000464275 CRACR2BQ8N4Y2 399 aaPredicted RBP25.2■■□□□ 1.63
PDLIM2-216ENST00000464275 FAM163AQ96GL9 167 aaPredicted RBP25.2■■□□□ 1.63
PDLIM2-216ENST00000464275 ZKSCAN5Q9Y2L8 839 aa25.2■■□□□ 1.63
PDLIM2-216ENST00000464275 DEXIO95424 95 aa25.2■■□□□ 1.62
PDLIM2-216ENST00000464275 MAP3K11Q16584 847 aa25.2■■□□□ 1.62
PDLIM2-216ENST00000464275 TMX4Q9H1E5 349 aaPredicted RBP25.2■■□□□ 1.62
PDLIM2-216ENST00000464275 CLSTN2Q9H4D0 955 aa25.2■■□□□ 1.62
PDLIM2-216ENST00000464275 DDAH1O94760 285 aa25.19■■□□□ 1.62
PDLIM2-216ENST00000464275 PLCG2P16885 1265 aa25.19■■□□□ 1.62
PDLIM2-216ENST00000464275 BTDP43251 543 aa25.19■■□□□ 1.62
PDLIM2-216ENST00000464275 RBM28Q9NW13 759 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms