RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 HDXQ7Z353 690 aa7.75□□□□□ -1.17
ITGB1-208ENST00000464001 WFDC3Q8IUB2 231 aa7.75□□□□□ -1.17
ITGB1-208ENST00000464001 SNX11Q9Y5W9 270 aa7.75□□□□□ -1.17
ITGB1-208ENST00000464001 AK5Q9Y6K8 562 aa7.75□□□□□ -1.17
ITGB1-208ENST00000464001 BIN1O00499 593 aa7.74□□□□□ -1.17
ITGB1-208ENST00000464001 FUT4P22083 530 aa7.74□□□□□ -1.17
ITGB1-208ENST00000464001 ZNF792Q3KQV3 632 aa7.74□□□□□ -1.17
ITGB1-208ENST00000464001 EAPPQ56P03 285 aaPredicted RBP7.74□□□□□ -1.17
ITGB1-208ENST00000464001 HEXIM2Q96MH2 286 aaKnown RBP7.74□□□□□ -1.17
ITGB1-208ENST00000464001 PLAGL2Q9UPG8 496 aa7.74□□□□□ -1.17
ITGB1-208ENST00000464001 U3KQE9 123 aa7.74□□□□□ -1.17
ITGB1-208ENST00000464001 ITIH2P19823 946 aa7.73□□□□□ -1.17
ITGB1-208ENST00000464001 LMNB1P20700 586 aa7.73□□□□□ -1.17
ITGB1-208ENST00000464001 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
ITGB1-208ENST00000464001 TTBK2Q6IQ55 1244 aa7.73□□□□□ -1.17
ITGB1-208ENST00000464001 FAM214BQ7L5A3 538 aa7.73□□□□□ -1.17
ITGB1-208ENST00000464001 KRTAP1-3Q8IUG1 177 aa7.73□□□□□ -1.17
ITGB1-208ENST00000464001 TNKS2Q9H2K2 1166 aa7.73□□□□□ -1.17
ITGB1-208ENST00000464001 SNCAIPQ9Y6H5 919 aa7.73□□□□□ -1.17
ITGB1-208ENST00000464001 PRAMEF27A3QJZ7 478 aa7.72□□□□□ -1.17
ITGB1-208ENST00000464001 ANKRD33BA6NCL7 494 aa7.72□□□□□ -1.17
ITGB1-208ENST00000464001 LRIG2O94898 1065 aa7.72□□□□□ -1.17
ITGB1-208ENST00000464001 YBX3P16989 372 aaKnown RBP eCLIP7.72□□□□□ -1.17
ITGB1-208ENST00000464001 INPP5AQ14642 412 aa7.72□□□□□ -1.17
ITGB1-208ENST00000464001 CCDC85BQ15834 202 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-208ENST00000464001 LRFN4Q6PJG9 635 aa7.72□□□□□ -1.17
ITGB1-208ENST00000464001 SND1Q7KZF4 910 aaKnown RBP eCLIP7.72□□□□□ -1.17
ITGB1-208ENST00000464001 CYFIP1Q7L576 1253 aa7.72□□□□□ -1.17
ITGB1-208ENST00000464001 UBE3DQ7Z6J8 389 aa7.72□□□□□ -1.17
ITGB1-208ENST00000464001 KRTAP19-1Q8IUB9 90 aa7.72□□□□□ -1.17
ITGB1-208ENST00000464001 PI4K2BQ8TCG2 481 aa7.72□□□□□ -1.17
ITGB1-208ENST00000464001 PLPPR2Q96GM1 343 aa7.72□□□□□ -1.17
ITGB1-208ENST00000464001 GNAT3A8MTJ3 354 aa7.71□□□□□ -1.18
ITGB1-208ENST00000464001 RPS26P62854 115 aaKnown RBP7.71□□□□□ -1.18
ITGB1-208ENST00000464001 PTPN11Q06124 597 aaPredicted RBP7.71□□□□□ -1.18
ITGB1-208ENST00000464001 ANGEL2Q5VTE6 544 aaKnown RBP7.71□□□□□ -1.18
ITGB1-208ENST00000464001 ARMCX6Q7L4S7 300 aa7.71□□□□□ -1.18
ITGB1-208ENST00000464001 AEBP1Q8IUX7 1158 aa7.71□□□□□ -1.18
ITGB1-208ENST00000464001 DUSP9Q99956 384 aaKnown RBP7.71□□□□□ -1.18
ITGB1-208ENST00000464001 WNT10AQ9GZT5 417 aa7.71□□□□□ -1.18
ITGB1-208ENST00000464001 PDIA4P13667 645 aaKnown RBP7.7□□□□□ -1.18
ITGB1-208ENST00000464001 CD96P40200 585 aa7.7□□□□□ -1.18
ITGB1-208ENST00000464001 ASB11Q8WXH4 323 aa7.7□□□□□ -1.18
ITGB1-208ENST00000464001 GAL3ST3Q96A11 431 aa7.7□□□□□ -1.18
ITGB1-208ENST00000464001 FOXQ1Q9C009 403 aa7.7□□□□□ -1.18
ITGB1-208ENST00000464001 RC3H2Q9HBD1 1191 aaKnown RBP7.7□□□□□ -1.18
ITGB1-208ENST00000464001 PRDM5Q9NQX1 630 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-208ENST00000464001 EOMESO95936 686 aa7.69□□□□□ -1.18
ITGB1-208ENST00000464001 RNASE1P07998 156 aaKnown RBP7.69□□□□□ -1.18
ITGB1-208ENST00000464001 ETF1P62495 437 aaKnown RBP7.69□□□□□ -1.18
ITGB1-208ENST00000464001 WIPI1Q5MNZ9 446 aaPredicted RBP7.69□□□□□ -1.18
ITGB1-208ENST00000464001 ATG4DQ86TL0 474 aaPredicted RBP7.69□□□□□ -1.18
ITGB1-208ENST00000464001 MAPK8IP1Q9UQF2 711 aa7.69□□□□□ -1.18
ITGB1-208ENST00000464001 PAPLNO95428 1278 aa7.68□□□□□ -1.18
ITGB1-208ENST00000464001 CAP2P40123 477 aa7.68□□□□□ -1.18
ITGB1-208ENST00000464001 SLBPQ14493 270 aaKnown RBP eCLIP7.68□□□□□ -1.18
ITGB1-208ENST00000464001 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.68□□□□□ -1.18
ITGB1-208ENST00000464001 HID1Q8IV36 788 aa7.68□□□□□ -1.18
ITGB1-208ENST00000464001 SPACA3Q8IXA5 215 aa7.68□□□□□ -1.18
ITGB1-208ENST00000464001 MFSD2AQ8NA29 543 aa7.68□□□□□ -1.18
ITGB1-208ENST00000464001 MBNL3Q9NUK0 354 aaKnown RBP7.68□□□□□ -1.18
ITGB1-208ENST00000464001 RLBP1P12271 317 aa7.67□□□□□ -1.18
ITGB1-208ENST00000464001 CLCN7P51798 805 aa7.67□□□□□ -1.18
ITGB1-208ENST00000464001 NKPD1Q17RQ9 610 aa7.67□□□□□ -1.18
ITGB1-208ENST00000464001 OGFOD2Q6N063 350 aa7.67□□□□□ -1.18
ITGB1-208ENST00000464001 SLC23A3Q6PIS1 610 aa7.67□□□□□ -1.18
ITGB1-208ENST00000464001 AGMOQ6ZNB7 445 aa7.67□□□□□ -1.18
ITGB1-208ENST00000464001 FBRSQ9HAH7 460 aa7.67□□□□□ -1.18
ITGB1-208ENST00000464001 TPX2Q9ULW0 747 aaKnown RBP7.67□□□□□ -1.18
ITGB1-208ENST00000464001 TACC3Q9Y6A5 838 aa7.67□□□□□ -1.18
ITGB1-208ENST00000464001 SLITRK5O94991 958 aa7.66□□□□□ -1.18
ITGB1-208ENST00000464001 LIG3P49916 1009 aa7.66□□□□□ -1.18
ITGB1-208ENST00000464001 IKZF1Q13422 519 aa7.66□□□□□ -1.18
ITGB1-208ENST00000464001 MIPEPQ99797 713 aa7.66□□□□□ -1.18
ITGB1-208ENST00000464001 RNF19AQ9NV58 838 aa7.66□□□□□ -1.18
ITGB1-208ENST00000464001 PARP2Q9UGN5 583 aa7.66□□□□□ -1.18
ITGB1-208ENST00000464001 ADAMTS6Q9UKP5 1117 aa7.66□□□□□ -1.18
ITGB1-208ENST00000464001 PCDHB5Q9Y5E4 795 aa7.66□□□□□ -1.18
ITGB1-208ENST00000464001 GRK4P32298 578 aa7.65□□□□□ -1.18
ITGB1-208ENST00000464001 CDK8P49336 464 aa7.65□□□□□ -1.18
ITGB1-208ENST00000464001 PSMD2Q13200 908 aa7.65□□□□□ -1.18
ITGB1-208ENST00000464001 SEPT6Q14141 434 aa7.65□□□□□ -1.18
ITGB1-208ENST00000464001 MAP3K11Q16584 847 aa7.65□□□□□ -1.18
ITGB1-208ENST00000464001 NKG7Q16617 165 aa7.65□□□□□ -1.18
ITGB1-208ENST00000464001 SFRP5Q5T4F7 317 aa7.65□□□□□ -1.18
ITGB1-208ENST00000464001 DIEXFQ68CQ4 756 aaKnown RBP7.65□□□□□ -1.18
ITGB1-208ENST00000464001 ZNF746Q6NUN9 644 aaPredicted RBP7.65□□□□□ -1.18
ITGB1-208ENST00000464001 POU5F2Q8N7G0 328 aa7.65□□□□□ -1.18
ITGB1-208ENST00000464001 LRRN4CLQ8ND94 238 aa7.65□□□□□ -1.18
ITGB1-208ENST00000464001 MIR1-1HGQ9H1L0 117 aa7.65□□□□□ -1.18
ITGB1-208ENST00000464001 BTBD11A6QL63 1104 aa7.64□□□□□ -1.19
ITGB1-208ENST00000464001 FAM155AB1AL88 458 aaPredicted RBP7.64□□□□□ -1.19
ITGB1-208ENST00000464001 DAB2P98082 770 aa7.64□□□□□ -1.19
ITGB1-208ENST00000464001 XPCQ01831 940 aaPredicted RBP7.64□□□□□ -1.19
ITGB1-208ENST00000464001 ZP2Q05996 745 aa7.64□□□□□ -1.19
ITGB1-208ENST00000464001 TAF1CQ15572 869 aaPredicted RBP7.64□□□□□ -1.19
ITGB1-208ENST00000464001 C22orf34Q6ZV56 151 aa7.64□□□□□ -1.19
ITGB1-208ENST00000464001 PITPNM2Q9BZ72 1349 aa7.63□□□□□ -1.19
ITGB1-208ENST00000464001 GFRA2O00451 464 aa7.63□□□□□ -1.19
ITGB1-208ENST00000464001 CST3P01034 146 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms