RNA–Protein interactions for RNA: ENST00000463238.1

FAM53A-203, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-203ENST00000463238 TFCP2Q12800 502 aa18.46■□□□□ 0.55
FAM53A-203ENST00000463238 MTX1Q13505 466 aa18.46■□□□□ 0.55
FAM53A-203ENST00000463238 ZNF280CQ8ND82 737 aa18.46■□□□□ 0.55
FAM53A-203ENST00000463238 ARHGAP45Q92619 1136 aa18.46■□□□□ 0.55
FAM53A-203ENST00000463238 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.55
FAM53A-203ENST00000463238 DEFB118Q96PH6 123 aa18.46■□□□□ 0.55
FAM53A-203ENST00000463238 PAK6Q9NQU5 681 aaPredicted RBP18.46■□□□□ 0.55
FAM53A-203ENST00000463238 TAOK2Q9UL54 1235 aa18.46■□□□□ 0.55
FAM53A-203ENST00000463238 SZT2Q5T011 3432 aa18.45■□□□□ 0.54
FAM53A-203ENST00000463238 SPATA5Q8NB90 893 aa18.45■□□□□ 0.54
FAM53A-203ENST00000463238 NOL10Q9BSC4 688 aaKnown RBP18.45■□□□□ 0.54
FAM53A-203ENST00000463238 PRO3102Q9H379 93 aa18.45■□□□□ 0.54
FAM53A-203ENST00000463238 PTPRFP10586 1907 aa18.45■□□□□ 0.54
FAM53A-203ENST00000463238 SPP2Q13103 211 aa18.44■□□□□ 0.54
FAM53A-203ENST00000463238 TREML2Q5T2D2 321 aa18.44■□□□□ 0.54
FAM53A-203ENST00000463238 MIER1Q8N108 512 aa18.44■□□□□ 0.54
FAM53A-203ENST00000463238 NSUN4Q96CB9 384 aaKnown RBP18.44■□□□□ 0.54
FAM53A-203ENST00000463238 AS3MTQ9HBK9 375 aa18.44■□□□□ 0.54
FAM53A-203ENST00000463238 RAI14Q9P0K7 980 aa18.44■□□□□ 0.54
FAM53A-203ENST00000463238 HMG20BQ9P0W2 317 aa18.44■□□□□ 0.54
FAM53A-203ENST00000463238 HERC5Q9UII4 1024 aaKnown RBP18.44■□□□□ 0.54
FAM53A-203ENST00000463238 USP17L5A8MUK1 530 aa18.43■□□□□ 0.54
FAM53A-203ENST00000463238 SLURP2P0DP57 97 aa18.43■□□□□ 0.54
FAM53A-203ENST00000463238 NECAB2Q7Z6G3 386 aa18.43■□□□□ 0.54
FAM53A-203ENST00000463238 CCDC84Q86UT8 332 aaPredicted RBP18.43■□□□□ 0.54
FAM53A-203ENST00000463238 ANKLE1Q8NAG6 615 aa18.43■□□□□ 0.54
FAM53A-203ENST00000463238 CRISPLD2Q9H0B8 497 aa18.43■□□□□ 0.54
FAM53A-203ENST00000463238 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.43■□□□□ 0.54
FAM53A-203ENST00000463238 PHIPQ8WWQ0 1821 aa18.43■□□□□ 0.54
FAM53A-203ENST00000463238 HMGCRP04035 888 aa18.42■□□□□ 0.54
FAM53A-203ENST00000463238 UQCRFS1P1P0C7P4 283 aa18.42■□□□□ 0.54
FAM53A-203ENST00000463238 ARID4AP29374 1257 aaPredicted RBP18.42■□□□□ 0.54
FAM53A-203ENST00000463238 CAP2P40123 477 aa18.42■□□□□ 0.54
FAM53A-203ENST00000463238 TEX11Q8IYF3 940 aa18.42■□□□□ 0.54
FAM53A-203ENST00000463238 ZNF384Q8TF68 577 aa18.42■□□□□ 0.54
FAM53A-203ENST00000463238 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.42■□□□□ 0.54
FAM53A-203ENST00000463238 FAM196BA6NMK8 535 aa18.41■□□□□ 0.54
FAM53A-203ENST00000463238 IPO8O15397 1037 aaKnown RBP18.41■□□□□ 0.54
FAM53A-203ENST00000463238 PLCG2P16885 1265 aa18.41■□□□□ 0.54
FAM53A-203ENST00000463238 RARSP54136 660 aaKnown RBP18.41■□□□□ 0.54
FAM53A-203ENST00000463238 HMGCS2P54868 508 aa18.41■□□□□ 0.54
FAM53A-203ENST00000463238 DHX36Q9H2U1 1008 aaKnown RBP18.41■□□□□ 0.54
FAM53A-203ENST00000463238 LRP2BPQ9P2M1 347 aa18.41■□□□□ 0.54
FAM53A-203ENST00000463238 PI4KBQ9UBF8 816 aa18.41■□□□□ 0.54
FAM53A-203ENST00000463238 BAG3O95817 575 aa18.4■□□□□ 0.54
FAM53A-203ENST00000463238 GNAI2P04899 355 aa18.4■□□□□ 0.54
FAM53A-203ENST00000463238 G3BP1Q13283 466 aaKnown RBP eCLIP18.4■□□□□ 0.54
FAM53A-203ENST00000463238 SH3D19Q5HYK7 790 aa18.4■□□□□ 0.54
FAM53A-203ENST00000463238 TBC1D9Q6ZT07 1266 aa18.4■□□□□ 0.54
FAM53A-203ENST00000463238 PAWRQ96IZ0 340 aaKnown RBP18.4■□□□□ 0.54
FAM53A-203ENST00000463238 ASCC2Q9H1I8 757 aaPredicted RBP18.4■□□□□ 0.54
FAM53A-203ENST00000463238 ASNSP08243 561 aa18.39■□□□□ 0.53
FAM53A-203ENST00000463238 IRX3P78415 501 aaPredicted RBP18.39■□□□□ 0.53
FAM53A-203ENST00000463238 PI16Q6UXB8 463 aa18.39■□□□□ 0.53
FAM53A-203ENST00000463238 WDR18Q9BV38 432 aa18.39■□□□□ 0.53
FAM53A-203ENST00000463238 HMX1Q9NP08 348 aaPredicted RBP18.39■□□□□ 0.53
FAM53A-203ENST00000463238 TMOD4Q9NZQ9 345 aa18.39■□□□□ 0.53
FAM53A-203ENST00000463238 RPTORQ8N122 1335 aa18.39■□□□□ 0.53
FAM53A-203ENST00000463238 LOC285556D6RIA3 1793 aa18.39■□□□□ 0.53
FAM53A-203ENST00000463238 IGSF3O75054 1194 aa18.38■□□□□ 0.53
FAM53A-203ENST00000463238 TRIM34Q9BYJ4 488 aa18.38■□□□□ 0.53
FAM53A-203ENST00000463238 GINM1Q9NU53 330 aa18.38■□□□□ 0.53
FAM53A-203ENST00000463238 MORF4L1Q9UBU8 362 aa18.38■□□□□ 0.53
FAM53A-203ENST00000463238 MCAMP43121 646 aa18.37■□□□□ 0.53
FAM53A-203ENST00000463238 BACE1P56817 501 aa18.37■□□□□ 0.53
FAM53A-203ENST00000463238 NAA16Q6N069 864 aaPredicted RBP18.37■□□□□ 0.53
FAM53A-203ENST00000463238 SH3RF3Q8TEJ3 882 aaPredicted RBP18.37■□□□□ 0.53
FAM53A-203ENST00000463238 NBPF3Q9H094 633 aa18.37■□□□□ 0.53
FAM53A-203ENST00000463238 GJD2Q9UKL4 321 aa18.37■□□□□ 0.53
FAM53A-203ENST00000463238 C19orf81C9J6K1 198 aa18.36■□□□□ 0.53
FAM53A-203ENST00000463238 HOXA7P31268 230 aaPredicted RBP18.36■□□□□ 0.53
FAM53A-203ENST00000463238 MTMR2Q13614 643 aa18.36■□□□□ 0.53
FAM53A-203ENST00000463238 CCDC158Q5M9N0 1113 aa18.36■□□□□ 0.53
FAM53A-203ENST00000463238 TRMT44Q8IYL2 757 aaKnown RBP18.36■□□□□ 0.53
FAM53A-203ENST00000463238 GTF3C2Q8WUA4 911 aaPredicted RBP18.36■□□□□ 0.53
FAM53A-203ENST00000463238 SOCS4Q8WXH5 440 aa18.36■□□□□ 0.53
FAM53A-203ENST00000463238 STAP2Q9UGK3 403 aa18.36■□□□□ 0.53
FAM53A-203ENST00000463238 PPP4CP60510 307 aa18.35■□□□□ 0.53
FAM53A-203ENST00000463238 RRP1BQ14684 758 aaKnown RBP18.35■□□□□ 0.53
FAM53A-203ENST00000463238 TTC39AQ5SRH9 613 aa18.35■□□□□ 0.53
FAM53A-203ENST00000463238 ATF7IPQ6VMQ6 1270 aa18.35■□□□□ 0.53
FAM53A-203ENST00000463238 FOXP4Q8IVH2 680 aaPredicted RBP18.35■□□□□ 0.53
FAM53A-203ENST00000463238 CRACR2BQ8N4Y2 399 aaPredicted RBP18.35■□□□□ 0.53
FAM53A-203ENST00000463238 GPRC5AQ8NFJ5 357 aa18.35■□□□□ 0.53
FAM53A-203ENST00000463238 DIS3LQ8TF46 1054 aaKnown RBP18.35■□□□□ 0.53
FAM53A-203ENST00000463238 NUDT12Q9BQG2 462 aa18.35■□□□□ 0.53
FAM53A-203ENST00000463238 GPR108Q9NPR9 543 aa18.35■□□□□ 0.53
FAM53A-203ENST00000463238 AATFQ9NY61 560 aaKnown RBP eCLIP18.35■□□□□ 0.53
FAM53A-203ENST00000463238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
FAM53A-203ENST00000463238 DOCK3Q8IZD9 2030 aa18.35■□□□□ 0.53
FAM53A-203ENST00000463238 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
FAM53A-203ENST00000463238 XRCC5P13010 732 aaKnown RBP18.34■□□□□ 0.53
FAM53A-203ENST00000463238 BMP8BP34820 402 aa18.34■□□□□ 0.53
FAM53A-203ENST00000463238 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
FAM53A-203ENST00000463238 CCAR1Q8IX12 1150 aaKnown RBP18.34■□□□□ 0.53
FAM53A-203ENST00000463238 C7orf61Q8IZ16 206 aa18.34■□□□□ 0.53
FAM53A-203ENST00000463238 FLT1P17948 1338 aa18.33■□□□□ 0.53
FAM53A-203ENST00000463238 PNMA6EA0A0J9YXQ4 647 aa18.33■□□□□ 0.52
FAM53A-203ENST00000463238 USP17L10C9JJH3 530 aa18.33■□□□□ 0.52
FAM53A-203ENST00000463238 HLA-DOAP06340 250 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms