RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 IRF5Q13568 498 aa24.49■■□□□ 1.51
HLA-F-222ENST00000462777 CCDC84Q86UT8 332 aaPredicted RBP24.49■■□□□ 1.51
HLA-F-222ENST00000462777 ANKRD13CQ8N6S4 541 aa24.49■■□□□ 1.51
HLA-F-222ENST00000462777 ZNF280CQ8ND82 737 aa24.49■■□□□ 1.51
HLA-F-222ENST00000462777 ZNF384Q8TF68 577 aa24.49■■□□□ 1.51
HLA-F-222ENST00000462777 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.49■■□□□ 1.51
HLA-F-222ENST00000462777 FAM196BA6NMK8 535 aa24.48■■□□□ 1.51
HLA-F-222ENST00000462777 PLCG2P16885 1265 aa24.48■■□□□ 1.51
HLA-F-222ENST00000462777 CCDC158Q5M9N0 1113 aa24.48■■□□□ 1.51
HLA-F-222ENST00000462777 CLUAP1Q96AJ1 413 aa24.48■■□□□ 1.51
HLA-F-222ENST00000462777 UNC93B1Q9H1C4 597 aa24.48■■□□□ 1.51
HLA-F-222ENST00000462777 AS3MTQ9HBK9 375 aa24.48■■□□□ 1.51
HLA-F-222ENST00000462777 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.48■■□□□ 1.51
HLA-F-222ENST00000462777 HERC5Q9UII4 1024 aaKnown RBP24.48■■□□□ 1.51
HLA-F-222ENST00000462777 TAOK2Q9UL54 1235 aa24.48■■□□□ 1.51
HLA-F-222ENST00000462777 NR2E3Q9Y5X4 410 aa24.48■■□□□ 1.51
HLA-F-222ENST00000462777 PNMA6EA0A0J9YXQ4 647 aa24.47■■□□□ 1.51
HLA-F-222ENST00000462777 USP17L5A8MUK1 530 aa24.47■■□□□ 1.51
HLA-F-222ENST00000462777 FARP2O94887 1054 aaPredicted RBP24.47■■□□□ 1.51
HLA-F-222ENST00000462777 SGPL1O95470 568 aa24.47■■□□□ 1.51
HLA-F-222ENST00000462777 CAP2P40123 477 aa24.47■■□□□ 1.51
HLA-F-222ENST00000462777 MCAMP43121 646 aa24.47■■□□□ 1.51
HLA-F-222ENST00000462777 GCLCP48506 637 aaPredicted RBP24.47■■□□□ 1.51
HLA-F-222ENST00000462777 OS9Q13438 667 aaPredicted RBP24.47■■□□□ 1.51
HLA-F-222ENST00000462777 FAM110CQ1W6H9 321 aa24.47■■□□□ 1.51
HLA-F-222ENST00000462777 TTC39AQ5SRH9 613 aa24.47■■□□□ 1.51
HLA-F-222ENST00000462777 TREML2Q5T2D2 321 aa24.47■■□□□ 1.51
HLA-F-222ENST00000462777 DHX36Q9H2U1 1008 aaKnown RBP24.47■■□□□ 1.51
HLA-F-222ENST00000462777 PI4KBQ9UBF8 816 aa24.47■■□□□ 1.51
HLA-F-222ENST00000462777 DOCK2Q92608 1830 aa24.47■■□□□ 1.51
HLA-F-222ENST00000462777 BCAR3O75815 825 aa24.46■■□□□ 1.51
HLA-F-222ENST00000462777 TFRCP02786 760 aaKnown RBP24.46■■□□□ 1.51
HLA-F-222ENST00000462777 INHAP05111 366 aa24.46■■□□□ 1.51
HLA-F-222ENST00000462777 ELNP15502 786 aa24.46■■□□□ 1.51
HLA-F-222ENST00000462777 NAA16Q6N069 864 aaPredicted RBP24.46■■□□□ 1.51
HLA-F-222ENST00000462777 CHRDL2Q6WN34 429 aa24.46■■□□□ 1.51
HLA-F-222ENST00000462777 COL2A1P02458 1487 aaPredicted RBP24.45■■□□□ 1.51
HLA-F-222ENST00000462777 HMGCS2P54868 508 aa24.45■■□□□ 1.5
HLA-F-222ENST00000462777 UBE2Q1Q7Z7E8 422 aa24.45■■□□□ 1.5
HLA-F-222ENST00000462777 GPR108Q9NPR9 543 aa24.45■■□□□ 1.5
HLA-F-222ENST00000462777 SH3RF3Q8TEJ3 882 aaPredicted RBP24.44■■□□□ 1.5
HLA-F-222ENST00000462777 TRIM34Q9BYJ4 488 aa24.44■■□□□ 1.5
HLA-F-222ENST00000462777 AATFQ9NY61 560 aaKnown RBP eCLIP24.44■■□□□ 1.5
HLA-F-222ENST00000462777 ZKSCAN2Q63HK3 967 aa24.43■■□□□ 1.5
HLA-F-222ENST00000462777 DEFB118Q96PH6 123 aa24.43■■□□□ 1.5
HLA-F-222ENST00000462777 SNRKQ9NRH2 765 aa24.43■■□□□ 1.5
HLA-F-222ENST00000462777 IGSF3O75054 1194 aa24.42■■□□□ 1.5
HLA-F-222ENST00000462777 TNNI3KQ59H18 835 aa24.42■■□□□ 1.5
HLA-F-222ENST00000462777 CRACR2BQ8N4Y2 399 aaPredicted RBP24.42■■□□□ 1.5
HLA-F-222ENST00000462777 TMOD4Q9NZQ9 345 aa24.42■■□□□ 1.5
HLA-F-222ENST00000462777 TNNQ9UQP3 1299 aa24.42■■□□□ 1.5
HLA-F-222ENST00000462777 FPGT-TNNI3KV9GXZ4 949 aa24.42■■□□□ 1.5
HLA-F-222ENST00000462777 ASNSP08243 561 aa24.41■■□□□ 1.5
HLA-F-222ENST00000462777 PPP4CP60510 307 aa24.41■■□□□ 1.5
HLA-F-222ENST00000462777 SH3D19Q5HYK7 790 aa24.41■■□□□ 1.5
HLA-F-222ENST00000462777 FOXP4Q8IVH2 680 aaPredicted RBP24.41■■□□□ 1.5
HLA-F-222ENST00000462777 TMEM57Q8N5G2 664 aa24.41■■□□□ 1.5
HLA-F-222ENST00000462777 ASCC2Q9H1I8 757 aaPredicted RBP24.41■■□□□ 1.5
HLA-F-222ENST00000462777 SURF6O75683 361 aaKnown RBP24.4■■□□□ 1.5
HLA-F-222ENST00000462777 IRX3P78415 501 aaPredicted RBP24.4■■□□□ 1.5
HLA-F-222ENST00000462777 POLA2Q14181 598 aa24.4■■□□□ 1.5
HLA-F-222ENST00000462777 TGFBRAP1Q8WUH2 860 aa24.4■■□□□ 1.5
HLA-F-222ENST00000462777 WDR18Q9BV38 432 aa24.4■■□□□ 1.5
HLA-F-222ENST00000462777 DOCK1Q14185 1865 aa24.4■■□□□ 1.5
HLA-F-222ENST00000462777 EVI5O60447 810 aa24.39■■□□□ 1.49
HLA-F-222ENST00000462777 ATP8B2P98198 1209 aa24.39■■□□□ 1.49
HLA-F-222ENST00000462777 RRP1BQ14684 758 aaKnown RBP24.39■■□□□ 1.49
HLA-F-222ENST00000462777 DBNDD2Q9BQY9 259 aa24.39■■□□□ 1.49
HLA-F-222ENST00000462777 PAK6Q9NQU5 681 aaPredicted RBP24.39■■□□□ 1.49
HLA-F-222ENST00000462777 GINM1Q9NU53 330 aa24.39■■□□□ 1.49
HLA-F-222ENST00000462777 RBM27Q9P2N5 1060 aaKnown RBP24.39■■□□□ 1.49
HLA-F-222ENST00000462777 BACE1P56817 501 aa24.38■■□□□ 1.49
HLA-F-222ENST00000462777 MAPKAPK5Q8IW41 473 aa24.38■■□□□ 1.49
HLA-F-222ENST00000462777 FTSJ3Q8IY81 847 aaKnown RBP24.38■■□□□ 1.49
HLA-F-222ENST00000462777 SSH3Q8TE77 659 aa24.38■■□□□ 1.49
HLA-F-222ENST00000462777 ZNF512BQ96KM6 892 aaPredicted RBP24.38■■□□□ 1.49
HLA-F-222ENST00000462777 C19orf81C9J6K1 198 aa24.37■■□□□ 1.49
HLA-F-222ENST00000462777 HMGCRP04035 888 aa24.37■■□□□ 1.49
HLA-F-222ENST00000462777 HLA-DOAP06340 250 aa24.37■■□□□ 1.49
HLA-F-222ENST00000462777 MTMR2Q13614 643 aa24.37■■□□□ 1.49
HLA-F-222ENST00000462777 CEP290O15078 2479 aa24.37■■□□□ 1.49
HLA-F-222ENST00000462777 FLT1P17948 1338 aa24.36■■□□□ 1.49
HLA-F-222ENST00000462777 ZBTB7BO15156 539 aaPredicted RBP24.36■■□□□ 1.49
HLA-F-222ENST00000462777 CYP2E1P05181 493 aaPredicted RBP24.36■■□□□ 1.49
HLA-F-222ENST00000462777 CRISPLD2Q9H0B8 497 aa24.36■■□□□ 1.49
HLA-F-222ENST00000462777 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.36■■□□□ 1.49
HLA-F-222ENST00000462777 USP17L10C9JJH3 530 aa24.35■■□□□ 1.49
HLA-F-222ENST00000462777 HOXA7P31268 230 aaPredicted RBP24.35■■□□□ 1.49
HLA-F-222ENST00000462777 NECAB2Q7Z6G3 386 aa24.35■■□□□ 1.49
HLA-F-222ENST00000462777 HMX1Q9NP08 348 aaPredicted RBP24.35■■□□□ 1.49
HLA-F-222ENST00000462777 MORF4L1Q9UBU8 362 aa24.35■■□□□ 1.49
HLA-F-222ENST00000462777 PALD1Q9ULE6 856 aa24.35■■□□□ 1.49
HLA-F-222ENST00000462777 MGAMO43451 1857 aa24.34■■□□□ 1.49
HLA-F-222ENST00000462777 ZAP70P43403 619 aa24.34■■□□□ 1.49
HLA-F-222ENST00000462777 METTL16Q86W50 562 aaKnown RBP24.34■■□□□ 1.49
HLA-F-222ENST00000462777 CERS3Q8IU89 383 aa24.34■■□□□ 1.49
HLA-F-222ENST00000462777 CCAR1Q8IX12 1150 aaKnown RBP24.34■■□□□ 1.49
HLA-F-222ENST00000462777 GJD2Q9UKL4 321 aa24.34■■□□□ 1.49
HLA-F-222ENST00000462777 RPTORQ8N122 1335 aa24.34■■□□□ 1.49
HLA-F-222ENST00000462777 CYP7A1P22680 504 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms