RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 MYSM1Q5VVJ2 828 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 SPECC1LQ69YQ0 1117 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 MTHFD1LQ6UB35 978 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 KDM7AQ6ZMT4 941 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 AENQ8WTP8 325 aaKnown RBP10.4□□□□□ -0.74
LINC01140-201ENST00000461990 PLEKHG4BQ96PX9 1271 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 ALS2CR12Q96Q35 445 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 TUBE1Q9UJT0 475 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 ATP7BP35670 1465 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 ENO4A6NNW6 628 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 ZSCAN9O15535 394 aaPredicted RBP10.4□□□□□ -0.74
LINC01140-201ENST00000461990 FECHP22830 423 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 GOLGA8FQ08AF8 430 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 GOLGA8DPQ0D2H9 430 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 RIPK1Q13546 671 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 AMOTQ4VCS5 1084 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 KIRREL3Q8IZU9 778 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 ATL2Q8NHH9 583 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 CCHCR1Q8TD31 782 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 PHACTR3Q96KR7 559 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 FANCLQ9NW38 375 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 BLOC1S6Q9UL45 172 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 C15orf41Q9Y2V0 281 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 ARHGAP5Q13017 1502 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 CAMSAP1Q5T5Y3 1602 aa10.4□□□□□ -0.74
LINC01140-201ENST00000461990 SPDYE3A6NKU9 549 aa10.4□□□□□ -0.75
LINC01140-201ENST00000461990 DNAJC8O75937 253 aaPredicted RBP10.4□□□□□ -0.75
LINC01140-201ENST00000461990 PYGLP06737 847 aa10.4□□□□□ -0.75
LINC01140-201ENST00000461990 SLC3A2P08195 630 aaKnown RBP10.4□□□□□ -0.75
LINC01140-201ENST00000461990 RPS6KB1P23443 525 aa10.4□□□□□ -0.75
LINC01140-201ENST00000461990 MTX1Q13505 466 aa10.4□□□□□ -0.75
LINC01140-201ENST00000461990 CCNI2Q6ZMN8 369 aaPredicted RBP10.4□□□□□ -0.75
LINC01140-201ENST00000461990 LLPHQ9BRT6 129 aaKnown RBP10.4□□□□□ -0.75
LINC01140-201ENST00000461990 SENP2Q9HC62 589 aa10.4□□□□□ -0.75
LINC01140-201ENST00000461990 SPG7Q9UQ90 795 aa10.4□□□□□ -0.75
LINC01140-201ENST00000461990 JCADQ9P266 1359 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 PPP1R12BO60237 982 aaPredicted RBP10.39□□□□□ -0.75
LINC01140-201ENST00000461990 LSP1P33241 339 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 PAPOLAP51003 745 aaKnown RBP10.39□□□□□ -0.75
LINC01140-201ENST00000461990 ZNF569Q5MCW4 686 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 THEMIS2Q5TEJ8 643 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 ALS2CLQ60I27 953 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 CREB3L3Q68CJ9 461 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 C1orf131Q8NDD1 294 aaKnown RBP10.39□□□□□ -0.75
LINC01140-201ENST00000461990 CCDC114Q96M63 670 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 USP28Q96RU2 1077 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 SLX1AQ9BQ83 275 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 CENPHQ9H3R5 247 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 FAM184BQ9ULE4 1060 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 TTF2Q9UNY4 1162 aaKnown RBP10.39□□□□□ -0.75
LINC01140-201ENST00000461990 NEXMIFQ5QGS0 1516 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 HHATQ5VTY9 493 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 DESI2Q9BSY9 194 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 PRDM16Q9HAZ2 1276 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 RTEL1Q9NZ71 1219 aa10.39□□□□□ -0.75
LINC01140-201ENST00000461990 FAM107AO95990 144 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 BLMHQ13867 455 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.38□□□□□ -0.75
LINC01140-201ENST00000461990 TRAPPC11Q7Z392 1133 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 SLC35F6Q8N357 371 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 NBPF15Q8N660 670 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 FAM81AQ8TBF8 368 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 NSMCE1Q8WV22 266 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 TBC1D5Q92609 795 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 MAP4K1Q92918 833 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 SCLT1Q96NL6 688 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 PCDHA7Q9UN72 937 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 H3BQV1 296 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 SASH1O94885 1247 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 ATP6V1G2O95670 118 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 RPSAP08865 295 aaKnown RBP10.38□□□□□ -0.75
LINC01140-201ENST00000461990 NDUFA8P51970 172 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 E2F5Q15329 346 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 PTGISQ16647 500 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 ACCSLQ4AC99 568 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 ANKRD20A8PQ5CZ79 823 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 IFFO2Q5TF58 517 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 B4GALNT2Q8NHY0 566 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 CUL5Q93034 780 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 CACNA1FO60840 1977 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 AGLP35573 1532 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 PNMA6EA0A0J9YXQ4 647 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 GHRP10912 638 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 PYGBP11216 843 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 CCDC38Q502W7 563 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 MYCBPAPQ8TBZ2 947 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 CNKSR1Q969H4 720 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 NUP58Q9BVL2 599 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 C19orf44Q9H6X5 657 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 LZTFL1Q9NQ48 299 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 HOOK1Q9UJC3 728 aaKnown RBP10.38□□□□□ -0.75
LINC01140-201ENST00000461990 ZNF232Q9UNY5 417 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 PXDNLA1KZ92 1463 aa10.38□□□□□ -0.75
LINC01140-201ENST00000461990 MAP2P11137 1827 aaKnown RBP10.37□□□□□ -0.75
LINC01140-201ENST00000461990 LINGO3P0C6S8 592 aa10.37□□□□□ -0.75
LINC01140-201ENST00000461990 PDCLQ13371 301 aa10.37□□□□□ -0.75
LINC01140-201ENST00000461990 TTMPQ5BVD1 217 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms