RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 KRTAP17-1Q9BYP8 105 aa8.33□□□□□ -1.08
CFHR3-204ENST00000461558 CSADQ9Y600 493 aa8.33□□□□□ -1.08
CFHR3-204ENST00000461558 PNMA6FA0A0J9YX94 578 aa8.32□□□□□ -1.08
CFHR3-204ENST00000461558 SOWAHDA6NJG2 315 aa8.32□□□□□ -1.08
CFHR3-204ENST00000461558 TSPAN15O95858 294 aa8.32□□□□□ -1.08
CFHR3-204ENST00000461558 CFPP27918 469 aa8.32□□□□□ -1.08
CFHR3-204ENST00000461558 ZP2Q05996 745 aa8.32□□□□□ -1.08
CFHR3-204ENST00000461558 NKPD1Q17RQ9 610 aa8.32□□□□□ -1.08
CFHR3-204ENST00000461558 PPP1R16BQ96T49 567 aa8.32□□□□□ -1.08
CFHR3-204ENST00000461558 ZNF503-AS2A6NEH8 195 aa8.31□□□□□ -1.08
CFHR3-204ENST00000461558 DCDC2CA8MYV0 355 aa8.31□□□□□ -1.08
CFHR3-204ENST00000461558 TRIM37O94972 964 aa8.31□□□□□ -1.08
CFHR3-204ENST00000461558 RING1Q06587 406 aa8.31□□□□□ -1.08
CFHR3-204ENST00000461558 DSC3Q14574 896 aa8.31□□□□□ -1.08
CFHR3-204ENST00000461558 GRIN3AQ8TCU5 1115 aa8.31□□□□□ -1.08
CFHR3-204ENST00000461558 PICK1Q9NRD5 415 aa8.31□□□□□ -1.08
CFHR3-204ENST00000461558 DCTN4Q9UJW0 460 aa8.31□□□□□ -1.08
CFHR3-204ENST00000461558 ENC1O14682 589 aa8.3□□□□□ -1.08
CFHR3-204ENST00000461558 FANCGO15287 622 aa8.3□□□□□ -1.08
CFHR3-204ENST00000461558 BMP6P22004 513 aa8.3□□□□□ -1.08
CFHR3-204ENST00000461558 CLCN7P51798 805 aa8.3□□□□□ -1.08
CFHR3-204ENST00000461558 ENOX2Q16206 610 aaKnown RBP8.3□□□□□ -1.08
CFHR3-204ENST00000461558 LILRA6Q6PI73 481 aa8.3□□□□□ -1.08
CFHR3-204ENST00000461558 TPTE2Q6XPS3 522 aa8.3□□□□□ -1.08
CFHR3-204ENST00000461558 C12orf40Q86WS4 652 aa8.3□□□□□ -1.08
CFHR3-204ENST00000461558 RETREG2Q8NC44 543 aa8.3□□□□□ -1.08
CFHR3-204ENST00000461558 CTNND2Q9UQB3 1225 aa8.3□□□□□ -1.08
CFHR3-204ENST00000461558 SAMM50Q9Y512 469 aa8.3□□□□□ -1.08
CFHR3-204ENST00000461558 PITPNM2Q9BZ72 1349 aa8.29□□□□□ -1.08
CFHR3-204ENST00000461558 GNAT3A8MTJ3 354 aa8.29□□□□□ -1.08
CFHR3-204ENST00000461558 PAGE1O75459 146 aa8.29□□□□□ -1.08
CFHR3-204ENST00000461558 EOMESO95936 686 aa8.29□□□□□ -1.08
CFHR3-204ENST00000461558 ZBTB37Q5TC79 503 aa8.29□□□□□ -1.08
CFHR3-204ENST00000461558 LRRC56Q8IYG6 542 aaPredicted RBP8.29□□□□□ -1.08
CFHR3-204ENST00000461558 CEP44Q9C0F1 390 aa8.29□□□□□ -1.08
CFHR3-204ENST00000461558 TREHO43280 583 aa8.28□□□□□ -1.08
CFHR3-204ENST00000461558 GSTT1P30711 240 aa8.28□□□□□ -1.08
CFHR3-204ENST00000461558 PLCB3Q01970 1234 aa8.28□□□□□ -1.08
CFHR3-204ENST00000461558 LCE5AQ5TCM9 118 aa8.28□□□□□ -1.08
CFHR3-204ENST00000461558 PRDM5Q9NQX1 630 aaPredicted RBP8.28□□□□□ -1.08
CFHR3-204ENST00000461558 BIN2Q9UBW5 565 aaPredicted RBP8.28□□□□□ -1.08
CFHR3-204ENST00000461558 PPM1HQ9ULR3 514 aa8.28□□□□□ -1.08
CFHR3-204ENST00000461558 MAPK8IP1Q9UQF2 711 aa8.28□□□□□ -1.08
CFHR3-204ENST00000461558 LLGL2Q6P1M3 1020 aa8.27□□□□□ -1.09
CFHR3-204ENST00000461558 LCNL1Q6ZST4 164 aa8.27□□□□□ -1.09
CFHR3-204ENST00000461558 CDC37L1Q7L3B6 337 aa8.27□□□□□ -1.09
CFHR3-204ENST00000461558 ARMCX6Q7L4S7 300 aa8.27□□□□□ -1.09
CFHR3-204ENST00000461558 ANKLE2Q86XL3 938 aa8.27□□□□□ -1.09
CFHR3-204ENST00000461558 C1QL4Q86Z23 238 aa8.27□□□□□ -1.09
CFHR3-204ENST00000461558 KCT2Q8NC54 265 aa8.27□□□□□ -1.09
CFHR3-204ENST00000461558 LIN37Q96GY3 246 aaPredicted RBP8.27□□□□□ -1.09
CFHR3-204ENST00000461558 FOXQ1Q9C009 403 aa8.27□□□□□ -1.09
CFHR3-204ENST00000461558 LMCD1Q9NZU5 365 aa8.27□□□□□ -1.09
CFHR3-204ENST00000461558 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.26□□□□□ -1.09
CFHR3-204ENST00000461558 FBXO24O75426 580 aa8.26□□□□□ -1.09
CFHR3-204ENST00000461558 PDE4CQ08493 712 aa8.26□□□□□ -1.09
CFHR3-204ENST00000461558 RASIP1Q5U651 963 aa8.26□□□□□ -1.09
CFHR3-204ENST00000461558 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
CFHR3-204ENST00000461558 SIAH1Q8IUQ4 282 aa8.26□□□□□ -1.09
CFHR3-204ENST00000461558 SRCIN1Q9C0H9 1055 aa8.26□□□□□ -1.09
CFHR3-204ENST00000461558 PCDHA4Q9UN74 947 aa8.26□□□□□ -1.09
CFHR3-204ENST00000461558 NCANO14594 1321 aa8.26□□□□□ -1.09
CFHR3-204ENST00000461558 LRIG2O94898 1065 aa8.25□□□□□ -1.09
CFHR3-204ENST00000461558 AFMP43652 599 aa8.25□□□□□ -1.09
CFHR3-204ENST00000461558 LRRC14Q15048 493 aa8.25□□□□□ -1.09
CFHR3-204ENST00000461558 FYB2Q5VWT5 728 aa8.25□□□□□ -1.09
CFHR3-204ENST00000461558 SCARA3Q6AZY7 606 aa8.25□□□□□ -1.09
CFHR3-204ENST00000461558 SYDE1Q6ZW31 735 aaPredicted RBP8.25□□□□□ -1.09
CFHR3-204ENST00000461558 PRRG2O14669 202 aa8.24□□□□□ -1.09
CFHR3-204ENST00000461558 ZSCAN22P10073 491 aaPredicted RBP8.24□□□□□ -1.09
CFHR3-204ENST00000461558 MAPK1P28482 360 aa8.24□□□□□ -1.09
CFHR3-204ENST00000461558 MPZL3Q6UWV2 235 aa8.24□□□□□ -1.09
CFHR3-204ENST00000461558 FBF1Q8TES7 1133 aa8.24□□□□□ -1.09
CFHR3-204ENST00000461558 ELMO3Q96BJ8 720 aa8.24□□□□□ -1.09
CFHR3-204ENST00000461558 B8ZZF3 427 aa8.23□□□□□ -1.09
CFHR3-204ENST00000461558 SLITRK5O94991 958 aa8.23□□□□□ -1.09
CFHR3-204ENST00000461558 GLI1P08151 1106 aa8.23□□□□□ -1.09
CFHR3-204ENST00000461558 ZNF507Q8TCN5 953 aa8.23□□□□□ -1.09
CFHR3-204ENST00000461558 ANKRD24Q8TF21 1146 aa8.23□□□□□ -1.09
CFHR3-204ENST00000461558 HSPA12BQ96MM6 686 aa8.23□□□□□ -1.09
CFHR3-204ENST00000461558 OSBPL7Q9BZF2 842 aa8.23□□□□□ -1.09
CFHR3-204ENST00000461558 CARS2Q9HA77 564 aaKnown RBP8.23□□□□□ -1.09
CFHR3-204ENST00000461558 GNEQ9Y223 722 aaKnown RBP8.23□□□□□ -1.09
CFHR3-204ENST00000461558 PRR33A8MZF0 331 aa8.22□□□□□ -1.09
CFHR3-204ENST00000461558 FAM155AB1AL88 458 aaPredicted RBP8.22□□□□□ -1.09
CFHR3-204ENST00000461558 C22orf34Q6ZV56 151 aa8.22□□□□□ -1.09
CFHR3-204ENST00000461558 CYFIP1Q7L576 1253 aa8.22□□□□□ -1.09
CFHR3-204ENST00000461558 KIRREL1Q96J84 757 aa8.22□□□□□ -1.09
CFHR3-204ENST00000461558 ATP13A1Q9HD20 1204 aa8.22□□□□□ -1.09
CFHR3-204ENST00000461558 SEMA3GQ9NS98 782 aa8.22□□□□□ -1.09
CFHR3-204ENST00000461558 CYP8B1Q9UNU6 501 aa8.22□□□□□ -1.09
CFHR3-204ENST00000461558 PRAMEF27A3QJZ7 478 aa8.21□□□□□ -1.1
CFHR3-204ENST00000461558 INPP5AQ14642 412 aa8.21□□□□□ -1.1
CFHR3-204ENST00000461558 PCNX4Q63HM2 1172 aa8.21□□□□□ -1.1
CFHR3-204ENST00000461558 PRR23BQ6ZRT6 265 aa8.21□□□□□ -1.1
CFHR3-204ENST00000461558 MFSD4AQ8N468 514 aa8.21□□□□□ -1.1
CFHR3-204ENST00000461558 FBRSQ9HAH7 460 aa8.21□□□□□ -1.1
CFHR3-204ENST00000461558 TPX2Q9ULW0 747 aaKnown RBP8.21□□□□□ -1.1
CFHR3-204ENST00000461558 NFIBO00712 420 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 GIPC1O14908 333 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms