RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 WDHD1O75717 1129 aaPredicted RBP11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 HOXD10P28358 340 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 FCGRTP55899 365 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 UBXN2AP68543 259 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 EXOSC9Q06265 439 aaKnown RBP11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 TRIM32Q13049 653 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 DOCK1Q14185 1865 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 DIXDC1Q155Q3 683 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 CCDC27Q2M243 656 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 CDC42EP5Q6NZY7 148 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 CCDC84Q86UT8 332 aaPredicted RBP11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 FAM151AQ8WW52 585 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 MRIQ9BWK5 157 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 GPHNQ9NQX3 736 aaPredicted RBP11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 ZMYND8Q9ULU4 1186 aaPredicted RBP11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 DAGLAQ9Y4D2 1042 aa11.73□□□□□ -0.53
NECTIN3-202ENST00000461477 MROH5Q6ZUA9 1318 aa11.72□□□□□ -0.53
NECTIN3-202ENST00000461477 TFRCP02786 760 aaKnown RBP11.72□□□□□ -0.53
NECTIN3-202ENST00000461477 FGFR2P21802 821 aa11.72□□□□□ -0.53
NECTIN3-202ENST00000461477 DCAF15Q66K64 600 aa11.72□□□□□ -0.53
NECTIN3-202ENST00000461477 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
NECTIN3-202ENST00000461477 SH3BP5LQ7L8J4 393 aa11.72□□□□□ -0.53
NECTIN3-202ENST00000461477 DEFB123Q8N688 67 aa11.72□□□□□ -0.53
NECTIN3-202ENST00000461477 COL25A1Q9BXS0 654 aaPredicted RBP11.72□□□□□ -0.53
NECTIN3-202ENST00000461477 BICC1Q9H694 974 aaKnown RBP11.72□□□□□ -0.53
NECTIN3-202ENST00000461477 IL16Q14005 1332 aa11.71□□□□□ -0.53
NECTIN3-202ENST00000461477 MYH2Q9UKX2 1941 aa11.71□□□□□ -0.53
NECTIN3-202ENST00000461477 A0A0G2JLL6 359 aaPredicted RBP11.71□□□□□ -0.53
NECTIN3-202ENST00000461477 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.53
NECTIN3-202ENST00000461477 SYN1P17600 705 aa11.71□□□□□ -0.53
NECTIN3-202ENST00000461477 PRRT2Q7Z6L0 340 aaPredicted RBP11.71□□□□□ -0.53
NECTIN3-202ENST00000461477 C7orf61Q8IZ16 206 aa11.71□□□□□ -0.53
NECTIN3-202ENST00000461477 TBC1D22AQ8WUA7 517 aa11.71□□□□□ -0.53
NECTIN3-202ENST00000461477 PARK7Q99497 189 aaKnown RBP11.71□□□□□ -0.53
NECTIN3-202ENST00000461477 MTMR10Q9NXD2 777 aa11.71□□□□□ -0.53
NECTIN3-202ENST00000461477 RFX7Q2KHR2 1363 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 LOC285556D6RIA3 1793 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 UTYO14607 1347 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 ANP32CO43423 234 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 PDE8BO95263 885 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 PTPRAP18433 802 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 PRDX5P30044 214 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 BMP8BP34820 402 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 FOXK1P85037 733 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 IRF5Q13568 498 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 RABL6Q3YEC7 729 aaPredicted RBP11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 METTL24Q5JXM2 366 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 VPS37DQ86XT2 251 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 C9orf78Q9NZ63 289 aaPredicted RBP11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 TMOD2Q9NZR1 351 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 AFG3L2Q9Y4W6 797 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 REV3LO60673 3130 aa11.7□□□□□ -0.54
NECTIN3-202ENST00000461477 CXCL11O14625 94 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 FRAT2O75474 233 aaPredicted RBP11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 MAGEA10P43363 369 aaPredicted RBP11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 TREML2Q5T2D2 321 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 SLC4A10Q6U841 1118 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 GADL1Q6ZQY3 521 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 STXBP5LQ9Y2K9 1186 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 PCDHGA4Q9Y5G9 962 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 ZHX2Q9Y6X8 837 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 TTC28Q96AY4 2481 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 ATAD5Q96QE3 1844 aa11.69□□□□□ -0.54
NECTIN3-202ENST00000461477 TNPO2O14787 897 aaKnown RBP11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 PEX10O60683 326 aa11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 ALDH1L1O75891 902 aa11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 CAVIN4Q5BKX8 364 aa11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 SCYL3Q8IZE3 742 aa11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 ANKRD13CQ8N6S4 541 aa11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 HOOK2Q96ED9 719 aa11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 DDX4Q9NQI0 724 aaKnown RBP11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 SUGT1Q9Y2Z0 365 aa11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
NECTIN3-202ENST00000461477 PFASO15067 1338 aa11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 DDTLA6NHG4 134 aaPredicted RBP11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 RFX5P48382 616 aaPredicted RBP11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 RGS3P49796 1198 aa11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 LRIT3Q3SXY7 679 aa11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 KRTAP3-3Q9BYR6 98 aa11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 KRTAP3-2Q9BYR7 98 aa11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 SRCIN1Q9C0H9 1055 aa11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 GJD2Q9UKL4 321 aa11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 CHD9Q3L8U1 2897 aa11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 FRMPD3Q5JV73 1810 aa11.67□□□□□ -0.54
NECTIN3-202ENST00000461477 MAST3O60307 1309 aa11.66□□□□□ -0.54
NECTIN3-202ENST00000461477 COL2A1P02458 1487 aaPredicted RBP11.66□□□□□ -0.54
NECTIN3-202ENST00000461477 SIPA1L1O43166 1804 aa11.66□□□□□ -0.54
NECTIN3-202ENST00000461477 TRIM75PA6NK02 468 aa11.66□□□□□ -0.54
NECTIN3-202ENST00000461477 NUDT7P0C024 238 aa11.66□□□□□ -0.54
NECTIN3-202ENST00000461477 MAP3K10Q02779 954 aa11.66□□□□□ -0.54
NECTIN3-202ENST00000461477 DSG2Q14126 1118 aa11.66□□□□□ -0.54
NECTIN3-202ENST00000461477 RRP1BQ14684 758 aaKnown RBP11.66□□□□□ -0.54
NECTIN3-202ENST00000461477 ATG9AQ7Z3C6 839 aa11.66□□□□□ -0.54
NECTIN3-202ENST00000461477 NECAB2Q7Z6G3 386 aa11.66□□□□□ -0.54
NECTIN3-202ENST00000461477 GUCD1Q96NT3 240 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms