RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 UBN2Q6ZU65 1347 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 KLRG2A4D1S0 409 aaPredicted RBP8.89□□□□□ -0.99
NUP50-212ENST00000461194 FAM177BA6PVY3 158 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 ELL2O00472 640 aaPredicted RBP8.89□□□□□ -0.99
NUP50-212ENST00000461194 F11P03951 625 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 SRGNP10124 158 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 AIMP1Q12904 312 aaKnown RBP8.89□□□□□ -0.99
NUP50-212ENST00000461194 NAA30Q147X3 362 aaPredicted RBP8.89□□□□□ -0.99
NUP50-212ENST00000461194 PARP10Q53GL7 1025 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 HSP90AB3PQ58FF7 597 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 ARSJQ5FYB0 599 aaPredicted RBP8.89□□□□□ -0.99
NUP50-212ENST00000461194 SUSD4Q5VX71 490 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 WDR63Q8IWG1 891 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 C8orf58Q8NAV2 365 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 TSR2Q969E8 191 aaKnown RBP8.89□□□□□ -0.99
NUP50-212ENST00000461194 ZNF622Q969S3 477 aaKnown RBP eCLIP8.89□□□□□ -0.99
NUP50-212ENST00000461194 CHMP4AQ9BY43 222 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 PHACTR1Q9C0D0 580 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 NYXQ9GZU5 481 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.89□□□□□ -0.99
NUP50-212ENST00000461194 HYPKQ9NX55 129 aa8.89□□□□□ -0.99
NUP50-212ENST00000461194 N4BP2Q86UW6 1770 aaPredicted RBP8.89□□□□□ -0.99
NUP50-212ENST00000461194 IBTKQ9P2D0 1353 aaPredicted RBP8.88□□□□□ -0.99
NUP50-212ENST00000461194 GPTP24298 496 aa8.88□□□□□ -0.99
NUP50-212ENST00000461194 STYK1Q6J9G0 422 aa8.88□□□□□ -0.99
NUP50-212ENST00000461194 B4GALNT3Q6L9W6 998 aa8.88□□□□□ -0.99
NUP50-212ENST00000461194 ALDH16A1Q8IZ83 802 aa8.88□□□□□ -0.99
NUP50-212ENST00000461194 TSPYL6Q8N831 410 aa8.88□□□□□ -0.99
NUP50-212ENST00000461194 PLBD2Q8NHP8 589 aa8.88□□□□□ -0.99
NUP50-212ENST00000461194 MASTLQ96GX5 879 aa8.88□□□□□ -0.99
NUP50-212ENST00000461194 SEPT3Q9UH03 358 aa8.88□□□□□ -0.99
NUP50-212ENST00000461194 AFDNP55196 1824 aaKnown RBP8.88□□□□□ -0.99
NUP50-212ENST00000461194 ADCY9O60503 1353 aa8.87□□□□□ -0.99
NUP50-212ENST00000461194 CCER2I3L3R5 266 aa8.87□□□□□ -0.99
NUP50-212ENST00000461194 NTSR2O95665 410 aa8.87□□□□□ -0.99
NUP50-212ENST00000461194 NPR1P16066 1061 aa8.87□□□□□ -0.99
NUP50-212ENST00000461194 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
NUP50-212ENST00000461194 TCIRG1Q13488 830 aa8.87□□□□□ -0.99
NUP50-212ENST00000461194 CCDC30Q5VVM6 783 aa8.87□□□□□ -0.99
NUP50-212ENST00000461194 PPP1R42Q7Z4L9 355 aa8.87□□□□□ -0.99
NUP50-212ENST00000461194 PGBD3Q8N328 593 aa8.87□□□□□ -0.99
NUP50-212ENST00000461194 RUBCNLQ9H714 662 aa8.87□□□□□ -0.99
NUP50-212ENST00000461194 ABCC12Q96J65 1359 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 FANCIQ9NVI1 1328 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 PPFIA3O75145 1194 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 BRD1O95696 1058 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 VEGFBP49765 207 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 TWISTNBQ3B726 338 aaPredicted RBP8.86□□□□□ -0.99
NUP50-212ENST00000461194 CRY2Q49AN0 593 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 SLC10A5Q5PT55 438 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 C1orf53Q5VUE5 145 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 NLRP10Q86W26 655 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 C1orf216Q8TAB5 229 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 UTP14AQ9BVJ6 771 aaKnown RBP8.86□□□□□ -0.99
NUP50-212ENST00000461194 PHAXQ9H814 394 aaKnown RBP8.86□□□□□ -0.99
NUP50-212ENST00000461194 ZDHHC3Q9NYG2 299 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 CHD4Q14839 1912 aa8.86□□□□□ -0.99
NUP50-212ENST00000461194 BRCA1P38398 1863 aaKnown RBP8.85□□□□□ -0.99
NUP50-212ENST00000461194 RNF123Q5XPI4 1314 aa8.85□□□□□ -0.99
NUP50-212ENST00000461194 ATP4AP20648 1035 aa8.85□□□□□ -0.99
NUP50-212ENST00000461194 ALDH1B1P30837 517 aa8.85□□□□□ -0.99
NUP50-212ENST00000461194 C9orf131Q5VYM1 1079 aa8.85□□□□□ -0.99
NUP50-212ENST00000461194 PRPF40BQ6NWY9 871 aaKnown RBP8.85□□□□□ -0.99
NUP50-212ENST00000461194 RHPN1Q8TCX5 695 aa8.85□□□□□ -0.99
NUP50-212ENST00000461194 ISCA1Q9BUE6 129 aa8.85□□□□□ -0.99
NUP50-212ENST00000461194 NEUROD4Q9HD90 331 aa8.85□□□□□ -0.99
NUP50-212ENST00000461194 CUEDC1Q9NWM3 386 aaPredicted RBP8.85□□□□□ -0.99
NUP50-212ENST00000461194 RIC1Q4ADV7 1423 aa8.85□□□□□ -0.99
NUP50-212ENST00000461194 ZNF521Q96K83 1311 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 A0A1W2PNR3 127 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 NFKBIEO00221 500 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 VAMP4O75379 141 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 ITGA6P23229 1130 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 ARID4AP29374 1257 aaPredicted RBP8.84□□□□□ -0.99
NUP50-212ENST00000461194 TRIM28Q13263 835 aaKnown RBP8.84□□□□□ -0.99
NUP50-212ENST00000461194 SOGA3Q5TF21 947 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 ANKRD31Q8N7Z5 1873 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 C7orf43Q8WVR3 580 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 COL26A1Q96A83 441 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 KLRG1Q96E93 195 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 ZIC5Q96T25 663 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 STK31Q9BXU1 1019 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 SAP130Q9H0E3 1048 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 MYH16Q9H6N6 1097 aa8.84□□□□□ -0.99
NUP50-212ENST00000461194 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
NUP50-212ENST00000461194 SH3TC1Q8TE82 1336 aa8.83□□□□□ -1
NUP50-212ENST00000461194 DDX58O95786 925 aaKnown RBP8.83□□□□□ -1
NUP50-212ENST00000461194 LMNB1P20700 586 aa8.83□□□□□ -1
NUP50-212ENST00000461194 HOXA10P31260 410 aaPredicted RBP8.83□□□□□ -1
NUP50-212ENST00000461194 PRELPP51888 382 aa8.83□□□□□ -1
NUP50-212ENST00000461194 RASSF7Q02833 373 aa8.83□□□□□ -1
NUP50-212ENST00000461194 EXOSC9Q06265 439 aaKnown RBP8.83□□□□□ -1
NUP50-212ENST00000461194 DBN1Q16643 649 aa8.83□□□□□ -1
NUP50-212ENST00000461194 RTN1Q16799 776 aa8.83□□□□□ -1
NUP50-212ENST00000461194 COX20Q5RI15 118 aa8.83□□□□□ -1
NUP50-212ENST00000461194 VWA5B2Q8N398 1253 aa8.83□□□□□ -1
NUP50-212ENST00000461194 RNF181Q9P0P0 153 aa8.83□□□□□ -1
NUP50-212ENST00000461194 TRMT112Q9UI30 125 aaKnown RBP8.83□□□□□ -1
NUP50-212ENST00000461194 GJA3Q9Y6H8 435 aa8.83□□□□□ -1
NUP50-212ENST00000461194 DLEC1Q9Y238 1755 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms