RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 PPFIA3O75145 1194 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 CALM1P0DP23 149 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 CALM2P0DP24 149 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 CALM3P0DP25 149 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 SHC4Q6S5L8 630 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 ZNF654Q8IZM8 581 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 MPNDQ8N594 471 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 KRI1Q8N9T8 703 aaKnown RBP11.38□□□□□ -0.59
DHFR2-203ENST00000461173 AIFM3Q96NN9 605 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 UBAC1Q9BSL1 405 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 SLC26A6Q9BXS9 759 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 ANKRD2Q9GZV1 360 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 GJB4Q9NTQ9 266 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 RBM28Q9NW13 759 aaKnown RBP11.38□□□□□ -0.59
DHFR2-203ENST00000461173 NARFQ9UHQ1 456 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 CEP131Q9UPN4 1083 aa11.38□□□□□ -0.59
DHFR2-203ENST00000461173 MROH7-TTC4A0A0A0MT08 1334 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 SNAP23O00161 211 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 PRKAB2O43741 272 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 BMP15O95972 392 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 XBP1P17861 261 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 PTPREP23469 700 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 VPS72Q15906 364 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 ERFEQ4G0M1 354 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 RAB11FIP4Q86YS3 637 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 AOPEPQ8N6M6 819 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 LINC00116Q8NCU8 138 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 CACTINQ8WUQ7 758 aaKnown RBP11.37□□□□□ -0.59
DHFR2-203ENST00000461173 FAM84BQ96KN1 310 aaPredicted RBP11.37□□□□□ -0.59
DHFR2-203ENST00000461173 ORC4O43929 436 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 RPS6KA4O75676 772 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 RXRAP19793 462 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 SYCP1Q15431 976 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 DPCR1Q3MIW9 517 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 CCDC144BQ3MJ40 725 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 CT47A1Q5JQC4 288 aaPredicted RBP11.37□□□□□ -0.59
DHFR2-203ENST00000461173 CCDC144CPQ8IYA2 1237 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 CCDC150Q8NCX0 1101 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 NRBP1Q9UHY1 535 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 PAXBP1Q9Y5B6 917 aa11.37□□□□□ -0.59
DHFR2-203ENST00000461173 COL1A1P02452 1464 aaPredicted RBP11.37□□□□□ -0.59
DHFR2-203ENST00000461173 FAM177BA6PVY3 158 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 KIF2AO00139 706 aaPredicted RBP11.36□□□□□ -0.59
DHFR2-203ENST00000461173 DDAH1O94760 285 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 TUBB4AP04350 444 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 NCAPHQ15003 741 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 SBK1Q52WX2 424 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 NT5DC1Q5TFE4 455 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 KANK3Q6NY19 840 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 IQCA1Q86XH1 822 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 DIS3L2Q8IYB7 885 aaKnown RBP11.36□□□□□ -0.59
DHFR2-203ENST00000461173 ATP8A2Q9NTI2 1148 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 RAI14Q9P0K7 980 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 KCNH3Q9ULD8 1083 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 DUOX1Q9NRD9 1551 aa11.36□□□□□ -0.59
DHFR2-203ENST00000461173 CTIFO43310 598 aaKnown RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 PRPF3O43395 683 aaKnown RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 MARCKSP29966 332 aaPredicted RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 RPS8P62241 208 aaKnown RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 LRMPQ12912 555 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 KRBA2Q6ZNG9 492 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 ADGRA1Q86SQ6 560 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 C17orf53Q8N3J3 647 aaPredicted RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 TRIML1Q8N9V2 468 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 MYL10Q9BUA6 226 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 INCENPQ9NQS7 918 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 FAM13BQ9NYF5 915 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 SRPRBQ9Y5M8 271 aaKnown RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 TNKSO95271 1327 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 CBFA2T2O43439 604 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 KCNQ2O43526 872 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 GYG1P46976 350 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 TOB1P50616 345 aaPredicted RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 FUT2Q10981 343 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 CATIPQ7Z7H3 387 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 STK11IPQ8N1F8 1099 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 CNKSR2Q8WXI2 1034 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 NSUN4Q96CB9 384 aaKnown RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 CCDC34Q96HJ3 373 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 NLRP3Q96P20 1036 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 ABCF2Q9UG63 623 aa11.35□□□□□ -0.59
DHFR2-203ENST00000461173 FBXO2Q9UK22 296 aaPredicted RBP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.35□□□□□ -0.59
DHFR2-203ENST00000461173 MAST2Q6P0Q8 1798 aa11.34□□□□□ -0.59
DHFR2-203ENST00000461173 BTBD18B2RXH4 712 aa11.34□□□□□ -0.59
DHFR2-203ENST00000461173 NRDCO43847 1150 aa11.34□□□□□ -0.59
DHFR2-203ENST00000461173 TOM1O60784 492 aa11.34□□□□□ -0.59
DHFR2-203ENST00000461173 GUCY1A2P33402 732 aa11.34□□□□□ -0.59
DHFR2-203ENST00000461173 CCZ1BP86790 482 aa11.34□□□□□ -0.59
DHFR2-203ENST00000461173 CCZ1P86791 482 aaPredicted RBP11.34□□□□□ -0.59
DHFR2-203ENST00000461173 MDM2Q00987 491 aaPredicted RBP11.34□□□□□ -0.59
DHFR2-203ENST00000461173 AKAP17AQ02040 695 aaKnown RBP11.34□□□□□ -0.59
DHFR2-203ENST00000461173 MYL5Q02045 173 aa11.34□□□□□ -0.59
DHFR2-203ENST00000461173 ENAHQ8N8S7 591 aaPredicted RBP11.34□□□□□ -0.59
DHFR2-203ENST00000461173 SETDB2Q96T68 719 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms