RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 NR2E3Q9Y5X4 410 aa27.08■■□□□ 1.93
HMG20B-207ENST00000461099 FAM196BA6NMK8 535 aa27.07■■□□□ 1.92
HMG20B-207ENST00000461099 PI16Q6UXB8 463 aa27.07■■□□□ 1.92
HMG20B-207ENST00000461099 TBC1D9Q6ZT07 1266 aa27.07■■□□□ 1.92
HMG20B-207ENST00000461099 PROCA1Q8NCQ7 364 aaPredicted RBP27.07■■□□□ 1.92
HMG20B-207ENST00000461099 COA7Q96BR5 231 aa27.07■■□□□ 1.92
HMG20B-207ENST00000461099 CAPN2P17655 700 aa27.06■■□□□ 1.92
HMG20B-207ENST00000461099 SPP2Q13103 211 aa27.06■■□□□ 1.92
HMG20B-207ENST00000461099 TFRCP02786 760 aaKnown RBP27.05■■□□□ 1.92
HMG20B-207ENST00000461099 FAM110CQ1W6H9 321 aa27.05■■□□□ 1.92
HMG20B-207ENST00000461099 ZNF280CQ8ND82 737 aa27.05■■□□□ 1.92
HMG20B-207ENST00000461099 RAI14Q9P0K7 980 aa27.05■■□□□ 1.92
HMG20B-207ENST00000461099 ARID4AP29374 1257 aaPredicted RBP27.04■■□□□ 1.92
HMG20B-207ENST00000461099 DEFB118Q96PH6 123 aa27.04■■□□□ 1.92
HMG20B-207ENST00000461099 TBC1D2Q9BYX2 928 aa27.04■■□□□ 1.92
HMG20B-207ENST00000461099 TAOK2Q9UL54 1235 aa27.04■■□□□ 1.92
HMG20B-207ENST00000461099 COL2A1P02458 1487 aaPredicted RBP27.04■■□□□ 1.92
HMG20B-207ENST00000461099 DOCK3Q8IZD9 2030 aa27.04■■□□□ 1.92
HMG20B-207ENST00000461099 ZBTB7BO15156 539 aaPredicted RBP27.03■■□□□ 1.92
HMG20B-207ENST00000461099 CAP2P40123 477 aa27.03■■□□□ 1.92
HMG20B-207ENST00000461099 PRO3102Q9H379 93 aa27.03■■□□□ 1.92
HMG20B-207ENST00000461099 PAK6Q9NQU5 681 aaPredicted RBP27.03■■□□□ 1.92
HMG20B-207ENST00000461099 GNAI2P04899 355 aa27.02■■□□□ 1.92
HMG20B-207ENST00000461099 GCLCP48506 637 aaPredicted RBP27.02■■□□□ 1.92
HMG20B-207ENST00000461099 TEX11Q8IYF3 940 aa27.02■■□□□ 1.92
HMG20B-207ENST00000461099 USP17L5A8MUK1 530 aa27.01■■□□□ 1.91
HMG20B-207ENST00000461099 IPO8O15397 1037 aaKnown RBP27.01■■□□□ 1.91
HMG20B-207ENST00000461099 UQCRFS1P1P0C7P4 283 aa27.01■■□□□ 1.91
HMG20B-207ENST00000461099 MCAMP43121 646 aa27.01■■□□□ 1.91
HMG20B-207ENST00000461099 HMGCS2P54868 508 aa27.01■■□□□ 1.91
HMG20B-207ENST00000461099 G3BP1Q13283 466 aaKnown RBP eCLIP27.01■■□□□ 1.91
HMG20B-207ENST00000461099 PABPC4Q13310 644 aaKnown RBP eCLIP27.01■■□□□ 1.91
HMG20B-207ENST00000461099 RRP1BQ14684 758 aaKnown RBP27.01■■□□□ 1.91
HMG20B-207ENST00000461099 CRISPLD2Q9H0B8 497 aa27.01■■□□□ 1.91
HMG20B-207ENST00000461099 LRP2BPQ9P2M1 347 aa27.01■■□□□ 1.91
HMG20B-207ENST00000461099 HERC5Q9UII4 1024 aaKnown RBP27.01■■□□□ 1.91
HMG20B-207ENST00000461099 LOC285556D6RIA3 1793 aa26.99■■□□□ 1.91
HMG20B-207ENST00000461099 PNMA6EA0A0J9YXQ4 647 aa26.99■■□□□ 1.91
HMG20B-207ENST00000461099 EVI5O60447 810 aa26.99■■□□□ 1.91
HMG20B-207ENST00000461099 TRIM27P14373 513 aa26.99■■□□□ 1.91
HMG20B-207ENST00000461099 SH3D19Q5HYK7 790 aa26.99■■□□□ 1.91
HMG20B-207ENST00000461099 SH3RF3Q8TEJ3 882 aaPredicted RBP26.99■■□□□ 1.91
HMG20B-207ENST00000461099 NOL10Q9BSC4 688 aaKnown RBP26.99■■□□□ 1.91
HMG20B-207ENST00000461099 ASCC2Q9H1I8 757 aaPredicted RBP26.99■■□□□ 1.91
HMG20B-207ENST00000461099 PI4KBQ9UBF8 816 aa26.99■■□□□ 1.91
HMG20B-207ENST00000461099 ATAD5Q96QE3 1844 aa26.99■■□□□ 1.91
HMG20B-207ENST00000461099 AS3MTQ9HBK9 375 aa26.98■■□□□ 1.91
HMG20B-207ENST00000461099 ATF7IPQ6VMQ6 1270 aa26.97■■□□□ 1.91
HMG20B-207ENST00000461099 DHX36Q9H2U1 1008 aaKnown RBP26.97■■□□□ 1.91
HMG20B-207ENST00000461099 GJD2Q9UKL4 321 aa26.97■■□□□ 1.91
HMG20B-207ENST00000461099 PAWRQ96IZ0 340 aaKnown RBP26.96■■□□□ 1.91
HMG20B-207ENST00000461099 WDR18Q9BV38 432 aa26.96■■□□□ 1.91
HMG20B-207ENST00000461099 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.96■■□□□ 1.91
HMG20B-207ENST00000461099 TNNQ9UQP3 1299 aa26.96■■□□□ 1.91
HMG20B-207ENST00000461099 BAG3O95817 575 aa26.95■■□□□ 1.9
HMG20B-207ENST00000461099 HMGCRP04035 888 aa26.95■■□□□ 1.9
HMG20B-207ENST00000461099 PLCG2P16885 1265 aa26.95■■□□□ 1.9
HMG20B-207ENST00000461099 NAA16Q6N069 864 aaPredicted RBP26.95■■□□□ 1.9
HMG20B-207ENST00000461099 FRAT1Q92837 279 aaPredicted RBP26.95■■□□□ 1.9
HMG20B-207ENST00000461099 AATFQ9NY61 560 aaKnown RBP eCLIP26.95■■□□□ 1.9
HMG20B-207ENST00000461099 NECAB2Q7Z6G3 386 aa26.94■■□□□ 1.9
HMG20B-207ENST00000461099 SNRKQ9NRH2 765 aa26.94■■□□□ 1.9
HMG20B-207ENST00000461099 BCAR3O75815 825 aa26.93■■□□□ 1.9
HMG20B-207ENST00000461099 ASNSP08243 561 aa26.93■■□□□ 1.9
HMG20B-207ENST00000461099 BACE1P56817 501 aa26.93■■□□□ 1.9
HMG20B-207ENST00000461099 PPP4CP60510 307 aa26.93■■□□□ 1.9
HMG20B-207ENST00000461099 TGFBRAP1Q8WUH2 860 aa26.93■■□□□ 1.9
HMG20B-207ENST00000461099 CLUAP1Q96AJ1 413 aa26.93■■□□□ 1.9
HMG20B-207ENST00000461099 GPR108Q9NPR9 543 aa26.93■■□□□ 1.9
HMG20B-207ENST00000461099 MORF4L1Q9UBU8 362 aa26.93■■□□□ 1.9
HMG20B-207ENST00000461099 RPTORQ8N122 1335 aa26.92■■□□□ 1.9
HMG20B-207ENST00000461099 A0A1W2PPC1 479 aa26.92■■□□□ 1.9
HMG20B-207ENST00000461099 MTMR2Q13614 643 aa26.92■■□□□ 1.9
HMG20B-207ENST00000461099 CCDC158Q5M9N0 1113 aa26.92■■□□□ 1.9
HMG20B-207ENST00000461099 TTC39AQ5SRH9 613 aa26.92■■□□□ 1.9
HMG20B-207ENST00000461099 METTL16Q86W50 562 aaKnown RBP26.92■■□□□ 1.9
HMG20B-207ENST00000461099 ANKLE1Q8NAG6 615 aa26.92■■□□□ 1.9
HMG20B-207ENST00000461099 DIS3LQ8TF46 1054 aaKnown RBP26.92■■□□□ 1.9
HMG20B-207ENST00000461099 TMOD4Q9NZQ9 345 aa26.92■■□□□ 1.9
HMG20B-207ENST00000461099 HOXA7P31268 230 aaPredicted RBP26.91■■□□□ 1.9
HMG20B-207ENST00000461099 IRX3P78415 501 aaPredicted RBP26.91■■□□□ 1.9
HMG20B-207ENST00000461099 FOXP4Q8IVH2 680 aaPredicted RBP26.91■■□□□ 1.9
HMG20B-207ENST00000461099 MAPKAPK5Q8IW41 473 aa26.91■■□□□ 1.9
HMG20B-207ENST00000461099 HMX1Q9NP08 348 aaPredicted RBP26.91■■□□□ 1.9
HMG20B-207ENST00000461099 SIPA1L1O43166 1804 aa26.9■■□□□ 1.9
HMG20B-207ENST00000461099 CYP2E1P05181 493 aaPredicted RBP26.9■■□□□ 1.9
HMG20B-207ENST00000461099 JAG1P78504 1218 aa26.9■■□□□ 1.9
HMG20B-207ENST00000461099 TNNI3KQ59H18 835 aa26.9■■□□□ 1.9
HMG20B-207ENST00000461099 P2RX7Q99572 595 aaKnown RBP26.9■■□□□ 1.9
HMG20B-207ENST00000461099 DBNDD2Q9BQY9 259 aa26.9■■□□□ 1.9
HMG20B-207ENST00000461099 DNAJC18Q9H819 358 aa26.9■■□□□ 1.9
HMG20B-207ENST00000461099 STAP2Q9UGK3 403 aa26.9■■□□□ 1.9
HMG20B-207ENST00000461099 FPGT-TNNI3KV9GXZ4 949 aa26.9■■□□□ 1.9
HMG20B-207ENST00000461099 FLT1P17948 1338 aa26.9■■□□□ 1.9
HMG20B-207ENST00000461099 LAMA3Q16787 3333 aa26.89■■□□□ 1.9
HMG20B-207ENST00000461099 C19orf81C9J6K1 198 aa26.89■■□□□ 1.9
HMG20B-207ENST00000461099 CCER2I3L3R5 266 aa26.89■■□□□ 1.9
HMG20B-207ENST00000461099 TRIM32Q13049 653 aa26.89■■□□□ 1.9
HMG20B-207ENST00000461099 POLA2Q14181 598 aa26.89■■□□□ 1.9
HMG20B-207ENST00000461099 ADGRA1Q86SQ6 560 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms