RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 SMC3Q9UQE7 1217 aa18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 ZBTB12Q9Y330 459 aaPredicted RBP18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 PCDHAC2Q9Y5I4 1007 aa18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 KLF18A0A0U1RQI7 1052 aa18.62■□□□□ 0.57
PCYT1A-212ENST00000460677 RANBP6O60518 1105 aaKnown RBP18.62■□□□□ 0.57
PCYT1A-212ENST00000460677 PRELPP51888 382 aa18.62■□□□□ 0.57
PCYT1A-212ENST00000460677 NUCB2P80303 420 aa18.62■□□□□ 0.57
PCYT1A-212ENST00000460677 SLC4A8Q2Y0W8 1093 aa18.62■□□□□ 0.57
PCYT1A-212ENST00000460677 SGMS1Q86VZ5 419 aa18.62■□□□□ 0.57
PCYT1A-212ENST00000460677 OGFOD1Q8N543 542 aa18.62■□□□□ 0.57
PCYT1A-212ENST00000460677 CHMP4CQ96CF2 233 aa18.62■□□□□ 0.57
PCYT1A-212ENST00000460677 LY9Q9HBG7 655 aa18.62■□□□□ 0.57
PCYT1A-212ENST00000460677 BRPF3Q9ULD4 1205 aa18.62■□□□□ 0.57
PCYT1A-212ENST00000460677 ECM29Q5VYK3 1845 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 ERICH2A1L162 156 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 FZD9O00144 591 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 NPM3O75607 178 aaKnown RBP18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 SCRN1Q12765 414 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 TTC6Q86TZ1 520 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 TMTC2Q8N394 836 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 DYNLL2Q96FJ2 89 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 UBAC1Q9BSL1 405 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 IDI2Q9BXS1 227 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 OSBPL5Q9H0X9 879 aaPredicted RBP18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 ZNF287Q9HBT7 754 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 NAP1L2Q9ULW6 460 aaPredicted RBP18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 MYH1P12882 1939 aa18.61■□□□□ 0.57
PCYT1A-212ENST00000460677 MMP14P50281 582 aa18.6■□□□□ 0.57
PCYT1A-212ENST00000460677 WTAPQ15007 396 aa18.6■□□□□ 0.57
PCYT1A-212ENST00000460677 RAB3GAP1Q15042 981 aa18.6■□□□□ 0.57
PCYT1A-212ENST00000460677 ARHGAP27Q6ZUM4 889 aa18.6■□□□□ 0.57
PCYT1A-212ENST00000460677 C16orf86Q6ZW13 317 aa18.6■□□□□ 0.57
PCYT1A-212ENST00000460677 IQCA1Q86XH1 822 aa18.6■□□□□ 0.57
PCYT1A-212ENST00000460677 ZKSCAN3Q9BRR0 538 aa18.6■□□□□ 0.57
PCYT1A-212ENST00000460677 SPDYE2BA6NHP3 402 aa18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 SPDYE6P0CI01 402 aa18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 RPS12P25398 132 aaKnown RBP18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 GJB2P29033 226 aa18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 EIF6P56537 245 aaKnown RBP18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 NFIAQ12857 509 aa18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 DLGAP5Q15398 846 aa18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 NFXL1Q6ZNB6 911 aa18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 MTMR14Q8NCE2 650 aa18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 PRMT6Q96LA8 375 aaPredicted RBP18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 ZSCAN10Q96SZ4 725 aaPredicted RBP18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 LLPHQ9BRT6 129 aaKnown RBP18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 MKNK2Q9HBH9 465 aa18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 SENP2Q9HC62 589 aa18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 TNKSO95271 1327 aa18.59■□□□□ 0.57
PCYT1A-212ENST00000460677 CCDC69A6NI79 296 aa18.58■□□□□ 0.57
PCYT1A-212ENST00000460677 GOLGA8BA8MQT2 603 aa18.58■□□□□ 0.57
PCYT1A-212ENST00000460677 CDK8P49336 464 aa18.58■□□□□ 0.57
PCYT1A-212ENST00000460677 CCT2P78371 535 aaKnown RBP18.58■□□□□ 0.57
PCYT1A-212ENST00000460677 SEC23AQ15436 765 aa18.58■□□□□ 0.57
PCYT1A-212ENST00000460677 APOA5Q6Q788 366 aa18.58■□□□□ 0.57
PCYT1A-212ENST00000460677 TDRD3Q9H7E2 651 aaKnown RBP18.58■□□□□ 0.57
PCYT1A-212ENST00000460677 FAM198AQ9UFP1 575 aa18.58■□□□□ 0.57
PCYT1A-212ENST00000460677 HPS5Q9UPZ3 1129 aa18.58■□□□□ 0.57
PCYT1A-212ENST00000460677 TSPY2A6NKD2 308 aa18.57■□□□□ 0.56
PCYT1A-212ENST00000460677 FAM47AQ5JRC9 791 aa18.57■□□□□ 0.56
PCYT1A-212ENST00000460677 ZNF444Q8N0Y2 327 aaPredicted RBP18.57■□□□□ 0.56
PCYT1A-212ENST00000460677 DHX36Q9H2U1 1008 aaKnown RBP18.57■□□□□ 0.56
PCYT1A-212ENST00000460677 DHX16O60231 1041 aaKnown RBP18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 ENTPD3O75355 529 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 LMNB1P20700 586 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 RASA1P20936 1047 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 CACNB3P54284 484 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 TFAP4Q01664 338 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 GABPAQ06546 454 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 SYNE3Q6ZMZ3 975 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 ENAHQ8N8S7 591 aaPredicted RBP18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 SLC44A5Q8NCS7 719 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 NCOA5Q9HCD5 579 aaKnown RBP18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 TMOD2Q9NZR1 351 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 SLC12A7Q9Y666 1083 aa18.56■□□□□ 0.56
PCYT1A-212ENST00000460677 ZBTB43O43298 467 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 METAP2P50579 478 aaKnown RBP eCLIP18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 ZNF280AP59817 542 aaPredicted RBP18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 PKP1Q13835 747 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 CCDC178Q5BJE1 867 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 ZFPM1Q8IX07 1006 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 NSUN7Q8NE18 718 aaKnown RBP18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 SMARCC2Q8TAQ2 1214 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 DPF2Q92785 391 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 ZBED3Q96IU2 234 aaPredicted RBP18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 ZNF70Q9UC06 446 aaPredicted RBP18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 SERPINB13Q9UIV8 391 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 CTDNEP1O95476 244 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 BRD1O95696 1058 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 PDIA4P13667 645 aaKnown RBP18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 RCAN1P53805 252 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 TCP10Q12799 353 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 IFIT1BQ5T764 474 aaKnown RBP18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 TNPO1Q92973 898 aaKnown RBP18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 EHD4Q9H223 541 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 TCP11L1Q9NUJ3 509 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 SWAP70Q9UH65 585 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 TAOK2Q9UL54 1235 aa18.55■□□□□ 0.56
PCYT1A-212ENST00000460677 ZDHHC9Q9Y397 364 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms