RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 ZNF213O14771 459 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 EGFRP00533 1210 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 FKBP1BP68106 108 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 PDE4BQ07343 736 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 TCP10Q12799 353 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 SBK1Q52WX2 424 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 CSRNP1Q96S65 589 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 SWAP70Q9UH65 585 aa13.11□□□□□ -0.31
SMNDC1-203ENST00000460483 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 ATRNL1Q5VV63 1379 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 AKAP11Q9UKA4 1901 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 UNCXA6NJT0 531 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 GSG1L2A8MUP6 293 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 TRDNQ13061 729 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 IER5LQ5T953 404 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 SDR42E1Q8WUS8 393 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 EHD4Q9H223 541 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 SERPINB13Q9UIV8 391 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 PSME4Q14997 1843 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 SCN9AQ15858 1988 aa13.1□□□□□ -0.31
SMNDC1-203ENST00000460483 MAST2Q6P0Q8 1798 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 MYH13Q9UKX3 1938 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 MINDY4BA8MYZ0 360 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 USP17L12C9JPN9 530 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 USP17L21D6R901 530 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 TBC1D12O60347 775 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 FGAP02671 866 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 CACNB3P54284 484 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 NFIAQ12857 509 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 KRT32Q14532 448 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 ARMC9Q7Z3E5 817 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 ZNF589Q86UQ0 364 aaPredicted RBP13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 USP48Q86UV5 1035 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 MAP4K1Q92918 833 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 CNNM2Q9H8M5 875 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 GINM1Q9NU53 330 aa13.09□□□□□ -0.31
SMNDC1-203ENST00000460483 KIF3CO14782 793 aa13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 IREB2P48200 963 aaKnown RBP13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 SLFNL1Q499Z3 407 aa13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 C12orf60Q5U649 245 aa13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 CCDC129Q6ZRS4 1044 aa13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 C2orf69Q8N8R5 385 aa13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 CCDC17Q96LX7 622 aa13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 ZNF341Q9BYN7 854 aa13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 MKNK2Q9HBH9 465 aa13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 PCDHAC2Q9Y5I4 1007 aa13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 CCDC88AQ3V6T2 1871 aa13.08□□□□□ -0.32
SMNDC1-203ENST00000460483 PRKAB2O43741 272 aa13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 CHGBP05060 677 aa13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 PPARAQ07869 468 aa13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 CTR9Q6PD62 1173 aa13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 MFSD6Q6ZSS7 791 aa13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 ZNF444Q8N0Y2 327 aaPredicted RBP13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 TMEM39BQ9GZU3 492 aa13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 CABP5Q9NP86 173 aa13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 MKRN1Q9UHC7 482 aaKnown RBP13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 SAP30BPQ9UHR5 308 aaKnown RBP13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
SMNDC1-203ENST00000460483 HMGB1P09429 215 aaKnown RBP13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 PYGBP11216 843 aa13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 PSMA5P28066 241 aa13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 CCDC178Q5BJE1 867 aa13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 RALYLQ86SE5 291 aaKnown RBP13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 CDCA5Q96FF9 252 aa13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 GLIS2Q9BZE0 524 aaPredicted RBP13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 KRT23Q9C075 422 aa13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 DDX4Q9NQI0 724 aaKnown RBP13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 RBM8AQ9Y5S9 174 aaKnown RBP13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 DOCK2Q92608 1830 aa13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 CNTNAP1P78357 1384 aa13.06□□□□□ -0.32
SMNDC1-203ENST00000460483 VPS53Q5VIR6 699 aa13.05□□□□□ -0.32
SMNDC1-203ENST00000460483 METTL16Q86W50 562 aaKnown RBP13.05□□□□□ -0.32
SMNDC1-203ENST00000460483 ESR2Q92731 530 aa13.05□□□□□ -0.32
SMNDC1-203ENST00000460483 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
SMNDC1-203ENST00000460483 LSG1Q9H089 658 aaKnown RBP13.05□□□□□ -0.32
SMNDC1-203ENST00000460483 TOMM22Q9NS69 142 aa13.05□□□□□ -0.32
SMNDC1-203ENST00000460483 CSADQ9Y600 493 aa13.05□□□□□ -0.32
SMNDC1-203ENST00000460483 ASTN2O75129 1339 aaPredicted RBP13.05□□□□□ -0.32
SMNDC1-203ENST00000460483 DDTLA6NHG4 134 aaPredicted RBP13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 ADM5C9JUS6 153 aa13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 CTNND1O60716 968 aaKnown RBP13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 ASNSP08243 561 aa13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 ANAPC15P60006 121 aa13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 MAP3K10Q02779 954 aa13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 SART3Q15020 963 aaKnown RBP13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 NBPF12Q5TAG4 269 aaPredicted RBP13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 C16orf86Q6ZW13 317 aa13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 ANKRD13AQ8IZ07 590 aa13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 TEPSINQ96N21 525 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms