RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 GNAI2P04899 355 aa15.21■□□□□ 0.03
GPNMB-204ENST00000459927 ARID4AP29374 1257 aaPredicted RBP15.21■□□□□ 0.03
GPNMB-204ENST00000459927 CAP2P40123 477 aa15.21■□□□□ 0.03
GPNMB-204ENST00000459927 PROCA1Q8NCQ7 364 aaPredicted RBP15.21■□□□□ 0.03
GPNMB-204ENST00000459927 ZNF280CQ8ND82 737 aa15.21■□□□□ 0.03
GPNMB-204ENST00000459927 COA7Q96BR5 231 aa15.21■□□□□ 0.03
GPNMB-204ENST00000459927 RAI14Q9P0K7 980 aa15.21■□□□□ 0.03
GPNMB-204ENST00000459927 RBM27Q9P2N5 1060 aaKnown RBP15.21■□□□□ 0.03
GPNMB-204ENST00000459927 NR2E3Q9Y5X4 410 aa15.21■□□□□ 0.03
GPNMB-204ENST00000459927 UQCRFS1P1P0C7P4 283 aa15.2■□□□□ 0.02
GPNMB-204ENST00000459927 DEFB118Q96PH6 123 aa15.2■□□□□ 0.02
GPNMB-204ENST00000459927 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
GPNMB-204ENST00000459927 LRP2BPQ9P2M1 347 aa15.2■□□□□ 0.02
GPNMB-204ENST00000459927 GJD2Q9UKL4 321 aa15.2■□□□□ 0.02
GPNMB-204ENST00000459927 TNNQ9UQP3 1299 aa15.2■□□□□ 0.02
GPNMB-204ENST00000459927 USP17L5A8MUK1 530 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 BCAR3O75815 825 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 INHAP05111 366 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 TRIM27P14373 513 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 MCAMP43121 646 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 GCLCP48506 637 aaPredicted RBP15.19■□□□□ 0.02
GPNMB-204ENST00000459927 SH3D19Q5HYK7 790 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 ATF7IPQ6VMQ6 1270 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 FOXP4Q8IVH2 680 aaPredicted RBP15.19■□□□□ 0.02
GPNMB-204ENST00000459927 PRO3102Q9H379 93 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 PI4KBQ9UBF8 816 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 PNMA3Q9UL41 463 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 PHIPQ8WWQ0 1821 aa15.19■□□□□ 0.02
GPNMB-204ENST00000459927 TRIOBPQ9H2D6 2365 aa15.18■□□□□ 0.02
GPNMB-204ENST00000459927 ZBTB7BO15156 539 aaPredicted RBP15.18■□□□□ 0.02
GPNMB-204ENST00000459927 FARP2O94887 1054 aaPredicted RBP15.18■□□□□ 0.02
GPNMB-204ENST00000459927 HMGCS2P54868 508 aa15.18■□□□□ 0.02
GPNMB-204ENST00000459927 PPP4CP60510 307 aa15.18■□□□□ 0.02
GPNMB-204ENST00000459927 FAM110CQ1W6H9 321 aa15.18■□□□□ 0.02
GPNMB-204ENST00000459927 TEX11Q8IYF3 940 aa15.18■□□□□ 0.02
GPNMB-204ENST00000459927 SH3RF3Q8TEJ3 882 aaPredicted RBP15.18■□□□□ 0.02
GPNMB-204ENST00000459927 FRAT1Q92837 279 aaPredicted RBP15.18■□□□□ 0.02
GPNMB-204ENST00000459927 CRISPLD2Q9H0B8 497 aa15.18■□□□□ 0.02
GPNMB-204ENST00000459927 PAK6Q9NQU5 681 aaPredicted RBP15.18■□□□□ 0.02
GPNMB-204ENST00000459927 HERC5Q9UII4 1024 aaKnown RBP15.18■□□□□ 0.02
GPNMB-204ENST00000459927 DOCK2Q92608 1830 aa15.17■□□□□ 0.02
GPNMB-204ENST00000459927 CCER2I3L3R5 266 aa15.17■□□□□ 0.02
GPNMB-204ENST00000459927 BAG3O95817 575 aa15.17■□□□□ 0.02
GPNMB-204ENST00000459927 ATP8B2P98198 1209 aa15.17■□□□□ 0.02
GPNMB-204ENST00000459927 PABPC4Q13310 644 aaKnown RBP eCLIP15.17■□□□□ 0.02
GPNMB-204ENST00000459927 CLUAP1Q96AJ1 413 aa15.17■□□□□ 0.02
GPNMB-204ENST00000459927 WDR18Q9BV38 432 aa15.17■□□□□ 0.02
GPNMB-204ENST00000459927 ASCC2Q9H1I8 757 aaPredicted RBP15.17■□□□□ 0.02
GPNMB-204ENST00000459927 DHX36Q9H2U1 1008 aaKnown RBP15.17■□□□□ 0.02
GPNMB-204ENST00000459927 GPR108Q9NPR9 543 aa15.17■□□□□ 0.02
GPNMB-204ENST00000459927 SNRKQ9NRH2 765 aa15.17■□□□□ 0.02
GPNMB-204ENST00000459927 TAOK2Q9UL54 1235 aa15.17■□□□□ 0.02
GPNMB-204ENST00000459927 PTPRFP10586 1907 aa15.17■□□□□ 0.02
GPNMB-204ENST00000459927 EVI5O60447 810 aa15.16■□□□□ 0.02
GPNMB-204ENST00000459927 JAG1P78504 1218 aa15.16■□□□□ 0.02
GPNMB-204ENST00000459927 NAA16Q6N069 864 aaPredicted RBP15.16■□□□□ 0.02
GPNMB-204ENST00000459927 METTL16Q86W50 562 aaKnown RBP15.16■□□□□ 0.02
GPNMB-204ENST00000459927 PAWRQ96IZ0 340 aaKnown RBP15.16■□□□□ 0.02
GPNMB-204ENST00000459927 P2RX7Q99572 595 aaKnown RBP15.16■□□□□ 0.02
GPNMB-204ENST00000459927 AS3MTQ9HBK9 375 aa15.16■□□□□ 0.02
GPNMB-204ENST00000459927 AATFQ9NY61 560 aaKnown RBP eCLIP15.16■□□□□ 0.02
GPNMB-204ENST00000459927 CYP2E1P05181 493 aaPredicted RBP15.15■□□□□ 0.02
GPNMB-204ENST00000459927 HOXA7P31268 230 aaPredicted RBP15.15■□□□□ 0.02
GPNMB-204ENST00000459927 BACE1P56817 501 aa15.15■□□□□ 0.02
GPNMB-204ENST00000459927 POLA2Q14181 598 aa15.15■□□□□ 0.02
GPNMB-204ENST00000459927 CCDC158Q5M9N0 1113 aa15.15■□□□□ 0.02
GPNMB-204ENST00000459927 SSH3Q8TE77 659 aa15.15■□□□□ 0.02
GPNMB-204ENST00000459927 TGFBRAP1Q8WUH2 860 aa15.15■□□□□ 0.02
GPNMB-204ENST00000459927 NOL10Q9BSC4 688 aaKnown RBP15.15■□□□□ 0.02
GPNMB-204ENST00000459927 DOCK1Q14185 1865 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 C19orf81C9J6K1 198 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 PLCG2P16885 1265 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 TNNI3KQ59H18 835 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 TTC39AQ5SRH9 613 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 TMEM57Q8N5G2 664 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 ZNF512BQ96KM6 892 aaPredicted RBP15.14■□□□□ 0.01
GPNMB-204ENST00000459927 DBNDD2Q9BQY9 259 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 MORF4L1Q9UBU8 362 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 PALD1Q9ULE6 856 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 FPGT-TNNI3KV9GXZ4 949 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 SZT2Q5T011 3432 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 RPTORQ8N122 1335 aa15.14■□□□□ 0.01
GPNMB-204ENST00000459927 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
GPNMB-204ENST00000459927 IGSF3O75054 1194 aa15.13■□□□□ 0.01
GPNMB-204ENST00000459927 SURF6O75683 361 aaKnown RBP15.13■□□□□ 0.01
GPNMB-204ENST00000459927 ASNSP08243 561 aa15.13■□□□□ 0.01
GPNMB-204ENST00000459927 TRIM32Q13049 653 aa15.13■□□□□ 0.01
GPNMB-204ENST00000459927 Q3C1V9 767 aa15.13■□□□□ 0.01
GPNMB-204ENST00000459927 NECAB2Q7Z6G3 386 aa15.13■□□□□ 0.01
GPNMB-204ENST00000459927 ADGRA1Q86SQ6 560 aa15.13■□□□□ 0.01
GPNMB-204ENST00000459927 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
GPNMB-204ENST00000459927 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.13■□□□□ 0.01
GPNMB-204ENST00000459927 HMX1Q9NP08 348 aaPredicted RBP15.13■□□□□ 0.01
GPNMB-204ENST00000459927 GINM1Q9NU53 330 aa15.13■□□□□ 0.01
GPNMB-204ENST00000459927 RBPJLQ9UBG7 517 aa15.13■□□□□ 0.01
GPNMB-204ENST00000459927 STAP2Q9UGK3 403 aa15.13■□□□□ 0.01
GPNMB-204ENST00000459927 USP17L10C9JJH3 530 aa15.12■□□□□ 0.01
GPNMB-204ENST00000459927 PEX10O60683 326 aa15.12■□□□□ 0.01
GPNMB-204ENST00000459927 HMGCRP04035 888 aa15.12■□□□□ 0.01
GPNMB-204ENST00000459927 ZKSCAN2Q63HK3 967 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms