RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 NBPF11Q86T75 865 aa19.31■□□□□ 0.68
CCDC43-202ENST00000457422 TRIM22Q8IYM9 498 aa19.31■□□□□ 0.68
CCDC43-202ENST00000457422 NSUN4Q96CB9 384 aaKnown RBP19.31■□□□□ 0.68
CCDC43-202ENST00000457422 MAP3K14Q99558 947 aa19.31■□□□□ 0.68
CCDC43-202ENST00000457422 UBAC1Q9BSL1 405 aa19.31■□□□□ 0.68
CCDC43-202ENST00000457422 TFCP2L1Q9NZI6 479 aa19.31■□□□□ 0.68
CCDC43-202ENST00000457422 MYH6P13533 1939 aa19.31■□□□□ 0.68
CCDC43-202ENST00000457422 TM4SF1P30408 202 aa19.31■□□□□ 0.68
CCDC43-202ENST00000457422 ZNF654Q8IZM8 581 aa19.31■□□□□ 0.68
CCDC43-202ENST00000457422 SDF4Q9BRK5 362 aa19.31■□□□□ 0.68
CCDC43-202ENST00000457422 FAM237AA0A1B0GTK4 181 aa19.3■□□□□ 0.68
CCDC43-202ENST00000457422 GOLGA6L19H0YKK7 550 aa19.3■□□□□ 0.68
CCDC43-202ENST00000457422 CDC25BP30305 580 aa19.3■□□□□ 0.68
CCDC43-202ENST00000457422 HIBADHP31937 336 aaKnown RBP19.3■□□□□ 0.68
CCDC43-202ENST00000457422 TRIM5Q9C035 493 aa19.3■□□□□ 0.68
CCDC43-202ENST00000457422 KCNF1Q9H3M0 494 aa19.3■□□□□ 0.68
CCDC43-202ENST00000457422 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.3■□□□□ 0.68
CCDC43-202ENST00000457422 KIAA1468Q9P260 1216 aa19.3■□□□□ 0.68
CCDC43-202ENST00000457422 MROH7-TTC4A0A0A0MT08 1334 aa19.3■□□□□ 0.68
CCDC43-202ENST00000457422 A0A087WWV3 80 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 CYP2D7A0A087X1C5 515 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 WDHD1O75717 1129 aaPredicted RBP19.29■□□□□ 0.68
CCDC43-202ENST00000457422 ZNF202O95125 648 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 DEXIO95424 95 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 MMP1P03956 469 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 GUCY1A2P33402 732 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 CEP57L1Q8IYX8 460 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 CRACR2BQ8N4Y2 399 aaPredicted RBP19.29■□□□□ 0.68
CCDC43-202ENST00000457422 FANCBQ8NB91 859 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 ERCC4Q92889 916 aaPredicted RBP19.29■□□□□ 0.68
CCDC43-202ENST00000457422 TIGD1Q96MW7 591 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 SPTLC3Q9NUV7 552 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 TNKSO95271 1327 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 IRS2Q9Y4H2 1338 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 PFKFB1P16118 471 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 MARCKSP29966 332 aaPredicted RBP19.29■□□□□ 0.68
CCDC43-202ENST00000457422 NOLC1Q14978 699 aaKnown RBP eCLIP19.29■□□□□ 0.68
CCDC43-202ENST00000457422 HPSEQ9Y251 543 aa19.29■□□□□ 0.68
CCDC43-202ENST00000457422 IGSF3O75054 1194 aa19.28■□□□□ 0.68
CCDC43-202ENST00000457422 MECOMQ03112 1051 aa19.28■□□□□ 0.68
CCDC43-202ENST00000457422 CHAF1AQ13111 956 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-202ENST00000457422 NOSTRINQ8IVI9 506 aa19.28■□□□□ 0.68
CCDC43-202ENST00000457422 DHX40Q8IX18 779 aaKnown RBP19.28■□□□□ 0.68
CCDC43-202ENST00000457422 NAT10Q9H0A0 1025 aaKnown RBP19.28■□□□□ 0.68
CCDC43-202ENST00000457422 NUP133Q8WUM0 1156 aa19.28■□□□□ 0.68
CCDC43-202ENST00000457422 ZSCAN10Q96SZ4 725 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-202ENST00000457422 FOXP1Q9H334 677 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-202ENST00000457422 SAFBQ15424 915 aaKnown RBP eCLIP19.27■□□□□ 0.68
CCDC43-202ENST00000457422 CTR9Q6PD62 1173 aa19.27■□□□□ 0.68
CCDC43-202ENST00000457422 CMTR1Q8N1G2 835 aaKnown RBP19.27■□□□□ 0.68
CCDC43-202ENST00000457422 KIAA1524Q8TCG1 905 aa19.27■□□□□ 0.68
CCDC43-202ENST00000457422 BPIFA3Q9BQP9 254 aa19.27■□□□□ 0.68
CCDC43-202ENST00000457422 RNF26Q9BY78 433 aaPredicted RBP19.27■□□□□ 0.68
CCDC43-202ENST00000457422 R3HCC1Q9Y3T6 440 aaKnown RBP19.27■□□□□ 0.68
CCDC43-202ENST00000457422 NPHP1O15259 732 aa19.26■□□□□ 0.67
CCDC43-202ENST00000457422 RFC4P35249 363 aa19.26■□□□□ 0.67
CCDC43-202ENST00000457422 RBM6P78332 1123 aaKnown RBP19.26■□□□□ 0.67
CCDC43-202ENST00000457422 ENAHQ8N8S7 591 aaPredicted RBP19.26■□□□□ 0.67
CCDC43-202ENST00000457422 MRFAP1L1Q96HT8 127 aa19.26■□□□□ 0.67
CCDC43-202ENST00000457422 BECN2A8MW95 431 aa19.26■□□□□ 0.67
CCDC43-202ENST00000457422 CUTAO60888 179 aa19.26■□□□□ 0.67
CCDC43-202ENST00000457422 SLC3A2P08195 630 aaKnown RBP19.26■□□□□ 0.67
CCDC43-202ENST00000457422 PRDX5P30044 214 aa19.26■□□□□ 0.67
CCDC43-202ENST00000457422 TXNRD3Q86VQ6 643 aa19.26■□□□□ 0.67
CCDC43-202ENST00000457422 DIS3L2Q8IYB7 885 aaKnown RBP19.26■□□□□ 0.67
CCDC43-202ENST00000457422 CCDC82Q8N4S0 544 aa19.26■□□□□ 0.67
CCDC43-202ENST00000457422 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.26■□□□□ 0.67
CCDC43-202ENST00000457422 ORC4O43929 436 aa19.25■□□□□ 0.67
CCDC43-202ENST00000457422 TRAPPC3LQ5T215 181 aa19.25■□□□□ 0.67
CCDC43-202ENST00000457422 RESP18Q5W5W9 173 aa19.25■□□□□ 0.67
CCDC43-202ENST00000457422 SHC4Q6S5L8 630 aa19.25■□□□□ 0.67
CCDC43-202ENST00000457422 SLC51AQ86UW1 340 aa19.25■□□□□ 0.67
CCDC43-202ENST00000457422 C17orf53Q8N3J3 647 aaPredicted RBP19.25■□□□□ 0.67
CCDC43-202ENST00000457422 GJD4Q96KN9 370 aaPredicted RBP19.25■□□□□ 0.67
CCDC43-202ENST00000457422 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
CCDC43-202ENST00000457422 ATP8A2Q9NTI2 1148 aa19.25■□□□□ 0.67
CCDC43-202ENST00000457422 AATFQ9NY61 560 aaKnown RBP eCLIP19.25■□□□□ 0.67
CCDC43-202ENST00000457422 KCNJ14Q9UNX9 436 aa19.25■□□□□ 0.67
CCDC43-202ENST00000457422 BTBD18B2RXH4 712 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 PRDM1O75626 825 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 PTGS1P23219 599 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 SYKP43405 635 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 RILPL1Q5EBL4 403 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 FAM196AQ6ZSG2 479 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 IQCA1Q86XH1 822 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 FBXW7Q969H0 707 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 DCP1AQ9NPI6 582 aaPredicted RBP19.24■□□□□ 0.67
CCDC43-202ENST00000457422 JAG2Q9Y219 1238 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 EVX2Q03828 476 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 NFIXQ14938 502 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 RBM28Q9NW13 759 aaKnown RBP19.24■□□□□ 0.67
CCDC43-202ENST00000457422 PYCARDQ9ULZ3 195 aa19.24■□□□□ 0.67
CCDC43-202ENST00000457422 USP17L12C9JPN9 530 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 USP17L21D6R901 530 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 CALM1P0DP23 149 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 CALM2P0DP24 149 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 CALM3P0DP25 149 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 SBK1Q52WX2 424 aa19.23■□□□□ 0.67
CCDC43-202ENST00000457422 IFIT1BQ5T764 474 aaKnown RBP19.23■□□□□ 0.67
CCDC43-202ENST00000457422 MEX3CQ5U5Q3 659 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms