RNA–Protein interactions for RNA: ENST00000457264.5

MRPL55-222, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-222ENST00000457264 ZNF384Q8TF68 577 aa20.61■□□□□ 0.89
MRPL55-222ENST00000457264 NSUN4Q96CB9 384 aaKnown RBP20.61■□□□□ 0.89
MRPL55-222ENST00000457264 TBC1D2Q9BYX2 928 aa20.61■□□□□ 0.89
MRPL55-222ENST00000457264 MYH13Q9UKX3 1938 aa20.61■□□□□ 0.89
MRPL55-222ENST00000457264 EVI5O60447 810 aa20.6■□□□□ 0.89
MRPL55-222ENST00000457264 GCLCP48506 637 aaPredicted RBP20.6■□□□□ 0.89
MRPL55-222ENST00000457264 PI16Q6UXB8 463 aa20.6■□□□□ 0.89
MRPL55-222ENST00000457264 LRP2BPQ9P2M1 347 aa20.6■□□□□ 0.89
MRPL55-222ENST00000457264 CEP290O15078 2479 aa20.6■□□□□ 0.89
MRPL55-222ENST00000457264 ZBTB7BO15156 539 aaPredicted RBP20.59■□□□□ 0.89
MRPL55-222ENST00000457264 IPO8O15397 1037 aaKnown RBP20.59■□□□□ 0.89
MRPL55-222ENST00000457264 CAP2P40123 477 aa20.59■□□□□ 0.89
MRPL55-222ENST00000457264 G3BP1Q13283 466 aaKnown RBP eCLIP20.59■□□□□ 0.89
MRPL55-222ENST00000457264 NOL10Q9BSC4 688 aaKnown RBP20.59■□□□□ 0.89
MRPL55-222ENST00000457264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.59■□□□□ 0.89
MRPL55-222ENST00000457264 USP17L5A8MUK1 530 aa20.58■□□□□ 0.89
MRPL55-222ENST00000457264 ARID4AP29374 1257 aaPredicted RBP20.58■□□□□ 0.89
MRPL55-222ENST00000457264 HMGCS2P54868 508 aa20.58■□□□□ 0.89
MRPL55-222ENST00000457264 TEX11Q8IYF3 940 aa20.58■□□□□ 0.89
MRPL55-222ENST00000457264 PAK6Q9NQU5 681 aaPredicted RBP20.58■□□□□ 0.89
MRPL55-222ENST00000457264 HERC5Q9UII4 1024 aaKnown RBP20.58■□□□□ 0.89
MRPL55-222ENST00000457264 GNAI2P04899 355 aa20.57■□□□□ 0.88
MRPL55-222ENST00000457264 UQCRFS1P1P0C7P4 283 aa20.57■□□□□ 0.88
MRPL55-222ENST00000457264 AS3MTQ9HBK9 375 aa20.57■□□□□ 0.88
MRPL55-222ENST00000457264 TRIOBPQ9H2D6 2365 aa20.56■□□□□ 0.88
MRPL55-222ENST00000457264 BAG3O95817 575 aa20.56■□□□□ 0.88
MRPL55-222ENST00000457264 CRISPLD2Q9H0B8 497 aa20.56■□□□□ 0.88
MRPL55-222ENST00000457264 ASCC2Q9H1I8 757 aaPredicted RBP20.56■□□□□ 0.88
MRPL55-222ENST00000457264 DHX36Q9H2U1 1008 aaKnown RBP20.56■□□□□ 0.88
MRPL55-222ENST00000457264 PRO3102Q9H379 93 aa20.56■□□□□ 0.88
MRPL55-222ENST00000457264 PI4KBQ9UBF8 816 aa20.56■□□□□ 0.88
MRPL55-222ENST00000457264 MYH2Q9UKX2 1941 aa20.55■□□□□ 0.88
MRPL55-222ENST00000457264 MCAMP43121 646 aa20.55■□□□□ 0.88
MRPL55-222ENST00000457264 SH3RF3Q8TEJ3 882 aaPredicted RBP20.55■□□□□ 0.88
MRPL55-222ENST00000457264 PAWRQ96IZ0 340 aaKnown RBP20.55■□□□□ 0.88
MRPL55-222ENST00000457264 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.55■□□□□ 0.88
MRPL55-222ENST00000457264 HMGCRP04035 888 aa20.54■□□□□ 0.88
MRPL55-222ENST00000457264 PLCG2P16885 1265 aa20.54■□□□□ 0.88
MRPL55-222ENST00000457264 RRP1BQ14684 758 aaKnown RBP20.54■□□□□ 0.88
MRPL55-222ENST00000457264 SH3D19Q5HYK7 790 aa20.54■□□□□ 0.88
MRPL55-222ENST00000457264 NAA16Q6N069 864 aaPredicted RBP20.54■□□□□ 0.88
MRPL55-222ENST00000457264 NECAB2Q7Z6G3 386 aa20.54■□□□□ 0.88
MRPL55-222ENST00000457264 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
MRPL55-222ENST00000457264 DOCK2Q92608 1830 aa20.54■□□□□ 0.88
MRPL55-222ENST00000457264 COL2A1P02458 1487 aaPredicted RBP20.54■□□□□ 0.88
MRPL55-222ENST00000457264 RANBP2P49792 3224 aaKnown RBP20.53■□□□□ 0.88
MRPL55-222ENST00000457264 PNMA6EA0A0J9YXQ4 647 aa20.53■□□□□ 0.88
MRPL55-222ENST00000457264 TRIM27P14373 513 aa20.53■□□□□ 0.88
MRPL55-222ENST00000457264 IRX3P78415 501 aaPredicted RBP20.53■□□□□ 0.88
MRPL55-222ENST00000457264 WDR18Q9BV38 432 aa20.53■□□□□ 0.88
MRPL55-222ENST00000457264 AATFQ9NY61 560 aaKnown RBP eCLIP20.53■□□□□ 0.88
MRPL55-222ENST00000457264 TMOD4Q9NZQ9 345 aa20.53■□□□□ 0.88
MRPL55-222ENST00000457264 A0A1W2PPC1 479 aa20.52■□□□□ 0.88
MRPL55-222ENST00000457264 ASNSP08243 561 aa20.52■□□□□ 0.88
MRPL55-222ENST00000457264 MTMR2Q13614 643 aa20.52■□□□□ 0.88
MRPL55-222ENST00000457264 CCDC158Q5M9N0 1113 aa20.52■□□□□ 0.88
MRPL55-222ENST00000457264 TTC39AQ5SRH9 613 aa20.52■□□□□ 0.88
MRPL55-222ENST00000457264 ATF7IPQ6VMQ6 1270 aa20.52■□□□□ 0.88
MRPL55-222ENST00000457264 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
MRPL55-222ENST00000457264 TRIM34Q9BYJ4 488 aa20.52■□□□□ 0.88
MRPL55-222ENST00000457264 HMX1Q9NP08 348 aaPredicted RBP20.52■□□□□ 0.88
MRPL55-222ENST00000457264 SNRKQ9NRH2 765 aa20.52■□□□□ 0.88
MRPL55-222ENST00000457264 GJD2Q9UKL4 321 aa20.52■□□□□ 0.88
MRPL55-222ENST00000457264 RPTORQ8N122 1335 aa20.52■□□□□ 0.87
MRPL55-222ENST00000457264 BACE1P56817 501 aa20.51■□□□□ 0.87
MRPL55-222ENST00000457264 FOXP4Q8IVH2 680 aaPredicted RBP20.51■□□□□ 0.87
MRPL55-222ENST00000457264 CRACR2BQ8N4Y2 399 aaPredicted RBP20.51■□□□□ 0.87
MRPL55-222ENST00000457264 ANKLE1Q8NAG6 615 aa20.51■□□□□ 0.87
MRPL55-222ENST00000457264 TGFBRAP1Q8WUH2 860 aa20.51■□□□□ 0.87
MRPL55-222ENST00000457264 STAP2Q9UGK3 403 aa20.51■□□□□ 0.87
MRPL55-222ENST00000457264 DOCK1Q14185 1865 aa20.5■□□□□ 0.87
MRPL55-222ENST00000457264 PPP4CP60510 307 aa20.5■□□□□ 0.87
MRPL55-222ENST00000457264 OS9Q13438 667 aaPredicted RBP20.5■□□□□ 0.87
MRPL55-222ENST00000457264 MAPKAPK5Q8IW41 473 aa20.5■□□□□ 0.87
MRPL55-222ENST00000457264 DIS3LQ8TF46 1054 aaKnown RBP20.5■□□□□ 0.87
MRPL55-222ENST00000457264 GPR108Q9NPR9 543 aa20.5■□□□□ 0.87
MRPL55-222ENST00000457264 MORF4L1Q9UBU8 362 aa20.5■□□□□ 0.87
MRPL55-222ENST00000457264 C19orf81C9J6K1 198 aa20.49■□□□□ 0.87
MRPL55-222ENST00000457264 BCAR3O75815 825 aa20.49■□□□□ 0.87
MRPL55-222ENST00000457264 HOXA7P31268 230 aaPredicted RBP20.49■□□□□ 0.87
MRPL55-222ENST00000457264 TNNI3KQ59H18 835 aa20.49■□□□□ 0.87
MRPL55-222ENST00000457264 GPRC5AQ8NFJ5 357 aa20.49■□□□□ 0.87
MRPL55-222ENST00000457264 P2RX7Q99572 595 aaKnown RBP20.49■□□□□ 0.87
MRPL55-222ENST00000457264 NBPF3Q9H094 633 aa20.49■□□□□ 0.87
MRPL55-222ENST00000457264 FPGT-TNNI3KV9GXZ4 949 aa20.49■□□□□ 0.87
MRPL55-222ENST00000457264 USP17L10C9JJH3 530 aa20.48■□□□□ 0.87
MRPL55-222ENST00000457264 CYP2B6P20813 491 aa20.48■□□□□ 0.87
MRPL55-222ENST00000457264 CCAR1Q8IX12 1150 aaKnown RBP20.48■□□□□ 0.87
MRPL55-222ENST00000457264 NUDT12Q9BQG2 462 aa20.48■□□□□ 0.87
MRPL55-222ENST00000457264 GINM1Q9NU53 330 aa20.48■□□□□ 0.87
MRPL55-222ENST00000457264 PALD1Q9ULE6 856 aa20.48■□□□□ 0.87
MRPL55-222ENST00000457264 TNNQ9UQP3 1299 aa20.48■□□□□ 0.87
MRPL55-222ENST00000457264 MGAMO43451 1857 aa20.47■□□□□ 0.87
MRPL55-222ENST00000457264 IGSF3O75054 1194 aa20.47■□□□□ 0.87
MRPL55-222ENST00000457264 CYP2E1P05181 493 aaPredicted RBP20.47■□□□□ 0.87
MRPL55-222ENST00000457264 HERVK_113P62684 666 aa20.47■□□□□ 0.87
MRPL55-222ENST00000457264 TRIM32Q13049 653 aa20.47■□□□□ 0.87
MRPL55-222ENST00000457264 METTL16Q86W50 562 aaKnown RBP20.47■□□□□ 0.87
MRPL55-222ENST00000457264 C7orf61Q8IZ16 206 aa20.47■□□□□ 0.87
MRPL55-222ENST00000457264 DBNDD2Q9BQY9 259 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms