RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 COL2A1P02458 1487 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-215ENST00000456545 IGF2BP3O00425 579 aaKnown RBP eCLIP21.83■■□□□ 1.09
PDLIM2-215ENST00000456545 IRX6P78412 446 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-215ENST00000456545 SLC4A8Q2Y0W8 1093 aa21.83■■□□□ 1.09
PDLIM2-215ENST00000456545 ZHX2Q9Y6X8 837 aa21.83■■□□□ 1.09
PDLIM2-215ENST00000456545 GLRX3O76003 335 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-215ENST00000456545 POLR3DP05423 398 aaPredicted RBP21.82■■□□□ 1.08
PDLIM2-215ENST00000456545 MX1P20591 662 aa21.82■■□□□ 1.08
PDLIM2-215ENST00000456545 LRRFIP1Q32MZ4 808 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-215ENST00000456545 TTC6Q86TZ1 520 aa21.82■■□□□ 1.08
PDLIM2-215ENST00000456545 BRI3BPQ8WY22 251 aa21.82■■□□□ 1.08
PDLIM2-215ENST00000456545 RIOK1Q9BRS2 568 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-215ENST00000456545 TCRBV5S4A2TA0A5A2 114 aa21.81■■□□□ 1.08
PDLIM2-215ENST00000456545 GPR25O00155 361 aa21.81■■□□□ 1.08
PDLIM2-215ENST00000456545 PTPRAP18433 802 aa21.81■■□□□ 1.08
PDLIM2-215ENST00000456545 UBE3CQ15386 1083 aa21.81■■□□□ 1.08
PDLIM2-215ENST00000456545 B4GALNT3Q6L9W6 998 aa21.81■■□□□ 1.08
PDLIM2-215ENST00000456545 PTPN18Q99952 460 aa21.81■■□□□ 1.08
PDLIM2-215ENST00000456545 ARMT1Q9H993 441 aa21.81■■□□□ 1.08
PDLIM2-215ENST00000456545 KBTBD3Q8NAB2 608 aa21.8■■□□□ 1.08
PDLIM2-215ENST00000456545 OTUD7AQ8TE49 926 aaPredicted RBP21.8■■□□□ 1.08
PDLIM2-215ENST00000456545 DDRGK1Q96HY6 314 aa21.8■■□□□ 1.08
PDLIM2-215ENST00000456545 ZFYVE28Q9HCC9 887 aa21.8■■□□□ 1.08
PDLIM2-215ENST00000456545 CDK5RAP2Q96SN8 1893 aa21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 CXCL11O14625 94 aa21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 FKTNO75072 461 aa21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 MBD4O95243 580 aa21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 CAP2P40123 477 aa21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 DGKZQ13574 1117 aa21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 TAF1CQ15572 869 aaPredicted RBP21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 SLFNL1Q499Z3 407 aa21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 LCORLQ8N3X6 602 aa21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 ZNF296Q8WUU4 475 aaPredicted RBP21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 CFHR5Q9BXR6 569 aa21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 MCM9Q9NXL9 1143 aa21.79■■□□□ 1.08
PDLIM2-215ENST00000456545 IFFO2Q5TF58 517 aa21.78■■□□□ 1.08
PDLIM2-215ENST00000456545 KCNH4Q9UQ05 1017 aa21.78■■□□□ 1.08
PDLIM2-215ENST00000456545 MYH1P12882 1939 aa21.78■■□□□ 1.08
PDLIM2-215ENST00000456545 FOCADQ5VW36 1801 aa21.78■■□□□ 1.08
PDLIM2-215ENST00000456545 BTBD19C9JJ37 291 aa21.77■■□□□ 1.08
PDLIM2-215ENST00000456545 IGHDP01880 384 aa21.77■■□□□ 1.08
PDLIM2-215ENST00000456545 ZFYP08048 801 aaPredicted RBP21.77■■□□□ 1.08
PDLIM2-215ENST00000456545 CRHR2Q13324 411 aa21.77■■□□□ 1.08
PDLIM2-215ENST00000456545 AMOTL1Q8IY63 956 aa21.77■■□□□ 1.08
PDLIM2-215ENST00000456545 FAM43AQ8N2R8 423 aa21.77■■□□□ 1.08
PDLIM2-215ENST00000456545 SDR42E1Q8WUS8 393 aa21.77■■□□□ 1.08
PDLIM2-215ENST00000456545 LNPKQ9C0E8 428 aa21.77■■□□□ 1.08
PDLIM2-215ENST00000456545 R3HDMLQ9H3Y0 253 aa21.77■■□□□ 1.08
PDLIM2-215ENST00000456545 SERPINB13Q9UIV8 391 aa21.77■■□□□ 1.08
PDLIM2-215ENST00000456545 TRIM75PA6NK02 468 aa21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 RNF113AO15541 343 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 NOM1Q5C9Z4 860 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 GADL1Q6ZQY3 521 aa21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 FASTKD5Q7L8L6 764 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 SMC5Q8IY18 1101 aa21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 PI4K2BQ8TCG2 481 aa21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 FSD1Q9BTV5 496 aa21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 AS3MTQ9HBK9 375 aa21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 AFG3L2Q9Y4W6 797 aa21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 SLC4A4Q9Y6R1 1079 aa21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 MYH7P12883 1935 aa21.76■■□□□ 1.07
PDLIM2-215ENST00000456545 USP17L5A8MUK1 530 aa21.75■■□□□ 1.07
PDLIM2-215ENST00000456545 CAPN15O75808 1086 aa21.75■■□□□ 1.07
PDLIM2-215ENST00000456545 ASNSP08243 561 aa21.75■■□□□ 1.07
PDLIM2-215ENST00000456545 TBC1D2Q9BYX2 928 aa21.75■■□□□ 1.07
PDLIM2-215ENST00000456545 ZCCHC17Q9NP64 241 aaKnown RBP21.75■■□□□ 1.07
PDLIM2-215ENST00000456545 ATP8A2Q9NTI2 1148 aa21.75■■□□□ 1.07
PDLIM2-215ENST00000456545 DOCK1Q14185 1865 aa21.75■■□□□ 1.07
PDLIM2-215ENST00000456545 LAMB1P07942 1786 aa21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 PRKAB2O43741 272 aa21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 CHGBP05060 677 aa21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 CTU1Q7Z7A3 348 aaKnown RBP21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 ANKRD23Q86SG2 305 aa21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 CCDC84Q86UT8 332 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 METTL16Q86W50 562 aaKnown RBP21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 PUS7LQ9H0K6 701 aaKnown RBP21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 EHD4Q9H223 541 aa21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 DCP1AQ9NPI6 582 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-215ENST00000456545 PDHXO00330 501 aa21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 GDF11O95390 407 aa21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 PLCD1P51178 756 aa21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 PDE1AP54750 535 aa21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 SPP2Q13103 211 aa21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 RRP1BQ14684 758 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 CHD1LQ86WJ1 897 aa21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 ZNF280CQ8ND82 737 aa21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 APPBP2Q92624 585 aa21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 MCOLN1Q9GZU1 580 aa21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 GINM1Q9NU53 330 aa21.73■■□□□ 1.07
PDLIM2-215ENST00000456545 A0A0G2JLL6 359 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-215ENST00000456545 SP3Q02447 781 aa21.72■■□□□ 1.07
PDLIM2-215ENST00000456545 CERKLQ49MI3 558 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-215ENST00000456545 PRRT2Q7Z6L0 340 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-215ENST00000456545 ERO1AQ96HE7 468 aa21.72■■□□□ 1.07
PDLIM2-215ENST00000456545 DNAJC18Q9H819 358 aa21.72■■□□□ 1.07
PDLIM2-215ENST00000456545 CABP5Q9NP86 173 aa21.72■■□□□ 1.07
PDLIM2-215ENST00000456545 STAP2Q9UGK3 403 aa21.72■■□□□ 1.07
PDLIM2-215ENST00000456545 NUCB1Q02818 461 aa21.71■■□□□ 1.07
PDLIM2-215ENST00000456545 TRIM6-TRIM34B2RNG4 842 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms