RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 TNPO2O14787 897 aaKnown RBP14.74□□□□□ -0.05
LMCD1-206ENST00000456506 RARSP54136 660 aaKnown RBP14.74□□□□□ -0.05
LMCD1-206ENST00000456506 SPTY2D1Q68D10 685 aaPredicted RBP14.74□□□□□ -0.05
LMCD1-206ENST00000456506 SLF2Q8IX21 1173 aa14.74□□□□□ -0.05
LMCD1-206ENST00000456506 ANKRD13CQ8N6S4 541 aa14.74□□□□□ -0.05
LMCD1-206ENST00000456506 PROCA1Q8NCQ7 364 aaPredicted RBP14.74□□□□□ -0.05
LMCD1-206ENST00000456506 ARHGAP45Q92619 1136 aa14.74□□□□□ -0.05
LMCD1-206ENST00000456506 PARP14Q460N5 1801 aa14.73□□□□□ -0.05
LMCD1-206ENST00000456506 MYH8P13535 1937 aa14.73□□□□□ -0.05
LMCD1-206ENST00000456506 RLFQ13129 1914 aa14.73□□□□□ -0.05
LMCD1-206ENST00000456506 SRGAP3O43295 1099 aa14.73□□□□□ -0.05
LMCD1-206ENST00000456506 ARID4AP29374 1257 aaPredicted RBP14.73□□□□□ -0.05
LMCD1-206ENST00000456506 MNX1P50219 401 aaPredicted RBP14.73□□□□□ -0.05
LMCD1-206ENST00000456506 MVPQ14764 893 aaKnown RBP14.73□□□□□ -0.05
LMCD1-206ENST00000456506 FAM110CQ1W6H9 321 aa14.73□□□□□ -0.05
LMCD1-206ENST00000456506 TBC1D9Q6ZT07 1266 aa14.73□□□□□ -0.05
LMCD1-206ENST00000456506 ERICH6Q7L0X2 663 aa14.73□□□□□ -0.05
LMCD1-206ENST00000456506 OSBPL5Q9H0X9 879 aaPredicted RBP14.73□□□□□ -0.05
LMCD1-206ENST00000456506 BIN2Q9UBW5 565 aaPredicted RBP14.73□□□□□ -0.05
LMCD1-206ENST00000456506 GJD2Q9UKL4 321 aa14.73□□□□□ -0.05
LMCD1-206ENST00000456506 HDAC5Q9UQL6 1122 aa14.73□□□□□ -0.05
LMCD1-206ENST00000456506 NAV1Q8NEY1 1877 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 MAP4K4O95819 1239 aaPredicted RBP14.72□□□□□ -0.05
LMCD1-206ENST00000456506 CAPN2P17655 700 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 CAP2P40123 477 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 MCAMP43121 646 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 JAG1P78504 1218 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 SPP2Q13103 211 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 SH3D19Q5HYK7 790 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 SPATA5Q8NB90 893 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 SMCR8Q8TEV9 937 aaPredicted RBP14.72□□□□□ -0.05
LMCD1-206ENST00000456506 DEFB118Q96PH6 123 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 TNNQ9UQP3 1299 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 AKAP2Q9Y2D5 859 aa14.72□□□□□ -0.05
LMCD1-206ENST00000456506 PNMA6EA0A0J9YXQ4 647 aa14.71□□□□□ -0.05
LMCD1-206ENST00000456506 ZNF280CQ8ND82 737 aa14.71□□□□□ -0.05
LMCD1-206ENST00000456506 DIS3LQ8TF46 1054 aaKnown RBP14.71□□□□□ -0.05
LMCD1-206ENST00000456506 DNAJC18Q9H819 358 aa14.71□□□□□ -0.05
LMCD1-206ENST00000456506 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.71□□□□□ -0.05
LMCD1-206ENST00000456506 A0A0G2JMZ2 1700 aa14.7□□□□□ -0.06
LMCD1-206ENST00000456506 A0A1W2PPC1 479 aa14.7□□□□□ -0.06
LMCD1-206ENST00000456506 SOX1O00570 391 aaPredicted RBP14.7□□□□□ -0.06
LMCD1-206ENST00000456506 GNAI3P08754 354 aa14.7□□□□□ -0.06
LMCD1-206ENST00000456506 HMGCS2P54868 508 aa14.7□□□□□ -0.06
LMCD1-206ENST00000456506 TRIM32Q13049 653 aa14.7□□□□□ -0.06
LMCD1-206ENST00000456506 METTL16Q86W50 562 aaKnown RBP14.7□□□□□ -0.06
LMCD1-206ENST00000456506 SH3RF3Q8TEJ3 882 aaPredicted RBP14.7□□□□□ -0.06
LMCD1-206ENST00000456506 TBC1D2Q9BYX2 928 aa14.7□□□□□ -0.06
LMCD1-206ENST00000456506 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.7□□□□□ -0.06
LMCD1-206ENST00000456506 MORF4L1Q9UBU8 362 aa14.7□□□□□ -0.06
LMCD1-206ENST00000456506 PNMA3Q9UL41 463 aa14.7□□□□□ -0.06
LMCD1-206ENST00000456506 LTBP2Q14767 1821 aa14.7□□□□□ -0.06
LMCD1-206ENST00000456506 DNAH12Q6ZR08 3092 aa14.69□□□□□ -0.06
LMCD1-206ENST00000456506 GCLCP48506 637 aaPredicted RBP14.69□□□□□ -0.06
LMCD1-206ENST00000456506 SHROOM1Q2M3G4 852 aaPredicted RBP14.69□□□□□ -0.06
LMCD1-206ENST00000456506 POTEEQ6S8J3 1075 aa14.69□□□□□ -0.06
LMCD1-206ENST00000456506 ADGRA1Q86SQ6 560 aa14.69□□□□□ -0.06
LMCD1-206ENST00000456506 COA7Q96BR5 231 aa14.69□□□□□ -0.06
LMCD1-206ENST00000456506 PAWRQ96IZ0 340 aaKnown RBP14.69□□□□□ -0.06
LMCD1-206ENST00000456506 NEUROD6Q96NK8 337 aa14.69□□□□□ -0.06
LMCD1-206ENST00000456506 WDR18Q9BV38 432 aa14.69□□□□□ -0.06
LMCD1-206ENST00000456506 ASCC2Q9H1I8 757 aaPredicted RBP14.69□□□□□ -0.06
LMCD1-206ENST00000456506 NR2E3Q9Y5X4 410 aa14.69□□□□□ -0.06
LMCD1-206ENST00000456506 TFRCP02786 760 aaKnown RBP14.68□□□□□ -0.06
LMCD1-206ENST00000456506 LDHCP07864 332 aa14.68□□□□□ -0.06
LMCD1-206ENST00000456506 TRIM27P14373 513 aa14.68□□□□□ -0.06
LMCD1-206ENST00000456506 GSTO1P78417 241 aa14.68□□□□□ -0.06
LMCD1-206ENST00000456506 HERC5Q9UII4 1024 aaKnown RBP14.68□□□□□ -0.06
LMCD1-206ENST00000456506 ZNF236Q9UL36 1845 aa14.68□□□□□ -0.06
LMCD1-206ENST00000456506 ZNFX1Q9P2E3 1918 aaKnown RBP14.67□□□□□ -0.06
LMCD1-206ENST00000456506 USP17L5A8MUK1 530 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 EVI5O60447 810 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 PEX10O60683 326 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 HMGCRP04035 888 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 PPP4CP60510 307 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 MAP3K21Q5TCX8 1036 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 TEX11Q8IYF3 940 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 ANKLE1Q8NAG6 615 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 TRIB2Q92519 343 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 GDF15Q99988 308 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 TXNRD2Q9NNW7 524 aa14.67□□□□□ -0.06
LMCD1-206ENST00000456506 HOXA7P31268 230 aaPredicted RBP14.66□□□□□ -0.06
LMCD1-206ENST00000456506 BACE1P56817 501 aa14.66□□□□□ -0.06
LMCD1-206ENST00000456506 POLA2Q14181 598 aa14.66□□□□□ -0.06
LMCD1-206ENST00000456506 RAI14Q9P0K7 980 aa14.66□□□□□ -0.06
LMCD1-206ENST00000456506 PI4KBQ9UBF8 816 aa14.66□□□□□ -0.06
LMCD1-206ENST00000456506 STAP2Q9UGK3 403 aa14.66□□□□□ -0.06
LMCD1-206ENST00000456506 MYH7P12883 1935 aa14.66□□□□□ -0.06
LMCD1-206ENST00000456506 COL11A1P12107 1806 aaPredicted RBP14.66□□□□□ -0.06
LMCD1-206ENST00000456506 FLT1P17948 1338 aa14.66□□□□□ -0.06
LMCD1-206ENST00000456506 RPTORQ8N122 1335 aa14.66□□□□□ -0.06
LMCD1-206ENST00000456506 GNAI2P04899 355 aa14.65□□□□□ -0.06
LMCD1-206ENST00000456506 CYP2E1P05181 493 aaPredicted RBP14.65□□□□□ -0.06
LMCD1-206ENST00000456506 UQCRFS1P1P0C7P4 283 aa14.65□□□□□ -0.06
LMCD1-206ENST00000456506 BMP8BP34820 402 aa14.65□□□□□ -0.06
LMCD1-206ENST00000456506 PABPC4Q13310 644 aaKnown RBP eCLIP14.65□□□□□ -0.06
LMCD1-206ENST00000456506 MTMR2Q13614 643 aa14.65□□□□□ -0.06
LMCD1-206ENST00000456506 NECAB2Q7Z6G3 386 aa14.65□□□□□ -0.06
LMCD1-206ENST00000456506 USP6NLQ92738 828 aa14.65□□□□□ -0.06
LMCD1-206ENST00000456506 LRCH3Q96II8 777 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms