RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 PPP6R1Q9UPN7 881 aa5.2□□□□□ -1.58
DEPDC1-202ENST00000456315 ABCA9Q8IUA7 1624 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 ATP1A1P05023 1023 aaKnown RBP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 MAP2K2P36507 400 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 AARSP49588 968 aaKnown RBP eCLIP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 SLC7A5Q01650 507 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 GUCY1A3Q02108 690 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 EVX2Q03828 476 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 SEMA3FQ13275 785 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 PDIA6Q15084 440 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 CEP57L1Q8IYX8 460 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 IQCKQ8N0W5 287 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 PHC3Q8NDX5 983 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 CTCFLQ8NI51 663 aaPredicted RBP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 MPHOSPH8Q99549 860 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 OCEL1Q9H607 264 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 SBNO1A3KN83 1393 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 MYH2Q9UKX2 1941 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 RFX5P48382 616 aaPredicted RBP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 ATP1A2P50993 1020 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 C11orf91Q3C1V1 193 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 TBC1D25Q3MII6 688 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 CASC1Q6TDU7 716 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 AACSQ86V21 672 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 CMTR1Q8N1G2 835 aaKnown RBP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 MRPS27Q92552 414 aaKnown RBP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 NUDT16Q96DE0 195 aaKnown RBP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 SLC26A8Q96RN1 970 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 MYL10Q9BUA6 226 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 CARMIL3Q8ND23 1372 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 NWD2Q9ULI1 1742 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 CACNA1FO60840 1977 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 EPHB6O15197 1021 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 KINO60870 393 aaKnown RBP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 SLC3A2P08195 630 aaKnown RBP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 PLEKP08567 350 aaPredicted RBP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 CASP14P31944 242 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 TUBP50607 506 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 RBM5P52756 815 aaKnown RBP eCLIP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 E2F5Q15329 346 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 THEMIS2Q5TEJ8 643 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 C6orf89Q6UWU4 347 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 OSCARQ8IYS5 282 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 OSBP2Q969R2 916 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 NEK1Q96PY6 1258 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 KCNMB3Q9NPA1 279 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 ANO10Q9NW15 660 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 ADD3Q9UEY8 706 aaKnown RBP5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 KAT6AQ92794 2004 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 CFAP47Q6ZTR5 3102 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 PLSCR1O15162 318 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 NR5A1Q13285 461 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 LRP10Q7Z4F1 713 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 ANKLE1Q8NAG6 615 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 SPATA20Q8TB22 786 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 PIK3R5Q8WYR1 880 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 BRMS1Q9HCU9 246 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 IMPACTQ9P2X3 320 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 SH3BP1Q9Y3L3 701 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 CCDC61Q9Y6R9 512 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 ANKRD26Q9UPS8 1709 aa5.19□□□□□ -1.58
DEPDC1-202ENST00000456315 KDM4FA0A1W2PPD8 638 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 ANKRD33BA6NCL7 494 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 C21orf2O43822 256 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 SARSP49591 514 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 SF3A1Q15459 793 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 NTRK3Q16288 839 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 ZNF569Q5MCW4 686 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 CAPN6Q9Y6Q1 641 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 A0A087WUV0 522 aaPredicted RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 ZNF233A6NK53 670 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 F8W031 263 aaPredicted RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 EPB41L2O43491 1005 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 ATP8B1O43520 1251 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 ZEB2O60315 1214 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 NEMFO60524 1076 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 PFKFB2O60825 505 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 MCCP23508 829 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 CXCR5P32302 372 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 TPM4P67936 248 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 PTPN12Q05209 780 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 RBL2Q08999 1139 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 TMEM62Q0P6H9 643 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 GRIK3Q13003 919 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 CCDC102AQ96A19 550 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 THOC1Q96FV9 657 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 MAP3K14Q99558 947 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 CHD2O14647 1828 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 STX10O60499 249 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 RANBP6O60518 1105 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 PMS1P54277 932 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 KIF23Q02241 960 aaPredicted RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 KCNB1Q14721 858 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 CLASRPQ8N2M8 674 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 C19orf44Q9H6X5 657 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 ASXL2Q76L83 1435 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 ADGRL3Q9HAR2 1447 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 NWD1Q149M9 1564 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 SPATA31A3Q5VYP0 1347 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms