RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 ERICH6Q7L0X2 663 aa18.38■□□□□ 0.53
UBE2F-219ENST00000455999 SLF2Q8IX21 1173 aa18.38■□□□□ 0.53
UBE2F-219ENST00000455999 COA7Q96BR5 231 aa18.38■□□□□ 0.53
UBE2F-219ENST00000455999 CRISPLD2Q9H0B8 497 aa18.38■□□□□ 0.53
UBE2F-219ENST00000455999 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.38■□□□□ 0.53
UBE2F-219ENST00000455999 STAP2Q9UGK3 403 aa18.38■□□□□ 0.53
UBE2F-219ENST00000455999 PDS5AQ29RF7 1337 aaKnown RBP18.38■□□□□ 0.53
UBE2F-219ENST00000455999 TBC1D12O60347 775 aa18.37■□□□□ 0.53
UBE2F-219ENST00000455999 TRIM32Q13049 653 aa18.37■□□□□ 0.53
UBE2F-219ENST00000455999 FAM110CQ1W6H9 321 aa18.37■□□□□ 0.53
UBE2F-219ENST00000455999 SPTY2D1Q68D10 685 aaPredicted RBP18.37■□□□□ 0.53
UBE2F-219ENST00000455999 TBC1D9Q6ZT07 1266 aa18.37■□□□□ 0.53
UBE2F-219ENST00000455999 LRCH3Q96II8 777 aa18.37■□□□□ 0.53
UBE2F-219ENST00000455999 HMGCS2P54868 508 aa18.36■□□□□ 0.53
UBE2F-219ENST00000455999 TRMT2AQ8IZ69 625 aaKnown RBP18.36■□□□□ 0.53
UBE2F-219ENST00000455999 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.36■□□□□ 0.53
UBE2F-219ENST00000455999 HMG20BQ9P0W2 317 aa18.36■□□□□ 0.53
UBE2F-219ENST00000455999 PROCA1Q8NCQ7 364 aaPredicted RBP18.35■□□□□ 0.53
UBE2F-219ENST00000455999 NSUN4Q96CB9 384 aaKnown RBP18.35■□□□□ 0.53
UBE2F-219ENST00000455999 NEUROD6Q96NK8 337 aa18.35■□□□□ 0.53
UBE2F-219ENST00000455999 OSBPL5Q9H0X9 879 aaPredicted RBP18.35■□□□□ 0.53
UBE2F-219ENST00000455999 PNMA3Q9UL41 463 aa18.35■□□□□ 0.53
UBE2F-219ENST00000455999 LAMA3Q16787 3333 aa18.35■□□□□ 0.53
UBE2F-219ENST00000455999 COL2A1P02458 1487 aaPredicted RBP18.34■□□□□ 0.53
UBE2F-219ENST00000455999 SRGAP3O43295 1099 aa18.34■□□□□ 0.53
UBE2F-219ENST00000455999 PEX10O60683 326 aa18.34■□□□□ 0.53
UBE2F-219ENST00000455999 NPM3O75607 178 aaKnown RBP18.34■□□□□ 0.53
UBE2F-219ENST00000455999 MVPQ14764 893 aaKnown RBP18.34■□□□□ 0.53
UBE2F-219ENST00000455999 ZNF280CQ8ND82 737 aa18.34■□□□□ 0.53
UBE2F-219ENST00000455999 API5Q9BZZ5 524 aaKnown RBP18.34■□□□□ 0.53
UBE2F-219ENST00000455999 GJD2Q9UKL4 321 aa18.34■□□□□ 0.53
UBE2F-219ENST00000455999 A0A1W2PPC1 479 aa18.33■□□□□ 0.52
UBE2F-219ENST00000455999 CAP2P40123 477 aa18.33■□□□□ 0.52
UBE2F-219ENST00000455999 NECAB2Q7Z6G3 386 aa18.33■□□□□ 0.52
UBE2F-219ENST00000455999 C7orf61Q8IZ16 206 aa18.33■□□□□ 0.52
UBE2F-219ENST00000455999 ASCC2Q9H1I8 757 aaPredicted RBP18.33■□□□□ 0.52
UBE2F-219ENST00000455999 ZMYND8Q9ULU4 1186 aaPredicted RBP18.33■□□□□ 0.52
UBE2F-219ENST00000455999 HDAC5Q9UQL6 1122 aa18.33■□□□□ 0.52
UBE2F-219ENST00000455999 AKAP2Q9Y2D5 859 aa18.33■□□□□ 0.52
UBE2F-219ENST00000455999 HMGCRP04035 888 aa18.32■□□□□ 0.52
UBE2F-219ENST00000455999 GCLCP48506 637 aaPredicted RBP18.32■□□□□ 0.52
UBE2F-219ENST00000455999 MNX1P50219 401 aaPredicted RBP18.32■□□□□ 0.52
UBE2F-219ENST00000455999 SPATA5Q8NB90 893 aa18.32■□□□□ 0.52
UBE2F-219ENST00000455999 RAI14Q9P0K7 980 aa18.32■□□□□ 0.52
UBE2F-219ENST00000455999 COL6A3P12111 3177 aa18.31■□□□□ 0.52
UBE2F-219ENST00000455999 USP17L5A8MUK1 530 aa18.31■□□□□ 0.52
UBE2F-219ENST00000455999 LDHCP07864 332 aa18.31■□□□□ 0.52
UBE2F-219ENST00000455999 CAPN2P17655 700 aa18.31■□□□□ 0.52
UBE2F-219ENST00000455999 JAG1P78504 1218 aa18.31■□□□□ 0.52
UBE2F-219ENST00000455999 TEX11Q8IYF3 940 aa18.31■□□□□ 0.52
UBE2F-219ENST00000455999 SLC17A8Q8NDX2 589 aa18.31■□□□□ 0.52
UBE2F-219ENST00000455999 SH3RF3Q8TEJ3 882 aaPredicted RBP18.31■□□□□ 0.52
UBE2F-219ENST00000455999 TRIB2Q92519 343 aa18.31■□□□□ 0.52
UBE2F-219ENST00000455999 GDF15Q99988 308 aa18.31■□□□□ 0.52
UBE2F-219ENST00000455999 RPTORQ8N122 1335 aa18.3■□□□□ 0.52
UBE2F-219ENST00000455999 SYN1P17600 705 aa18.3■□□□□ 0.52
UBE2F-219ENST00000455999 ARID4AP29374 1257 aaPredicted RBP18.3■□□□□ 0.52
UBE2F-219ENST00000455999 MCAMP43121 646 aa18.3■□□□□ 0.52
UBE2F-219ENST00000455999 GSTO1P78417 241 aa18.3■□□□□ 0.52
UBE2F-219ENST00000455999 SHROOM1Q2M3G4 852 aaPredicted RBP18.3■□□□□ 0.52
UBE2F-219ENST00000455999 SH3D19Q5HYK7 790 aa18.3■□□□□ 0.52
UBE2F-219ENST00000455999 GORABQ5T7V8 394 aa18.3■□□□□ 0.52
UBE2F-219ENST00000455999 HMX1Q9NP08 348 aaPredicted RBP18.3■□□□□ 0.52
UBE2F-219ENST00000455999 TNNQ9UQP3 1299 aa18.3■□□□□ 0.52
UBE2F-219ENST00000455999 DLL1O00548 723 aa18.29■□□□□ 0.52
UBE2F-219ENST00000455999 CYP2B6P20813 491 aa18.29■□□□□ 0.52
UBE2F-219ENST00000455999 PABPC4Q13310 644 aaKnown RBP eCLIP18.29■□□□□ 0.523e-6■■■□□ 15.2
UBE2F-219ENST00000455999 MTX1Q13505 466 aa18.29■□□□□ 0.52
UBE2F-219ENST00000455999 MTMR2Q13614 643 aa18.29■□□□□ 0.52
UBE2F-219ENST00000455999 ANKLE1Q8NAG6 615 aa18.29■□□□□ 0.52
UBE2F-219ENST00000455999 TXNRD2Q9NNW7 524 aa18.29■□□□□ 0.52
UBE2F-219ENST00000455999 GNAI3P08754 354 aa18.28■□□□□ 0.52
UBE2F-219ENST00000455999 CT47B1P0C2W7 299 aaPredicted RBP18.28■□□□□ 0.52
UBE2F-219ENST00000455999 RARSP54136 660 aaKnown RBP18.28■□□□□ 0.52
UBE2F-219ENST00000455999 P2RX7Q99572 595 aaKnown RBP18.28■□□□□ 0.52
UBE2F-219ENST00000455999 TBC1D2Q9BYX2 928 aa18.28■□□□□ 0.52
UBE2F-219ENST00000455999 DNAJC18Q9H819 358 aa18.28■□□□□ 0.52
UBE2F-219ENST00000455999 AS3MTQ9HBK9 375 aa18.28■□□□□ 0.52
UBE2F-219ENST00000455999 SNRKQ9NRH2 765 aa18.28■□□□□ 0.52
UBE2F-219ENST00000455999 AATFQ9NY61 560 aaKnown RBP eCLIP18.28■□□□□ 0.52
UBE2F-219ENST00000455999 MORF4L1Q9UBU8 362 aa18.28■□□□□ 0.52
UBE2F-219ENST00000455999 HERC5Q9UII4 1024 aaKnown RBP18.28■□□□□ 0.52
UBE2F-219ENST00000455999 PNMA6EA0A0J9YXQ4 647 aa18.27■□□□□ 0.52
UBE2F-219ENST00000455999 MAP4K4O95819 1239 aaPredicted RBP18.27■□□□□ 0.52
UBE2F-219ENST00000455999 BACE1P56817 501 aa18.27■□□□□ 0.52
UBE2F-219ENST00000455999 NBPF3Q9H094 633 aa18.27■□□□□ 0.52
UBE2F-219ENST00000455999 LRP2BPQ9P2M1 347 aa18.27■□□□□ 0.52
UBE2F-219ENST00000455999 MYH8P13535 1937 aa18.27■□□□□ 0.51
UBE2F-219ENST00000455999 ZNFX1Q9P2E3 1918 aaKnown RBP18.26■□□□□ 0.51
UBE2F-219ENST00000455999 BMP8BP34820 402 aa18.26■□□□□ 0.51
UBE2F-219ENST00000455999 IRX3P78415 501 aaPredicted RBP18.26■□□□□ 0.51
UBE2F-219ENST00000455999 ADGRA1Q86SQ6 560 aa18.26■□□□□ 0.51
UBE2F-219ENST00000455999 MAPKAPK5Q8IW41 473 aa18.26■□□□□ 0.51
UBE2F-219ENST00000455999 TGFBRAP1Q8WUH2 860 aa18.26■□□□□ 0.51
UBE2F-219ENST00000455999 WDR18Q9BV38 432 aa18.26■□□□□ 0.51
UBE2F-219ENST00000455999 C11orf49Q9H6J7 331 aa18.26■□□□□ 0.51
UBE2F-219ENST00000455999 PI4KBQ9UBF8 816 aa18.26■□□□□ 0.51
UBE2F-219ENST00000455999 OGDHLQ9ULD0 1010 aa18.26■□□□□ 0.51
UBE2F-219ENST00000455999 PFASO15067 1338 aa18.25■□□□□ 0.51
UBE2F-219ENST00000455999 GDF11O95390 407 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms