RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 GOLGA8BA8MQT2 603 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 B4E1Z4 1266 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 USP17L12C9JPN9 530 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 USP17L21D6R901 530 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 KDM4AO75164 1064 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 NBR1Q14596 966 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 GSE1Q14687 1217 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 SEC23AQ15436 765 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 CYB5R4Q7L1T6 521 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 USP17L1Q7RTZ2 530 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 CATIPQ7Z7H3 387 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 TEX2Q8IWB9 1127 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 TRIM22Q8IYM9 498 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 ZNF396Q96N95 335 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 ZSCAN10Q96SZ4 725 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 DHX36Q9H2U1 1008 aaKnown RBP7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 AATFQ9NY61 560 aaKnown RBP eCLIP7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 SYNPO2Q9UMS6 1093 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 HPS5Q9UPZ3 1129 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 NEDD4P46934 1319 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 H3BQV1 296 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 PRKAB2O43741 272 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 KIF5BP33176 963 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 NOVP48745 357 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 UBE2HP62256 183 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 IFFO2Q5TF58 517 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 FKBP1CQ5VVH2 108 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 C16orf86Q6ZW13 317 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 LMBRD1Q9NUN5 540 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 GREB1LQ9C091 1923 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 XBP1P17861 261 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 BTDP43251 543 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 RHBDL3P58872 404 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 DYNLL1P63167 89 aaKnown RBP7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 GTF2IP78347 998 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 L1TD1Q5T7N2 865 aaKnown RBP7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 NFXL1Q6ZNB6 911 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 NOL8Q76FK4 1167 aaKnown RBP7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 TEX11Q8IYF3 940 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 NECAB1Q8N987 351 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 MTMR14Q8NCE2 650 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 CCDC17Q96LX7 622 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 IDI2Q9BXS1 227 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 RNF26Q9BY78 433 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 PIM2Q9P1W9 311 aa7.97□□□□□ -1.13
ECHDC1-210ENST00000454859 WTIPA6NIX2 430 aaPredicted RBP7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 MINDY4BA8MYZ0 360 aa7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 FMNL1O95466 1100 aaPredicted RBP7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 CTDNEP1O95476 244 aa7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 RTN1Q16799 776 aa7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 DACT2Q5SW24 774 aa7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 MCTP1Q6DN14 999 aa7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 FBXO18Q8NFZ0 1043 aa7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 SDR42E1Q8WUS8 393 aa7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 MCM9Q9NXL9 1143 aa7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 BRPF3Q9ULD4 1205 aa7.96□□□□□ -1.13
ECHDC1-210ENST00000454859 GOLGA8AA7E2F4 631 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 ENTPD3O75355 529 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 DEXIO95424 95 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 IARSP41252 1262 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 CTDSPL2Q05D32 466 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 SSRP1Q08945 709 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 TRIM29Q14134 588 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 IFIT1BQ5T764 474 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 MSL1Q68DK7 614 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 ZNF654Q8IZM8 581 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 ZNF444Q8N0Y2 327 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 FANCBQ8NB91 859 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 AGBL3Q8NEM8 1001 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 ORC3Q9UBD5 711 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 HDAC9Q9UKV0 1011 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 DAGLAQ9Y4D2 1042 aa7.96□□□□□ -1.14
ECHDC1-210ENST00000454859 SCN9AQ15858 1988 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 TNKSO95271 1327 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 FLT1P17948 1338 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 ECE2O60344 883 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 POLR3DP05423 398 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 HLA-DOAP06340 250 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 ZNF445P59923 1031 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 RESTQ13127 1097 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 NTRK3Q16288 839 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 NEDD1Q8NHV4 660 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 SH3RF3Q8TEJ3 882 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 C8orf76Q96K31 380 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 TCEANC2Q96MN5 208 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 SH3GLB2Q9NR46 395 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 TTF2Q9UNY4 1162 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 DDX49Q9Y6V7 483 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 ATRNL1Q5VV63 1379 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 A0A0G2JLW4 131 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 hCG_1984214I3L0E3 225 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 PRPF3O43395 683 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 VIL1P09327 827 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 RPS12P25398 132 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 PKP1Q13835 747 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 GALNT17Q6IS24 598 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 METTL16Q86W50 562 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 FOXP4Q8IVH2 680 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 ZNF713Q8N859 430 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 ENAHQ8N8S7 591 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms