RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 KRI1Q8N9T8 703 aaKnown RBP13.75□□□□□ -0.21
SMPD4-213ENST00000454468 IGDCC4Q8TDY8 1250 aa13.75□□□□□ -0.21
SMPD4-213ENST00000454468 CCDC34Q96HJ3 373 aa13.75□□□□□ -0.21
SMPD4-213ENST00000454468 USP21Q9UK80 565 aa13.75□□□□□ -0.21
SMPD4-213ENST00000454468 PCDHB6Q9Y5E3 794 aa13.75□□□□□ -0.21
SMPD4-213ENST00000454468 KIF1AQ12756 1690 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 PLEKHA8P1O95397 391 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 YEATS4O95619 227 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 EIF6P56537 245 aaKnown RBP13.74□□□□□ -0.21
SMPD4-213ENST00000454468 LONRF3Q496Y0 759 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 NOSTRINQ8IVI9 506 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 MAPKAPK5Q8IW41 473 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 SERTAD1Q9UHV2 236 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 SPATA31A1Q5TZJ5 1347 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 AFDNP55196 1824 aaKnown RBP13.74□□□□□ -0.21
SMPD4-213ENST00000454468 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 NTSR2O95665 410 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 ARID4AP29374 1257 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-213ENST00000454468 CBX1P83916 185 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 GRIN1Q05586 938 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 FMR1NBQ8N0W7 255 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-213ENST00000454468 ZNF444Q8N0Y2 327 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-213ENST00000454468 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 KIAA1524Q8TCG1 905 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 DYNLL2Q96FJ2 89 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMPD4-213ENST00000454468 RFX7Q2KHR2 1363 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 BCL9O00512 1426 aa13.74□□□□□ -0.21
SMPD4-213ENST00000454468 MARCH6O60337 910 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 USP17L8P0C7I0 530 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 GOLGA8HP0CJ92 632 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 SLC39A14Q15043 492 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 PIK3AP1Q6ZUJ8 805 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 TDRD7Q8NHU6 1098 aaKnown RBP13.73□□□□□ -0.21
SMPD4-213ENST00000454468 EEF2KMTQ96G04 330 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 CDCA7Q9BWT1 371 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-213ENST00000454468 CPVLQ9H3G5 476 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 TGFBRAP1Q8WUH2 860 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 SMARCE1Q969G3 411 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 KAT14Q9H8E8 782 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 PCDHA5Q9Y5H7 936 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 FAM196AQ6ZSG2 479 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 RASGRP4Q8TDF6 673 aa13.73□□□□□ -0.21
SMPD4-213ENST00000454468 GPKOWQ92917 476 aaPredicted RBP eCLIP13.73□□□□□ -0.21
SMPD4-213ENST00000454468 TRIM75PA6NK02 468 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 TOP1P11387 765 aaKnown RBP13.72□□□□□ -0.21
SMPD4-213ENST00000454468 MECOMQ03112 1051 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 TRAPPC3LQ5T215 181 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 TXNRD3Q86VQ6 643 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 FAM84BQ96KN1 310 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-213ENST00000454468 POLR3EQ9NVU0 708 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 DEXIO95424 95 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 PDE4BQ07343 736 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 NAA30Q147X3 362 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-213ENST00000454468 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 LDHBP07195 334 aaKnown RBP13.72□□□□□ -0.21
SMPD4-213ENST00000454468 TSPY3P0CV98 308 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 TSPY8P0CW00 308 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 TFAP4Q01664 338 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 CEP135Q66GS9 1140 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 ATL3Q6DD88 541 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 USP49Q70CQ1 688 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 SMYD4Q8IYR2 804 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-213ENST00000454468 TMTC2Q8N394 836 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 ZSCAN10Q96SZ4 725 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-213ENST00000454468 RIC1Q4ADV7 1423 aa13.72□□□□□ -0.21
SMPD4-213ENST00000454468 CMA1P23946 247 aa13.71□□□□□ -0.21
SMPD4-213ENST00000454468 FANCCQ00597 558 aa13.71□□□□□ -0.21
SMPD4-213ENST00000454468 CNBD1Q8NA66 436 aa13.71□□□□□ -0.21
SMPD4-213ENST00000454468 SLC44A5Q8NCS7 719 aa13.71□□□□□ -0.21
SMPD4-213ENST00000454468 BLZF1Q9H2G9 400 aa13.71□□□□□ -0.21
SMPD4-213ENST00000454468 FANCLQ9NW38 375 aa13.71□□□□□ -0.21
SMPD4-213ENST00000454468 USP27XA6NNY8 438 aa13.71□□□□□ -0.21
SMPD4-213ENST00000454468 SHC4Q6S5L8 630 aa13.71□□□□□ -0.21
SMPD4-213ENST00000454468 AGXT2Q9BYV1 514 aa13.71□□□□□ -0.21
SMPD4-213ENST00000454468 MROH7-TTC4A0A0A0MT08 1334 aa13.71□□□□□ -0.22
SMPD4-213ENST00000454468 FGFR2P21802 821 aa13.71□□□□□ -0.22
SMPD4-213ENST00000454468 TCRBV5S4A2TA0A5A2 114 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 UFL1O94874 794 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 RBM5P52756 815 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMPD4-213ENST00000454468 EPSTI1Q96J88 318 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 MPHOSPH10O00566 681 aaKnown RBP13.7□□□□□ -0.22
SMPD4-213ENST00000454468 CAVIN2O95810 425 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 NLRP12P59046 1061 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 IQCB1Q15051 598 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 LRRC8AQ8IWT6 810 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 CRACR2BQ8N4Y2 399 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-213ENST00000454468 PCMTD1Q96MG8 357 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-213ENST00000454468 ZNF804BA4D1E1 1349 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 DYNC1I1O14576 645 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 KRT2P35908 639 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 ENAHQ8N8S7 591 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-213ENST00000454468 ENGASEQ8NFI3 743 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 ARHGEF1Q92888 912 aaKnown RBP13.7□□□□□ -0.22
SMPD4-213ENST00000454468 CSRNP2Q9H175 543 aa13.7□□□□□ -0.22
SMPD4-213ENST00000454468 TRPM3Q9HCF6 1732 aaPredicted RBP13.69□□□□□ -0.22
SMPD4-213ENST00000454468 SCN11AQ9UI33 1791 aa13.69□□□□□ -0.22
SMPD4-213ENST00000454468 IGSF3O75054 1194 aa13.69□□□□□ -0.22
SMPD4-213ENST00000454468 UBE4AQ14139 1066 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms