RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 PI16Q6UXB8 463 aa29.22■■■□□ 2.27
LYSMD2-202ENST00000454181 TEX11Q8IYF3 940 aa29.22■■■□□ 2.27
LYSMD2-202ENST00000454181 PROCA1Q8NCQ7 364 aaPredicted RBP29.22■■■□□ 2.27
LYSMD2-202ENST00000454181 ZNF384Q8TF68 577 aa29.22■■■□□ 2.27
LYSMD2-202ENST00000454181 TBC1D2Q9BYX2 928 aa29.22■■■□□ 2.27
LYSMD2-202ENST00000454181 SGPL1O95470 568 aa29.21■■■□□ 2.27
LYSMD2-202ENST00000454181 INHAP05111 366 aa29.21■■■□□ 2.27
LYSMD2-202ENST00000454181 ARID4AP29374 1257 aaPredicted RBP29.21■■■□□ 2.27
LYSMD2-202ENST00000454181 IRF5Q13568 498 aa29.21■■■□□ 2.27
LYSMD2-202ENST00000454181 ZNF280CQ8ND82 737 aa29.21■■■□□ 2.27
LYSMD2-202ENST00000454181 TFRCP02786 760 aaKnown RBP29.2■■■□□ 2.26
LYSMD2-202ENST00000454181 TREML2Q5T2D2 321 aa29.2■■■□□ 2.26
LYSMD2-202ENST00000454181 ATF7IPQ6VMQ6 1270 aa29.2■■■□□ 2.26
LYSMD2-202ENST00000454181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.2■■■□□ 2.26
LYSMD2-202ENST00000454181 DOCK1Q14185 1865 aa29.2■■■□□ 2.26
LYSMD2-202ENST00000454181 TRIM27P14373 513 aa29.19■■■□□ 2.26
LYSMD2-202ENST00000454181 CAPN2P17655 700 aa29.19■■■□□ 2.26
LYSMD2-202ENST00000454181 FAM110CQ1W6H9 321 aa29.19■■■□□ 2.26
LYSMD2-202ENST00000454181 CCER2I3L3R5 266 aa29.18■■■□□ 2.26
LYSMD2-202ENST00000454181 BAG3O95817 575 aa29.18■■■□□ 2.26
LYSMD2-202ENST00000454181 CAP2P40123 477 aa29.18■■■□□ 2.26
LYSMD2-202ENST00000454181 GCLCP48506 637 aaPredicted RBP29.18■■■□□ 2.26
LYSMD2-202ENST00000454181 UBE2Q1Q7Z7E8 422 aa29.18■■■□□ 2.26
LYSMD2-202ENST00000454181 CLUAP1Q96AJ1 413 aa29.18■■■□□ 2.26
LYSMD2-202ENST00000454181 AS3MTQ9HBK9 375 aa29.18■■■□□ 2.26
LYSMD2-202ENST00000454181 HERC5Q9UII4 1024 aaKnown RBP29.18■■■□□ 2.26
LYSMD2-202ENST00000454181 MGAMO43451 1857 aa29.17■■■□□ 2.26
LYSMD2-202ENST00000454181 PNMA6EA0A0J9YXQ4 647 aa29.17■■■□□ 2.26
LYSMD2-202ENST00000454181 USP17L5A8MUK1 530 aa29.17■■■□□ 2.26
LYSMD2-202ENST00000454181 MCAMP43121 646 aa29.17■■■□□ 2.26
LYSMD2-202ENST00000454181 HMGCS2P54868 508 aa29.17■■■□□ 2.26
LYSMD2-202ENST00000454181 OS9Q13438 667 aaPredicted RBP29.17■■■□□ 2.26
LYSMD2-202ENST00000454181 DEFB118Q96PH6 123 aa29.17■■■□□ 2.26
LYSMD2-202ENST00000454181 PLCG2P16885 1265 aa29.16■■■□□ 2.26
LYSMD2-202ENST00000454181 CCDC158Q5M9N0 1113 aa29.16■■■□□ 2.26
LYSMD2-202ENST00000454181 TTC39AQ5SRH9 613 aa29.16■■■□□ 2.26
LYSMD2-202ENST00000454181 NAA16Q6N069 864 aaPredicted RBP29.16■■■□□ 2.26
LYSMD2-202ENST00000454181 PI4KBQ9UBF8 816 aa29.16■■■□□ 2.26
LYSMD2-202ENST00000454181 COL2A1P02458 1487 aaPredicted RBP29.16■■■□□ 2.26
LYSMD2-202ENST00000454181 TRIOBPQ9H2D6 2365 aa29.15■■■□□ 2.26
LYSMD2-202ENST00000454181 SH3RF3Q8TEJ3 882 aaPredicted RBP29.15■■■□□ 2.26
LYSMD2-202ENST00000454181 TRIM34Q9BYJ4 488 aa29.15■■■□□ 2.26
LYSMD2-202ENST00000454181 DHX36Q9H2U1 1008 aaKnown RBP29.15■■■□□ 2.26
LYSMD2-202ENST00000454181 SNRKQ9NRH2 765 aa29.14■■■□□ 2.26
LYSMD2-202ENST00000454181 AATFQ9NY61 560 aaKnown RBP eCLIP29.14■■■□□ 2.26
LYSMD2-202ENST00000454181 RBM27Q9P2N5 1060 aaKnown RBP29.14■■■□□ 2.26
LYSMD2-202ENST00000454181 BCAR3O75815 825 aa29.13■■■□□ 2.25
LYSMD2-202ENST00000454181 PTPRFP10586 1907 aa29.12■■■□□ 2.25
LYSMD2-202ENST00000454181 EVI5O60447 810 aa29.12■■■□□ 2.25
LYSMD2-202ENST00000454181 ASCC2Q9H1I8 757 aaPredicted RBP29.12■■■□□ 2.25
LYSMD2-202ENST00000454181 TMOD4Q9NZQ9 345 aa29.12■■■□□ 2.25
LYSMD2-202ENST00000454181 TNNQ9UQP3 1299 aa29.12■■■□□ 2.25
LYSMD2-202ENST00000454181 PHIPQ8WWQ0 1821 aa29.11■■■□□ 2.25
LYSMD2-202ENST00000454181 CRACR2BQ8N4Y2 399 aaPredicted RBP29.11■■■□□ 2.25
LYSMD2-202ENST00000454181 GPR108Q9NPR9 543 aa29.11■■■□□ 2.25
LYSMD2-202ENST00000454181 ASNSP08243 561 aa29.1■■■□□ 2.25
LYSMD2-202ENST00000454181 IRX3P78415 501 aaPredicted RBP29.1■■■□□ 2.25
LYSMD2-202ENST00000454181 RRP1BQ14684 758 aaKnown RBP29.1■■■□□ 2.25
LYSMD2-202ENST00000454181 TNNI3KQ59H18 835 aa29.1■■■□□ 2.25
LYSMD2-202ENST00000454181 SH3D19Q5HYK7 790 aa29.1■■■□□ 2.25
LYSMD2-202ENST00000454181 ZKSCAN2Q63HK3 967 aa29.1■■■□□ 2.25
LYSMD2-202ENST00000454181 TGFBRAP1Q8WUH2 860 aa29.1■■■□□ 2.25
LYSMD2-202ENST00000454181 PAK6Q9NQU5 681 aaPredicted RBP29.1■■■□□ 2.25
LYSMD2-202ENST00000454181 FPGT-TNNI3KV9GXZ4 949 aa29.1■■■□□ 2.25
LYSMD2-202ENST00000454181 ZBTB7BO15156 539 aaPredicted RBP29.09■■■□□ 2.25
LYSMD2-202ENST00000454181 FOXP4Q8IVH2 680 aaPredicted RBP29.09■■■□□ 2.25
LYSMD2-202ENST00000454181 MAPKAPK5Q8IW41 473 aa29.09■■■□□ 2.25
LYSMD2-202ENST00000454181 WDR18Q9BV38 432 aa29.09■■■□□ 2.25
LYSMD2-202ENST00000454181 SURF6O75683 361 aaKnown RBP29.08■■■□□ 2.25
LYSMD2-202ENST00000454181 HMGCRP04035 888 aa29.08■■■□□ 2.25
LYSMD2-202ENST00000454181 PPP4CP60510 307 aa29.08■■■□□ 2.25
LYSMD2-202ENST00000454181 TMEM57Q8N5G2 664 aa29.08■■■□□ 2.25
LYSMD2-202ENST00000454181 DBNDD2Q9BQY9 259 aa29.08■■■□□ 2.25
LYSMD2-202ENST00000454181 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.08■■■□□ 2.25
LYSMD2-202ENST00000454181 BACE1P56817 501 aa29.07■■■□□ 2.24
LYSMD2-202ENST00000454181 MTMR2Q13614 643 aa29.07■■■□□ 2.24
LYSMD2-202ENST00000454181 CRISPLD2Q9H0B8 497 aa29.07■■■□□ 2.24
LYSMD2-202ENST00000454181 NECAB2Q7Z6G3 386 aa29.06■■■□□ 2.24
LYSMD2-202ENST00000454181 PAWRQ96IZ0 340 aaKnown RBP29.06■■■□□ 2.24
LYSMD2-202ENST00000454181 C19orf81C9J6K1 198 aa29.05■■■□□ 2.24
LYSMD2-202ENST00000454181 IGSF3O75054 1194 aa29.05■■■□□ 2.24
LYSMD2-202ENST00000454181 HLA-DOAP06340 250 aa29.05■■■□□ 2.24
LYSMD2-202ENST00000454181 ATP8B2P98198 1209 aa29.05■■■□□ 2.24
LYSMD2-202ENST00000454181 POLA2Q14181 598 aa29.05■■■□□ 2.24
LYSMD2-202ENST00000454181 HMX1Q9NP08 348 aaPredicted RBP29.05■■■□□ 2.24
LYSMD2-202ENST00000454181 GINM1Q9NU53 330 aa29.05■■■□□ 2.24
LYSMD2-202ENST00000454181 FLT1P17948 1338 aa29.04■■■□□ 2.24
LYSMD2-202ENST00000454181 CYP2E1P05181 493 aaPredicted RBP29.04■■■□□ 2.24
LYSMD2-202ENST00000454181 CCAR1Q8IX12 1150 aaKnown RBP29.04■■■□□ 2.24
LYSMD2-202ENST00000454181 SSH3Q8TE77 659 aa29.04■■■□□ 2.24
LYSMD2-202ENST00000454181 MORF4L1Q9UBU8 362 aa29.04■■■□□ 2.24
LYSMD2-202ENST00000454181 GJD2Q9UKL4 321 aa29.04■■■□□ 2.24
LYSMD2-202ENST00000454181 PALD1Q9ULE6 856 aa29.04■■■□□ 2.24
LYSMD2-202ENST00000454181 RPTORQ8N122 1335 aa29.03■■■□□ 2.24
LYSMD2-202ENST00000454181 USP17L10C9JJH3 530 aa29.03■■■□□ 2.24
LYSMD2-202ENST00000454181 FTSJ3Q8IY81 847 aaKnown RBP29.03■■■□□ 2.24
LYSMD2-202ENST00000454181 ZNF512BQ96KM6 892 aaPredicted RBP29.03■■■□□ 2.24
LYSMD2-202ENST00000454181 HOXA7P31268 230 aaPredicted RBP29.02■■■□□ 2.24
LYSMD2-202ENST00000454181 ANKLE1Q8NAG6 615 aa29.02■■■□□ 2.24
LYSMD2-202ENST00000454181 GPRC5AQ8NFJ5 357 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms