RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.06□□□□□ -0.8
COPS7B-216ENST00000452375 CLEC10AQ8IUN9 316 aa10.06□□□□□ -0.8
COPS7B-216ENST00000452375 FAM83CQ9BQN1 747 aa10.06□□□□□ -0.8
COPS7B-216ENST00000452375 RNF208Q9H0X6 261 aa10.06□□□□□ -0.8
COPS7B-216ENST00000452375 WDR64B1ANS9 1081 aa10.05□□□□□ -0.8
COPS7B-216ENST00000452375 PDE2AO00408 941 aaPredicted RBP10.05□□□□□ -0.8
COPS7B-216ENST00000452375 GAS2O43903 313 aaKnown RBP10.05□□□□□ -0.8
COPS7B-216ENST00000452375 SPINK2P20155 84 aa10.05□□□□□ -0.8
COPS7B-216ENST00000452375 XPCQ01831 940 aaPredicted RBP10.05□□□□□ -0.8
COPS7B-216ENST00000452375 ANKRD34AQ69YU3 496 aa10.05□□□□□ -0.8
COPS7B-216ENST00000452375 INTS5Q6P9B9 1019 aaKnown RBP10.05□□□□□ -0.8
COPS7B-216ENST00000452375 MFSD14AQ96MC6 490 aa10.05□□□□□ -0.8
COPS7B-216ENST00000452375 GGNBP2Q9H3C7 697 aa10.05□□□□□ -0.8
COPS7B-216ENST00000452375 DZANK1Q9NVP4 752 aa10.05□□□□□ -0.8
COPS7B-216ENST00000452375 ROBO2Q9HCK4 1378 aa10.04□□□□□ -0.8
COPS7B-216ENST00000452375 BTBD11A6QL63 1104 aa10.04□□□□□ -0.8
COPS7B-216ENST00000452375 NFKBIEO00221 500 aa10.04□□□□□ -0.8
COPS7B-216ENST00000452375 R3HDM1Q15032 1099 aaKnown RBP10.04□□□□□ -0.8
COPS7B-216ENST00000452375 TTC16Q8NEE8 873 aa10.04□□□□□ -0.8
COPS7B-216ENST00000452375 IQGAP3Q86VI3 1631 aa10.04□□□□□ -0.8
COPS7B-216ENST00000452375 KRT27Q7Z3Y8 459 aa10.03□□□□□ -0.8
COPS7B-216ENST00000452375 KRTAP9-9Q9BYP9 154 aa10.03□□□□□ -0.8
COPS7B-216ENST00000452375 KRTAP9-4Q9BYQ2 154 aa10.03□□□□□ -0.8
COPS7B-216ENST00000452375 OSGEPQ9NPF4 335 aa10.03□□□□□ -0.8
COPS7B-216ENST00000452375 PCSK2P16519 638 aa10.02□□□□□ -0.81
COPS7B-216ENST00000452375 TXKP42681 527 aa10.02□□□□□ -0.81
COPS7B-216ENST00000452375 ARL4DP49703 201 aa10.02□□□□□ -0.81
COPS7B-216ENST00000452375 SGO2Q562F6 1265 aa10.02□□□□□ -0.81
COPS7B-216ENST00000452375 FBXL6Q8N531 539 aa10.02□□□□□ -0.81
COPS7B-216ENST00000452375 USP26Q9BXU7 913 aa10.02□□□□□ -0.81
COPS7B-216ENST00000452375 NPHP3Q7Z494 1330 aa10.02□□□□□ -0.81
COPS7B-216ENST00000452375 PDGFAP04085 211 aa10.01□□□□□ -0.81
COPS7B-216ENST00000452375 HOXA10P31260 410 aaPredicted RBP10.01□□□□□ -0.81
COPS7B-216ENST00000452375 C19orf57Q0VDD7 668 aa10.01□□□□□ -0.81
COPS7B-216ENST00000452375 DTX1Q86Y01 620 aa10.01□□□□□ -0.81
COPS7B-216ENST00000452375 WNT8BQ93098 351 aa10.01□□□□□ -0.81
COPS7B-216ENST00000452375 PBXIP1Q96AQ6 731 aa10.01□□□□□ -0.81
COPS7B-216ENST00000452375 SOX13Q9UN79 622 aa10.01□□□□□ -0.81
COPS7B-216ENST00000452375 WNT11O96014 354 aa10□□□□□ -0.81
COPS7B-216ENST00000452375 MPSTP25325 297 aa10□□□□□ -0.81
COPS7B-216ENST00000452375 VPS72Q15906 364 aa10□□□□□ -0.81
COPS7B-216ENST00000452375 NOM1Q5C9Z4 860 aaKnown RBP10□□□□□ -0.81
COPS7B-216ENST00000452375 HELQQ8TDG4 1101 aa10□□□□□ -0.81
COPS7B-216ENST00000452375 OSMRQ99650 979 aa10□□□□□ -0.81
COPS7B-216ENST00000452375 CHRDQ9H2X0 955 aa10□□□□□ -0.81
COPS7B-216ENST00000452375 RNF114Q9Y508 228 aa10□□□□□ -0.81
COPS7B-216ENST00000452375 NEXMIFQ5QGS0 1516 aa9.99□□□□□ -0.81
COPS7B-216ENST00000452375 RPLP1P05386 114 aaKnown RBP9.99□□□□□ -0.81
COPS7B-216ENST00000452375 MAP4P27816 1152 aaKnown RBP9.99□□□□□ -0.81
COPS7B-216ENST00000452375 MTMR3Q13615 1198 aa9.99□□□□□ -0.81
COPS7B-216ENST00000452375 ZNF326Q5BKZ1 582 aaKnown RBP9.99□□□□□ -0.81
COPS7B-216ENST00000452375 C12orf50Q8NA57 414 aaPredicted RBP9.99□□□□□ -0.81
COPS7B-216ENST00000452375 ASAP3Q8TDY4 903 aa9.99□□□□□ -0.81
COPS7B-216ENST00000452375 ZKSCAN3Q9BRR0 538 aa9.99□□□□□ -0.81
COPS7B-216ENST00000452375 USP32Q8NFA0 1604 aa9.99□□□□□ -0.81
COPS7B-216ENST00000452375 SOX1O00570 391 aaPredicted RBP9.98□□□□□ -0.81
COPS7B-216ENST00000452375 EREGO14944 169 aa9.98□□□□□ -0.81
COPS7B-216ENST00000452375 EIF1AXP47813 144 aaKnown RBP9.98□□□□□ -0.81
COPS7B-216ENST00000452375 AAMPQ13685 434 aa9.98□□□□□ -0.81
COPS7B-216ENST00000452375 IKBKEQ14164 716 aa9.98□□□□□ -0.81
COPS7B-216ENST00000452375 NUTM2GQ5VZR2 741 aa9.98□□□□□ -0.81
COPS7B-216ENST00000452375 CCDC97Q96F63 343 aaPredicted RBP9.98□□□□□ -0.81
COPS7B-216ENST00000452375 HIF3AQ9Y2N7 669 aa9.98□□□□□ -0.81
COPS7B-216ENST00000452375 PRAG1Q86YV5 1406 aa9.98□□□□□ -0.81
COPS7B-216ENST00000452375 PLCH1Q4KWH8 1693 aa9.97□□□□□ -0.81
COPS7B-216ENST00000452375 XKR5Q6UX68 686 aa9.97□□□□□ -0.81
COPS7B-216ENST00000452375 TMEM102Q8N9M5 508 aaPredicted RBP9.97□□□□□ -0.81
COPS7B-216ENST00000452375 FMNL2Q96PY5 1086 aa9.97□□□□□ -0.81
COPS7B-216ENST00000452375 POLIQ9UNA4 740 aa9.97□□□□□ -0.81
COPS7B-216ENST00000452375 CCDC9Q9Y3X0 531 aaKnown RBP9.97□□□□□ -0.81
COPS7B-216ENST00000452375 SPATA31A3Q5VYP0 1347 aa9.97□□□□□ -0.81
COPS7B-216ENST00000452375 RGPD1P0DJD0 1748 aa9.96□□□□□ -0.81
COPS7B-216ENST00000452375 TNS1Q9HBL0 1735 aaKnown RBP9.96□□□□□ -0.81
COPS7B-216ENST00000452375 MZF1P28698 734 aaPredicted RBP9.96□□□□□ -0.82
COPS7B-216ENST00000452375 EZH2Q15910 746 aaKnown RBP9.96□□□□□ -0.82
COPS7B-216ENST00000452375 GTF3C2Q8WUA4 911 aaPredicted RBP9.96□□□□□ -0.82
COPS7B-216ENST00000452375 BSNDQ8WZ55 320 aa9.96□□□□□ -0.82
COPS7B-216ENST00000452375 NXPE3Q969Y0 559 aa9.96□□□□□ -0.82
COPS7B-216ENST00000452375 ATG3Q9NT62 314 aa9.96□□□□□ -0.82
COPS7B-216ENST00000452375 PIM2Q9P1W9 311 aa9.96□□□□□ -0.82
COPS7B-216ENST00000452375 DISP2A7MBM2 1401 aa9.96□□□□□ -0.82
COPS7B-216ENST00000452375 CDC42BPGQ6DT37 1551 aa9.96□□□□□ -0.82
COPS7B-216ENST00000452375 NWD2Q9ULI1 1742 aa9.96□□□□□ -0.82
COPS7B-216ENST00000452375 DRD2P14416 443 aa9.95□□□□□ -0.82
COPS7B-216ENST00000452375 NFKBIBQ15653 356 aa9.95□□□□□ -0.82
COPS7B-216ENST00000452375 VN1R5Q7Z5H4 357 aa9.95□□□□□ -0.82
COPS7B-216ENST00000452375 SHISA5Q8N114 240 aa9.95□□□□□ -0.82
COPS7B-216ENST00000452375 FOXD3Q9UJU5 478 aaPredicted RBP9.95□□□□□ -0.82
COPS7B-216ENST00000452375 NUP155O75694 1391 aa9.95□□□□□ -0.82
COPS7B-216ENST00000452375 HFM1A2PYH4 1435 aa9.95□□□□□ -0.82
COPS7B-216ENST00000452375 PHACTR2O75167 634 aa9.94□□□□□ -0.82
COPS7B-216ENST00000452375 F13BP05160 661 aa9.94□□□□□ -0.82
COPS7B-216ENST00000452375 FAM50AQ14320 339 aaKnown RBP9.94□□□□□ -0.82
COPS7B-216ENST00000452375 PMEPA1Q969W9 287 aa9.94□□□□□ -0.82
COPS7B-216ENST00000452375 CAMKK2Q96RR4 588 aa9.94□□□□□ -0.82
COPS7B-216ENST00000452375 OSBPL1AQ9BXW6 950 aa9.94□□□□□ -0.82
COPS7B-216ENST00000452375 LATS2Q9NRM7 1088 aa9.94□□□□□ -0.82
COPS7B-216ENST00000452375 LEMD3Q9Y2U8 911 aa9.94□□□□□ -0.82
COPS7B-216ENST00000452375 CLTCL1P53675 1640 aa9.93□□□□□ -0.82
COPS7B-216ENST00000452375 UTRNP46939 3433 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms