RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ZNF384Q8TF68 577 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 NSUN4Q96CB9 384 aaKnown RBP13.43□□□□□ -0.26
USP1-204ENST00000452143 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 HMG20BQ9P0W2 317 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 PNMA3Q9UL41 463 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 AGTPBP1Q9UPW5 1226 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 SIPA1L1O43166 1804 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 TRIM75PA6NK02 468 aa13.42□□□□□ -0.26
USP1-204ENST00000452143 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
USP1-204ENST00000452143 GJA8P48165 433 aa13.42□□□□□ -0.26
USP1-204ENST00000452143 GORABQ5T7V8 394 aa13.42□□□□□ -0.26
USP1-204ENST00000452143 PROCA1Q8NCQ7 364 aaPredicted RBP13.42□□□□□ -0.26
USP1-204ENST00000452143 NEUROD6Q96NK8 337 aa13.42□□□□□ -0.26
USP1-204ENST00000452143 OSBPL5Q9H0X9 879 aaPredicted RBP13.42□□□□□ -0.26
USP1-204ENST00000452143 SZT2Q5T011 3432 aa13.41□□□□□ -0.26
USP1-204ENST00000452143 DOCK3Q8IZD9 2030 aa13.41□□□□□ -0.26
USP1-204ENST00000452143 UQCRFS1P1P0C7P4 283 aa13.41□□□□□ -0.26
USP1-204ENST00000452143 CCL5P13501 91 aa13.41□□□□□ -0.26
USP1-204ENST00000452143 CAPN2P17655 700 aa13.41□□□□□ -0.26
USP1-204ENST00000452143 IRF5Q13568 498 aa13.41□□□□□ -0.26
USP1-204ENST00000452143 PI16Q6UXB8 463 aa13.41□□□□□ -0.26
USP1-204ENST00000452143 PXYLP1Q8TE99 480 aa13.41□□□□□ -0.26
USP1-204ENST00000452143 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.41□□□□□ -0.26
USP1-204ENST00000452143 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.41□□□□□ -0.26
USP1-204ENST00000452143 PNMA6EA0A0J9YXQ4 647 aa13.4□□□□□ -0.26
USP1-204ENST00000452143 TNPO2O14787 897 aaKnown RBP13.4□□□□□ -0.26
USP1-204ENST00000452143 IGSF3O75054 1194 aa13.4□□□□□ -0.26
USP1-204ENST00000452143 MCAMP43121 646 aa13.4□□□□□ -0.26
USP1-204ENST00000452143 FXR1P51114 621 aaKnown RBP eCLIP13.4□□□□□ -0.26
USP1-204ENST00000452143 G3BP1Q13283 466 aaKnown RBP eCLIP13.4□□□□□ -0.26
USP1-204ENST00000452143 FAM110CQ1W6H9 321 aa13.4□□□□□ -0.26
USP1-204ENST00000452143 UBE2Q1Q7Z7E8 422 aa13.4□□□□□ -0.26
USP1-204ENST00000452143 HTATIP2Q9BUP3 242 aa13.4□□□□□ -0.26
USP1-204ENST00000452143 RNF208Q9H0X6 261 aa13.4□□□□□ -0.26
USP1-204ENST00000452143 GPR108Q9NPR9 543 aa13.4□□□□□ -0.26
USP1-204ENST00000452143 RAI14Q9P0K7 980 aa13.4□□□□□ -0.26
USP1-204ENST00000452143 BIN2Q9UBW5 565 aaPredicted RBP13.4□□□□□ -0.26
USP1-204ENST00000452143 HERC5Q9UII4 1024 aaKnown RBP13.4□□□□□ -0.26
USP1-204ENST00000452143 MYO5AQ9Y4I1 1855 aaKnown RBP13.4□□□□□ -0.26
USP1-204ENST00000452143 H0YGN5 161 aa13.39□□□□□ -0.27
USP1-204ENST00000452143 ADCY3O60266 1144 aa13.39□□□□□ -0.27
USP1-204ENST00000452143 FLT3LGP49771 235 aa13.39□□□□□ -0.27
USP1-204ENST00000452143 PABPC4Q13310 644 aaKnown RBP eCLIP13.39□□□□□ -0.27
USP1-204ENST00000452143 ZNF280CQ8ND82 737 aa13.39□□□□□ -0.27
USP1-204ENST00000452143 FRAT1Q92837 279 aaPredicted RBP13.39□□□□□ -0.27
USP1-204ENST00000452143 NOL10Q9BSC4 688 aaKnown RBP13.39□□□□□ -0.27
USP1-204ENST00000452143 LRP2BPQ9P2M1 347 aa13.39□□□□□ -0.27
USP1-204ENST00000452143 GABRQQ9UN88 632 aa13.39□□□□□ -0.27
USP1-204ENST00000452143 COLQQ9Y215 455 aaPredicted RBP13.39□□□□□ -0.27
USP1-204ENST00000452143 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
USP1-204ENST00000452143 BAG3O95817 575 aa13.38□□□□□ -0.27
USP1-204ENST00000452143 SLURP2P0DP57 97 aa13.38□□□□□ -0.27
USP1-204ENST00000452143 PLCG2P16885 1265 aa13.38□□□□□ -0.27
USP1-204ENST00000452143 CAP2P40123 477 aa13.38□□□□□ -0.27
USP1-204ENST00000452143 GCLCP48506 637 aaPredicted RBP13.38□□□□□ -0.27
USP1-204ENST00000452143 TREML2Q5T2D2 321 aa13.38□□□□□ -0.27
USP1-204ENST00000452143 TBC1D9Q6ZT07 1266 aa13.38□□□□□ -0.27
USP1-204ENST00000452143 TEX11Q8IYF3 940 aa13.38□□□□□ -0.27
USP1-204ENST00000452143 ANKRD13CQ8N6S4 541 aa13.38□□□□□ -0.27
USP1-204ENST00000452143 U2AF1L4Q8WU68 220 aaKnown RBP13.38□□□□□ -0.27
USP1-204ENST00000452143 COA7Q96BR5 231 aa13.38□□□□□ -0.27
USP1-204ENST00000452143 DHX36Q9H2U1 1008 aaKnown RBP13.38□□□□□ -0.27
USP1-204ENST00000452143 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.38□□□□□ -0.27
USP1-204ENST00000452143 BCAR3O75815 825 aa13.37□□□□□ -0.27
USP1-204ENST00000452143 INHAP05111 366 aa13.37□□□□□ -0.27
USP1-204ENST00000452143 SPP2Q13103 211 aa13.37□□□□□ -0.27
USP1-204ENST00000452143 SH3D19Q5HYK7 790 aa13.37□□□□□ -0.27
USP1-204ENST00000452143 CCDC158Q5M9N0 1113 aa13.37□□□□□ -0.27
USP1-204ENST00000452143 ZKSCAN2Q63HK3 967 aa13.37□□□□□ -0.27
USP1-204ENST00000452143 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
USP1-204ENST00000452143 CCDC84Q86UT8 332 aaPredicted RBP13.37□□□□□ -0.27
USP1-204ENST00000452143 CLUAP1Q96AJ1 413 aa13.37□□□□□ -0.27
USP1-204ENST00000452143 ZNF512BQ96KM6 892 aaPredicted RBP13.37□□□□□ -0.27
USP1-204ENST00000452143 UNC93B1Q9H1C4 597 aa13.37□□□□□ -0.27
USP1-204ENST00000452143 AS3MTQ9HBK9 375 aa13.37□□□□□ -0.27
USP1-204ENST00000452143 PI4KBQ9UBF8 816 aa13.37□□□□□ -0.27
USP1-204ENST00000452143 USP17L5A8MUK1 530 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 FARP2O94887 1054 aaPredicted RBP13.36□□□□□ -0.27
USP1-204ENST00000452143 SGPL1O95470 568 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 ELNP15502 786 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 HMGCS2P54868 508 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 TNNI3KQ59H18 835 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 TTC39AQ5SRH9 613 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 TMEM57Q8N5G2 664 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 SSH3Q8TE77 659 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 SH3RF3Q8TEJ3 882 aaPredicted RBP13.36□□□□□ -0.27
USP1-204ENST00000452143 DPF3Q92784 378 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 PAK6Q9NQU5 681 aaPredicted RBP13.36□□□□□ -0.27
USP1-204ENST00000452143 GINM1Q9NU53 330 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 TNNQ9UQP3 1299 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 FPGT-TNNI3KV9GXZ4 949 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 MYH1P12882 1939 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 PLXNB2O15031 1838 aa13.36□□□□□ -0.27
USP1-204ENST00000452143 LAMA3Q16787 3333 aa13.35□□□□□ -0.27
USP1-204ENST00000452143 ASNSP08243 561 aa13.35□□□□□ -0.27
USP1-204ENST00000452143 PPP4CP60510 307 aa13.35□□□□□ -0.27
USP1-204ENST00000452143 METTL16Q86W50 562 aaKnown RBP13.35□□□□□ -0.27
USP1-204ENST00000452143 WDR18Q9BV38 432 aa13.35□□□□□ -0.27
USP1-204ENST00000452143 AATFQ9NY61 560 aaKnown RBP eCLIP13.35□□□□□ -0.27
USP1-204ENST00000452143 NR2E3Q9Y5X4 410 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms