RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 FGRP09769 529 aa17.74■□□□□ 0.43
CCHCR1-208ENST00000451521 FTOQ9C0B1 505 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCHCR1-208ENST00000451521 CLSTN2Q9H4D0 955 aa17.74■□□□□ 0.43
CCHCR1-208ENST00000451521 STK36Q9NRP7 1315 aa17.74■□□□□ 0.43
CCHCR1-208ENST00000451521 RXRAP19793 462 aa17.74■□□□□ 0.43
CCHCR1-208ENST00000451521 MAP3K11Q16584 847 aa17.74■□□□□ 0.43
CCHCR1-208ENST00000451521 BICD2Q8TD16 824 aa17.74■□□□□ 0.43
CCHCR1-208ENST00000451521 GPR101Q96P66 508 aaPredicted RBP17.74■□□□□ 0.43
CCHCR1-208ENST00000451521 LAMB1P07942 1786 aa17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 NR1I2O75469 434 aa17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 WTAPQ15007 396 aa17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 RRP12Q5JTH9 1297 aaKnown RBP17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 MSL1Q68DK7 614 aa17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 XDHP47989 1333 aa17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 DLEC1Q9Y238 1755 aa17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 KIF23Q02241 960 aaPredicted RBP17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 CEBPZQ03701 1054 aaKnown RBP17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 ALG1Q9BT22 464 aa17.73■□□□□ 0.43
CCHCR1-208ENST00000451521 MINDY4BA8MYZ0 360 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 RANBP6O60518 1105 aaKnown RBP17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 SERPINB2P05120 415 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 CCDC192P0DO97 292 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 PRDX5P30044 214 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 SYNE3Q6ZMZ3 975 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 ESR2Q92731 530 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 TNMDQ9H2S6 317 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 ANKIB1Q9P2G1 1089 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 TPM3P06753 285 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 IARSP41252 1262 aaKnown RBP17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 SEC23AQ15436 765 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 SPTY2D1Q68D10 685 aaPredicted RBP17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 CTR9Q6PD62 1173 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 SPC24Q8NBT2 197 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 TDRD7Q8NHU6 1098 aaKnown RBP17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 MYL10Q9BUA6 226 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 TOMM22Q9NS69 142 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 GJB4Q9NTQ9 266 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 POLR3EQ9NVU0 708 aa17.72■□□□□ 0.43
CCHCR1-208ENST00000451521 MYH2Q9UKX2 1941 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 ERICH2A1L162 156 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 IFNAR1P17181 557 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 HMGB2P26583 209 aaKnown RBP17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 ST5P78524 1137 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 DDR1Q08345 913 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 MYSM1Q5VVJ2 828 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 KIF28PB7ZC32 967 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 FMNL1O95466 1100 aaPredicted RBP17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 CCDC144CPQ8IYA2 1237 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 PHKBQ93100 1093 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 FEZ1Q99689 392 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 ZKSCAN3Q9BRR0 538 aa17.71■□□□□ 0.43
CCHCR1-208ENST00000451521 YEATS4O95619 227 aa17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 CAMK4Q16566 473 aa17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 LINC00301Q8NCQ3 95 aa17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 AIFM3Q96NN9 605 aa17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 CRNKL1Q9BZJ0 848 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 ATP8A2Q9NTI2 1148 aa17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 SMIM22K7EJ46 135 aa17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 CDK11BP21127 795 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 TAF3Q5VWG9 929 aa17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 KRT40Q6A162 431 aa17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 ZNF771Q7L3S4 317 aaPredicted RBP17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 CCAR1Q8IX12 1150 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 WDR66Q8TBY9 1149 aa17.7■□□□□ 0.42
CCHCR1-208ENST00000451521 SSRP1Q08945 709 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 NCBP1Q09161 790 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 RBM17Q96I25 401 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 UBAC1Q9BSL1 405 aa17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 DCP1AQ9NPI6 582 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 AATFQ9NY61 560 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 KLRG2A4D1S0 409 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 POLR3DP05423 398 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 HOXA10P31260 410 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 RTN1Q16799 776 aa17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 SBK1Q52WX2 424 aa17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 COL23A1Q86Y22 540 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 STK11IPQ8N1F8 1099 aa17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 ENGASEQ8NFI3 743 aa17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 GOLPH3LQ9H4A5 285 aa17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 CLIC4Q9Y696 253 aa17.69■□□□□ 0.42
CCHCR1-208ENST00000451521 A0A1W2PQ27 194 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 A0A1W2PQ64 194 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 A0A1W2PQD8 194 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 GPSM2P81274 684 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 TYRO3Q06418 890 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 SNW1Q13573 536 aaKnown RBP17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 PPP2R5BQ15173 497 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 ADALQ6DHV7 355 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 PAXIP1Q6ZW49 1069 aaPredicted RBP17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 ZNF804AQ7Z570 1209 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 NBPF11Q86T75 865 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 ZNF654Q8IZM8 581 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 KCNG4Q8TDN1 519 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 WASF1Q92558 559 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 OGFRQ9NZT2 677 aa17.68■□□□□ 0.42
CCHCR1-208ENST00000451521 PCDHA7Q9UN72 937 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms