RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 SPATA5Q8NB90 893 aa21.11■□□□□ 0.97
PTPRN-209ENST00000451506 PROCA1Q8NCQ7 364 aaPredicted RBP21.11■□□□□ 0.97
PTPRN-209ENST00000451506 NEUROD6Q96NK8 337 aa21.11■□□□□ 0.97
PTPRN-209ENST00000451506 PAK6Q9NQU5 681 aaPredicted RBP21.11■□□□□ 0.97
PTPRN-209ENST00000451506 NR2E3Q9Y5X4 410 aa21.11■□□□□ 0.97
PTPRN-209ENST00000451506 LDHCP07864 332 aa21.1■□□□□ 0.97
PTPRN-209ENST00000451506 CAPN2P17655 700 aa21.1■□□□□ 0.97
PTPRN-209ENST00000451506 GSTO1P78417 241 aa21.1■□□□□ 0.97
PTPRN-209ENST00000451506 SPP2Q13103 211 aa21.1■□□□□ 0.97
PTPRN-209ENST00000451506 FAM110CQ1W6H9 321 aa21.1■□□□□ 0.97
PTPRN-209ENST00000451506 COA7Q96BR5 231 aa21.1■□□□□ 0.97
PTPRN-209ENST00000451506 DEFB118Q96PH6 123 aa21.1■□□□□ 0.97
PTPRN-209ENST00000451506 PNMA3Q9UL41 463 aa21.1■□□□□ 0.97
PTPRN-209ENST00000451506 ARID4AP29374 1257 aaPredicted RBP21.09■□□□□ 0.97
PTPRN-209ENST00000451506 RRP1BQ14684 758 aaKnown RBP21.09■□□□□ 0.97
PTPRN-209ENST00000451506 ZNF280CQ8ND82 737 aa21.09■□□□□ 0.97
PTPRN-209ENST00000451506 CRISPLD2Q9H0B8 497 aa21.09■□□□□ 0.97
PTPRN-209ENST00000451506 LOC285556D6RIA3 1793 aa21.09■□□□□ 0.97
PTPRN-209ENST00000451506 TFRCP02786 760 aaKnown RBP21.08■□□□□ 0.97
PTPRN-209ENST00000451506 CAP2P40123 477 aa21.08■□□□□ 0.97
PTPRN-209ENST00000451506 TBC1D2Q9BYX2 928 aa21.08■□□□□ 0.97
PTPRN-209ENST00000451506 MCAMP43121 646 aa21.07■□□□□ 0.96
PTPRN-209ENST00000451506 GCLCP48506 637 aaPredicted RBP21.07■□□□□ 0.96
PTPRN-209ENST00000451506 HMGCS2P54868 508 aa21.07■□□□□ 0.96
PTPRN-209ENST00000451506 GORABQ5T7V8 394 aa21.07■□□□□ 0.96
PTPRN-209ENST00000451506 RAI14Q9P0K7 980 aa21.07■□□□□ 0.96
PTPRN-209ENST00000451506 TAOK2Q9UL54 1235 aa21.07■□□□□ 0.96
PTPRN-209ENST00000451506 PNMA6EA0A0J9YXQ4 647 aa21.06■□□□□ 0.96
PTPRN-209ENST00000451506 SH3D19Q5HYK7 790 aa21.06■□□□□ 0.96
PTPRN-209ENST00000451506 TEX11Q8IYF3 940 aa21.06■□□□□ 0.96
PTPRN-209ENST00000451506 USP17L5A8MUK1 530 aa21.05■□□□□ 0.96
PTPRN-209ENST00000451506 EVI5O60447 810 aa21.05■□□□□ 0.96
PTPRN-209ENST00000451506 TRIM27P14373 513 aa21.05■□□□□ 0.96
PTPRN-209ENST00000451506 PABPC4Q13310 644 aaKnown RBP eCLIP21.05■□□□□ 0.96
PTPRN-209ENST00000451506 SH3RF3Q8TEJ3 882 aaPredicted RBP21.05■□□□□ 0.96
PTPRN-209ENST00000451506 ASCC2Q9H1I8 757 aaPredicted RBP21.05■□□□□ 0.96
PTPRN-209ENST00000451506 HERC5Q9UII4 1024 aaKnown RBP21.05■□□□□ 0.96
PTPRN-209ENST00000451506 GJD2Q9UKL4 321 aa21.05■□□□□ 0.96
PTPRN-209ENST00000451506 ATAD5Q96QE3 1844 aa21.04■□□□□ 0.96
PTPRN-209ENST00000451506 GNAI2P04899 355 aa21.04■□□□□ 0.96
PTPRN-209ENST00000451506 UQCRFS1P1P0C7P4 283 aa21.04■□□□□ 0.96
PTPRN-209ENST00000451506 PAWRQ96IZ0 340 aaKnown RBP21.04■□□□□ 0.96
PTPRN-209ENST00000451506 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.04■□□□□ 0.96
PTPRN-209ENST00000451506 LRP2BPQ9P2M1 347 aa21.04■□□□□ 0.96
PTPRN-209ENST00000451506 TNNQ9UQP3 1299 aa21.04■□□□□ 0.96
PTPRN-209ENST00000451506 A0A1W2PPC1 479 aa21.03■□□□□ 0.96
PTPRN-209ENST00000451506 G3BP1Q13283 466 aaKnown RBP eCLIP21.03■□□□□ 0.96
PTPRN-209ENST00000451506 AS3MTQ9HBK9 375 aa21.03■□□□□ 0.96
PTPRN-209ENST00000451506 PI4KBQ9UBF8 816 aa21.03■□□□□ 0.96
PTPRN-209ENST00000451506 DOCK3Q8IZD9 2030 aa21.03■□□□□ 0.96
PTPRN-209ENST00000451506 SIPA1L1O43166 1804 aa21.02■□□□□ 0.96
PTPRN-209ENST00000451506 HMGCRP04035 888 aa21.02■□□□□ 0.96
PTPRN-209ENST00000451506 DIS3LQ8TF46 1054 aaKnown RBP21.02■□□□□ 0.96
PTPRN-209ENST00000451506 WDR18Q9BV38 432 aa21.02■□□□□ 0.96
PTPRN-209ENST00000451506 DHX36Q9H2U1 1008 aaKnown RBP21.02■□□□□ 0.96
PTPRN-209ENST00000451506 MORF4L1Q9UBU8 362 aa21.02■□□□□ 0.96
PTPRN-209ENST00000451506 IPO8O15397 1037 aaKnown RBP21.01■□□□□ 0.95
PTPRN-209ENST00000451506 JAG1P78504 1218 aa21.01■□□□□ 0.95
PTPRN-209ENST00000451506 ATF7IPQ6VMQ6 1270 aa21.01■□□□□ 0.95
PTPRN-209ENST00000451506 NECAB2Q7Z6G3 386 aa21.01■□□□□ 0.95
PTPRN-209ENST00000451506 METTL16Q86W50 562 aaKnown RBP21.01■□□□□ 0.95
PTPRN-209ENST00000451506 ANKLE1Q8NAG6 615 aa21.01■□□□□ 0.95
PTPRN-209ENST00000451506 DNAJC18Q9H819 358 aa21.01■□□□□ 0.95
PTPRN-209ENST00000451506 AATFQ9NY61 560 aaKnown RBP eCLIP21.01■□□□□ 0.95
PTPRN-209ENST00000451506 BACE1P56817 501 aa21■□□□□ 0.95
PTPRN-209ENST00000451506 PPP4CP60510 307 aa21■□□□□ 0.95
PTPRN-209ENST00000451506 TRIM32Q13049 653 aa21■□□□□ 0.95
PTPRN-209ENST00000451506 MTMR2Q13614 643 aa21■□□□□ 0.95
PTPRN-209ENST00000451506 NAA16Q6N069 864 aaPredicted RBP21■□□□□ 0.95
PTPRN-209ENST00000451506 ADGRA1Q86SQ6 560 aa21■□□□□ 0.95
PTPRN-209ENST00000451506 NOL10Q9BSC4 688 aaKnown RBP21■□□□□ 0.95
PTPRN-209ENST00000451506 GPR108Q9NPR9 543 aa21■□□□□ 0.95
PTPRN-209ENST00000451506 SNRKQ9NRH2 765 aa21■□□□□ 0.95
PTPRN-209ENST00000451506 RPTORQ8N122 1335 aa21■□□□□ 0.95
PTPRN-209ENST00000451506 BAG3O95817 575 aa20.99■□□□□ 0.95
PTPRN-209ENST00000451506 ASNSP08243 561 aa20.99■□□□□ 0.95
PTPRN-209ENST00000451506 PLCG2P16885 1265 aa20.99■□□□□ 0.95
PTPRN-209ENST00000451506 HOXA7P31268 230 aaPredicted RBP20.99■□□□□ 0.95
PTPRN-209ENST00000451506 TGFBRAP1Q8WUH2 860 aa20.99■□□□□ 0.95
PTPRN-209ENST00000451506 HMX1Q9NP08 348 aaPredicted RBP20.99■□□□□ 0.95
PTPRN-209ENST00000451506 STAP2Q9UGK3 403 aa20.99■□□□□ 0.95
PTPRN-209ENST00000451506 ALPK3Q96L96 1907 aa20.99■□□□□ 0.95
PTPRN-209ENST00000451506 MAST2Q6P0Q8 1798 aa20.99■□□□□ 0.95
PTPRN-209ENST00000451506 FLT1P17948 1338 aa20.99■□□□□ 0.95
PTPRN-209ENST00000451506 PLXNB2O15031 1838 aa20.99■□□□□ 0.95
PTPRN-209ENST00000451506 SOX1O00570 391 aaPredicted RBP20.98■□□□□ 0.95
PTPRN-209ENST00000451506 BCAR3O75815 825 aa20.98■□□□□ 0.95
PTPRN-209ENST00000451506 MNX1P50219 401 aaPredicted RBP20.98■□□□□ 0.95
PTPRN-209ENST00000451506 POLA2Q14181 598 aa20.98■□□□□ 0.95
PTPRN-209ENST00000451506 SHROOM1Q2M3G4 852 aaPredicted RBP20.98■□□□□ 0.95
PTPRN-209ENST00000451506 TNNI3KQ59H18 835 aa20.98■□□□□ 0.95
PTPRN-209ENST00000451506 MAPKAPK5Q8IW41 473 aa20.98■□□□□ 0.95
PTPRN-209ENST00000451506 TRIB2Q92519 343 aa20.98■□□□□ 0.95
PTPRN-209ENST00000451506 CLUAP1Q96AJ1 413 aa20.98■□□□□ 0.95
PTPRN-209ENST00000451506 P2RX7Q99572 595 aaKnown RBP20.98■□□□□ 0.95
PTPRN-209ENST00000451506 DBNDD2Q9BQY9 259 aa20.98■□□□□ 0.95
PTPRN-209ENST00000451506 FPGT-TNNI3KV9GXZ4 949 aa20.98■□□□□ 0.95
PTPRN-209ENST00000451506 PEX10O60683 326 aa20.97■□□□□ 0.95
PTPRN-209ENST00000451506 CYP2E1P05181 493 aaPredicted RBP20.97■□□□□ 0.95
PTPRN-209ENST00000451506 IRX3P78415 501 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms