RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 MCM9Q9NXL9 1143 aa11.76□□□□□ -0.53
CCDC171-203ENST00000449575 APPP05067 770 aa11.76□□□□□ -0.53
CCDC171-203ENST00000449575 STK11IPQ8N1F8 1099 aa11.76□□□□□ -0.53
CCDC171-203ENST00000449575 DNAJC18Q9H819 358 aa11.76□□□□□ -0.53
CCDC171-203ENST00000449575 RPAP1Q9BWH6 1393 aaPredicted RBP11.76□□□□□ -0.53
CCDC171-203ENST00000449575 USP17L12C9JPN9 530 aa11.75□□□□□ -0.53
CCDC171-203ENST00000449575 USP17L21D6R901 530 aa11.75□□□□□ -0.53
CCDC171-203ENST00000449575 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
CCDC171-203ENST00000449575 HSPD1P10809 573 aaKnown RBP11.75□□□□□ -0.53
CCDC171-203ENST00000449575 BECN1Q14457 450 aa11.75□□□□□ -0.53
CCDC171-203ENST00000449575 SHROOM1Q2M3G4 852 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-203ENST00000449575 CTR9Q6PD62 1173 aa11.75□□□□□ -0.53
CCDC171-203ENST00000449575 IFNL3Q8IZI9 196 aa11.75□□□□□ -0.53
CCDC171-203ENST00000449575 PPP2R3BQ9Y5P8 575 aa11.75□□□□□ -0.53
CCDC171-203ENST00000449575 PATL2C9JE40 543 aaKnown RBP11.75□□□□□ -0.53
CCDC171-203ENST00000449575 USP2O75604 605 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-203ENST00000449575 PTH1RQ03431 593 aa11.75□□□□□ -0.53
CCDC171-203ENST00000449575 RRP1BQ14684 758 aaKnown RBP11.75□□□□□ -0.53
CCDC171-203ENST00000449575 C8orf34Q49A92 452 aa11.75□□□□□ -0.53
CCDC171-203ENST00000449575 DYNLL2Q96FJ2 89 aa11.75□□□□□ -0.53
CCDC171-203ENST00000449575 UBE2Q2LH0YL09 131 aa11.74□□□□□ -0.53
CCDC171-203ENST00000449575 HIP1O00291 1037 aa11.74□□□□□ -0.53
CCDC171-203ENST00000449575 SGSM2O43147 1006 aa11.74□□□□□ -0.53
CCDC171-203ENST00000449575 SLC44A5Q8NCS7 719 aa11.74□□□□□ -0.53
CCDC171-203ENST00000449575 ATP8A2Q9NTI2 1148 aa11.74□□□□□ -0.53
CCDC171-203ENST00000449575 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-203ENST00000449575 LAMA4Q16363 1823 aa11.74□□□□□ -0.53
CCDC171-203ENST00000449575 CERS3Q8IU89 383 aa11.74□□□□□ -0.53
CCDC171-203ENST00000449575 ESYT1Q9BSJ8 1104 aa11.74□□□□□ -0.53
CCDC171-203ENST00000449575 GBA2Q9HCG7 927 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-203ENST00000449575 ANGEL1Q9UNK9 670 aaKnown RBP11.74□□□□□ -0.53
CCDC171-203ENST00000449575 TACC3Q9Y6A5 838 aa11.74□□□□□ -0.53
CCDC171-203ENST00000449575 COL2A1P02458 1487 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-203ENST00000449575 CDC45O75419 566 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 FGAP02671 866 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 POLR3DP05423 398 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-203ENST00000449575 INPP5BP32019 993 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 APLP1P51693 650 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 TTLL12Q14166 644 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-203ENST00000449575 SUPT20HL1Q3ZLR7 823 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 TICAM2Q86XR7 235 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 CLMNQ96JQ2 1002 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 INCENPQ9NQS7 918 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 MINDY4BA8MYZ0 360 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 TDO2P48775 406 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 JAG1P78504 1218 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-203ENST00000449575 DOCK1Q14185 1865 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 PHIPQ8WWQ0 1821 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 TMEM88BA6NKF7 163 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 PHF20L1A8MW92 1017 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 GNAT2P19087 354 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 C12orf60Q5U649 245 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 NKX2-3Q8TAU0 364 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 KLRG1Q96E93 195 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 PI4KBQ9UBF8 816 aa11.73□□□□□ -0.53
CCDC171-203ENST00000449575 HAND2P61296 217 aa11.72□□□□□ -0.53
CCDC171-203ENST00000449575 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-203ENST00000449575 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
CCDC171-203ENST00000449575 NAPBQ9H115 298 aa11.72□□□□□ -0.53
CCDC171-203ENST00000449575 DHX36Q9H2U1 1008 aaKnown RBP11.72□□□□□ -0.53
CCDC171-203ENST00000449575 TAF6LQ9Y6J9 622 aa11.72□□□□□ -0.53
CCDC171-203ENST00000449575 NF2P35240 595 aa11.72□□□□□ -0.53
CCDC171-203ENST00000449575 MAP3K10Q02779 954 aa11.72□□□□□ -0.53
CCDC171-203ENST00000449575 CTDSPL2Q05D32 466 aa11.72□□□□□ -0.53
CCDC171-203ENST00000449575 GABPAQ06546 454 aa11.72□□□□□ -0.53
CCDC171-203ENST00000449575 CCDC84Q86UT8 332 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-203ENST00000449575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC171-203ENST00000449575 WRNIP1Q96S55 665 aa11.72□□□□□ -0.53
CCDC171-203ENST00000449575 NBPF3Q9H094 633 aa11.72□□□□□ -0.53
CCDC171-203ENST00000449575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC171-203ENST00000449575 ABT1Q9ULW3 272 aaKnown RBP11.72□□□□□ -0.53
CCDC171-203ENST00000449575 RAD50Q92878 1312 aa11.71□□□□□ -0.53
CCDC171-203ENST00000449575 GOLGA6L3A6NEY3 463 aa11.71□□□□□ -0.53
CCDC171-203ENST00000449575 HUNKP57058 714 aa11.71□□□□□ -0.53
CCDC171-203ENST00000449575 METTL16Q86W50 562 aaKnown RBP11.71□□□□□ -0.53
CCDC171-203ENST00000449575 C2orf69Q8N8R5 385 aa11.71□□□□□ -0.53
CCDC171-203ENST00000449575 RUFY2Q8WXA3 655 aa11.71□□□□□ -0.53
CCDC171-203ENST00000449575 LSG1Q9H089 658 aaKnown RBP11.71□□□□□ -0.53
CCDC171-203ENST00000449575 SERPINB13Q9UIV8 391 aa11.71□□□□□ -0.53
CCDC171-203ENST00000449575 PPP1R12BO60237 982 aaPredicted RBP11.71□□□□□ -0.54
CCDC171-203ENST00000449575 SHMT1P34896 483 aa11.71□□□□□ -0.54
CCDC171-203ENST00000449575 GIMAP6Q6P9H5 292 aa11.71□□□□□ -0.54
CCDC171-203ENST00000449575 CRACR2BQ8N4Y2 399 aaPredicted RBP11.71□□□□□ -0.54
CCDC171-203ENST00000449575 TLL2Q9Y6L7 1015 aa11.71□□□□□ -0.54
CCDC171-203ENST00000449575 PTPRFP10586 1907 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 PRDM1O75626 825 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 GDF11O95390 407 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 HLA-DOAP06340 250 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 VGLL4Q14135 290 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 SBK1Q52WX2 424 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 LDLRAD1Q5T700 205 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 TTC6Q86TZ1 520 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 ARPP21Q9UBL0 812 aaPredicted RBP11.7□□□□□ -0.54
CCDC171-203ENST00000449575 SEC24BO95487 1268 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 HSPA6P17066 643 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 PPARAQ07869 468 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 ALX1Q15699 326 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 MAP3K11Q16584 847 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms