RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 MGAMO43451 1857 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 DDTLA6NHG4 134 aaPredicted RBP8.45□□□□□ -1.06
PBRM1-216ENST00000449505 HLA-DOAP06340 250 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 ASNSP08243 561 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 CYP2C8P10632 490 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 MS4A1P11836 297 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 GCLCP48506 637 aaPredicted RBP8.45□□□□□ -1.06
PBRM1-216ENST00000449505 RHBDL3P58872 404 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 HNRNPUQ00839 825 aaKnown RBP eCLIP8.45□□□□□ -1.06
PBRM1-216ENST00000449505 MOGSQ13724 837 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 FAM110CQ1W6H9 321 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 TNNI3KQ59H18 835 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 ERC1Q8IUD2 1116 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 ITPRIPQ8IWB1 547 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 CRACR2BQ8N4Y2 399 aaPredicted RBP8.45□□□□□ -1.06
PBRM1-216ENST00000449505 COA7Q96BR5 231 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 ZNF512BQ96KM6 892 aaPredicted RBP8.45□□□□□ -1.06
PBRM1-216ENST00000449505 DDX4Q9NQI0 724 aaKnown RBP8.45□□□□□ -1.06
PBRM1-216ENST00000449505 GINM1Q9NU53 330 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 PI4KBQ9UBF8 816 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 FPGT-TNNI3KV9GXZ4 949 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 PHIPQ8WWQ0 1821 aa8.45□□□□□ -1.06
PBRM1-216ENST00000449505 CEP290O15078 2479 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 PNMA6EA0A0J9YXQ4 647 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 USP17L5A8MUK1 530 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 SURF6O75683 361 aaKnown RBP8.44□□□□□ -1.06
PBRM1-216ENST00000449505 BCAR3O75815 825 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 MYCP01106 439 aaPredicted RBP8.44□□□□□ -1.06
PBRM1-216ENST00000449505 GJB1P08034 283 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 MCAMP43121 646 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 CAP1Q01518 475 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 PRKCZQ05513 592 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 IRF5Q13568 498 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 POLA2Q14181 598 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 HSP90AB4PQ58FF6 505 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 GPAT2Q6NUI2 795 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 SH3BP5LQ7L8J4 393 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 ZFPM1Q8IX07 1006 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 TMEM57Q8N5G2 664 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 ZNF280CQ8ND82 737 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 SSH3Q8TE77 659 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 PXYLP1Q8TE99 480 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 GTF3C2Q8WUA4 911 aaPredicted RBP8.44□□□□□ -1.06
PBRM1-216ENST00000449505 TMOD4Q9NZQ9 345 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 FOCADQ5VW36 1801 aa8.44□□□□□ -1.06
PBRM1-216ENST00000449505 ADCY3O60266 1144 aa8.43□□□□□ -1.06
PBRM1-216ENST00000449505 CCL5P13501 91 aa8.43□□□□□ -1.06
PBRM1-216ENST00000449505 CAP2P40123 477 aa8.43□□□□□ -1.06
PBRM1-216ENST00000449505 GJA8P48165 433 aa8.43□□□□□ -1.06
PBRM1-216ENST00000449505 IRX3P78415 501 aaPredicted RBP8.43□□□□□ -1.06
PBRM1-216ENST00000449505 HABP4Q5JVS0 413 aaKnown RBP8.43□□□□□ -1.06
PBRM1-216ENST00000449505 PI16Q6UXB8 463 aa8.43□□□□□ -1.06
PBRM1-216ENST00000449505 CHRDL2Q6WN34 429 aa8.43□□□□□ -1.06
PBRM1-216ENST00000449505 TBC1D9Q6ZT07 1266 aa8.43□□□□□ -1.06
PBRM1-216ENST00000449505 RNF208Q9H0X6 261 aa8.43□□□□□ -1.06
PBRM1-216ENST00000449505 CHMP4BQ9H444 224 aaKnown RBP8.43□□□□□ -1.06
PBRM1-216ENST00000449505 AATFQ9NY61 560 aaKnown RBP eCLIP8.43□□□□□ -1.06
PBRM1-216ENST00000449505 NR2E3Q9Y5X4 410 aa8.43□□□□□ -1.06
PBRM1-216ENST00000449505 FLT1P17948 1338 aa8.43□□□□□ -1.06
PBRM1-216ENST00000449505 ECM2O94769 699 aaPredicted RBP8.42□□□□□ -1.06
PBRM1-216ENST00000449505 FARP2O94887 1054 aaPredicted RBP8.42□□□□□ -1.06
PBRM1-216ENST00000449505 FLT3LGP49771 235 aa8.42□□□□□ -1.06
PBRM1-216ENST00000449505 PPP4CP60510 307 aa8.42□□□□□ -1.06
PBRM1-216ENST00000449505 ATP8B2P98198 1209 aa8.42□□□□□ -1.06
PBRM1-216ENST00000449505 MAP3K12Q12852 859 aa8.42□□□□□ -1.06
PBRM1-216ENST00000449505 SPP2Q13103 211 aa8.42□□□□□ -1.06
PBRM1-216ENST00000449505 FOXP4Q8IVH2 680 aaPredicted RBP8.42□□□□□ -1.06
PBRM1-216ENST00000449505 ANKRD13CQ8N6S4 541 aa8.42□□□□□ -1.06
PBRM1-216ENST00000449505 SH3RF3Q8TEJ3 882 aaPredicted RBP8.42□□□□□ -1.06
PBRM1-216ENST00000449505 SOCS4Q8WXH5 440 aa8.42□□□□□ -1.06
PBRM1-216ENST00000449505 DBNDD2Q9BQY9 259 aa8.42□□□□□ -1.06
PBRM1-216ENST00000449505 NOP58Q9Y2X3 529 aaKnown RBP8.42□□□□□ -1.06
PBRM1-216ENST00000449505 ZBED9Q6R2W3 1325 aa8.42□□□□□ -1.06
PBRM1-216ENST00000449505 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 C19orf81C9J6K1 198 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 HMMRO75330 724 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 IDH1O75874 414 aaKnown RBP8.41□□□□□ -1.06
PBRM1-216ENST00000449505 HMGCRP04035 888 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 INHAP05111 366 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 CTGFP29279 349 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 HMGCS2P54868 508 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 PDE3AQ14432 1141 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 TTF1Q15361 905 aaPredicted RBP8.41□□□□□ -1.06
PBRM1-216ENST00000449505 MTFR1Q15390 333 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 SH3D19Q5HYK7 790 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 MAPKAPK5Q8IW41 473 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 CCAR1Q8IX12 1150 aaKnown RBP8.41□□□□□ -1.06
PBRM1-216ENST00000449505 ZNF384Q8TF68 577 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 U2AF1L4Q8WU68 220 aaKnown RBP8.41□□□□□ -1.06
PBRM1-216ENST00000449505 DPF3Q92784 378 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 SHISA4Q96DD7 197 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 WDR18Q9BV38 432 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 SNRKQ9NRH2 765 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
PBRM1-216ENST00000449505 CDK5RAP2Q96SN8 1893 aa8.4□□□□□ -1.06
PBRM1-216ENST00000449505 USP17L10C9JJH3 530 aa8.4□□□□□ -1.06
PBRM1-216ENST00000449505 CYP2E1P05181 493 aaPredicted RBP8.4□□□□□ -1.06
PBRM1-216ENST00000449505 USP5P45974 858 aa8.4□□□□□ -1.06
PBRM1-216ENST00000449505 USP14P54578 494 aa8.4□□□□□ -1.06
PBRM1-216ENST00000449505 BACE1P56817 501 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms